FFCP PHASE1:Mm9::chr14:55612574..55612583,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=139|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:55612574..55612583,-|id=chr14:55612574..55612583,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!2.30e-19!14;UBERON:0000117!2.30e-19!14;UBERON:0000171!2.30e-19!14;UBERON:0000170!2.30e-19!14;UBERON:0005597!2.30e-19!14;UBERON:0000118!2.30e-19!14;UBERON:0005153!1.67e-15!17;UBERON:0005178!1.67e-15!17;UBERON:0005181!1.67e-15!17;UBERON:0002224!1.67e-15!17;UBERON:0000915!1.67e-15!17;UBERON:0008947!1.67e-15!17;UBERON:0003258!1.67e-15!17;UBERON:0007100!7.41e-12!18;UBERON:0000948!7.41e-12!18;UBERON:0005498!7.41e-12!18;UBERON:0004140!7.41e-12!18;UBERON:0009881!7.41e-12!18;UBERON:0004141!7.41e-12!18;UBERON:0003084!7.41e-12!18;UBERON:0007005!7.41e-12!18;UBERON:0004139!7.41e-12!18;UBERON:0004291!7.41e-12!18;UBERON:0005157!7.42e-09!27;UBERON:0004535!8.07e-09!23;UBERON:0001009!8.07e-09!23|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.77e-26,14;UBERON:0000117,2.77e-26,14;UBERON:0000171,2.77e-26,14;UBERON:0000170,2.77e-26,14;UBERON:0005597,2.77e-26,14;UBERON:0000118,2.77e-26,14;UBERON:0005153,9.33e-22,17;UBERON:0005178,9.33e-22,17;UBERON:0005181,9.33e-22,17;UBERON:0002224,9.33e-22,17;UBERON:0000915,9.33e-22,17;UBERON:0008947,9.33e-22,17;UBERON:0003258,9.33e-22,17;UBERON:0005157,1.40e-18,20;UBERON:0000065,2.65e-09,41;UBERON:0001004,4.32e-09,42|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.23674473558521,0.787056926989615,0.925602677324269,0.697601834251224,2.41446061259657,0.467061369468678,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,2.1775813467436,2.85652369063216,2.53673742215138,1.10344600874334,1.7717175171902,0.318909537314974,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0.282328141245992,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p@chr14:55612574..55612583,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=139 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:55612574..55612583,- | |||
|id=chr14:55612574..55612583,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!2.30e-19!14;UBERON:0000117!2.30e-19!14;UBERON:0000171!2.30e-19!14;UBERON:0000170!2.30e-19!14;UBERON:0005597!2.30e-19!14;UBERON:0000118!2.30e-19!14;UBERON:0005153!1.67e-15!17;UBERON:0005178!1.67e-15!17;UBERON:0005181!1.67e-15!17;UBERON:0002224!1.67e-15!17;UBERON:0000915!1.67e-15!17;UBERON:0008947!1.67e-15!17;UBERON:0003258!1.67e-15!17;UBERON:0007100!7.41e-12!18;UBERON:0000948!7.41e-12!18;UBERON:0005498!7.41e-12!18;UBERON:0004140!7.41e-12!18;UBERON:0009881!7.41e-12!18;UBERON:0004141!7.41e-12!18;UBERON:0003084!7.41e-12!18;UBERON:0007005!7.41e-12!18;UBERON:0004139!7.41e-12!18;UBERON:0004291!7.41e-12!18;UBERON:0005157!7.42e-09!27;UBERON:0004535!8.07e-09!23;UBERON:0001009!8.07e-09!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.77e-26,14;UBERON:0000117,2.77e-26,14;UBERON:0000171,2.77e-26,14;UBERON:0000170,2.77e-26,14;UBERON:0005597,2.77e-26,14;UBERON:0000118,2.77e-26,14;UBERON:0005153,9.33e-22,17;UBERON:0005178,9.33e-22,17;UBERON:0005181,9.33e-22,17;UBERON:0002224,9.33e-22,17;UBERON:0000915,9.33e-22,17;UBERON:0008947,9.33e-22,17;UBERON:0003258,9.33e-22,17;UBERON:0005157,1.40e-18,20;UBERON:0000065,2.65e-09,41;UBERON:0001004,4.32e-09,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.23674473558521,0.787056926989615,0.925602677324269,0.697601834251224,2.41446061259657,0.467061369468678,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,2.1775813467436,2.85652369063216,2.53673742215138,1.10344600874334,1.7717175171902,0.318909537314974,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0.282328141245992,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr14:55612574..55612583,- | |||
}} |
Revision as of 02:31, 13 September 2013
Short description: | p@chr14:55612574..55612583, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:55612574..55612583, - |
Coexpression cluster: | MCL_coexpression_mm9:139 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 2.77e-26 | 14 |
respiratory tube | 2.77e-26 | 14 |
respiration organ | 2.77e-26 | 14 |
pair of lungs | 2.77e-26 | 14 |
lung primordium | 2.77e-26 | 14 |
lung bud | 2.77e-26 | 14 |
epithelial bud | 9.33e-22 | 17 |
thoracic cavity element | 9.33e-22 | 17 |
thoracic segment organ | 9.33e-22 | 17 |
thoracic cavity | 9.33e-22 | 17 |
thoracic segment of trunk | 9.33e-22 | 17 |
respiratory primordium | 9.33e-22 | 17 |
endoderm of foregut | 9.33e-22 | 17 |
epithelial fold | 1.40e-18 | 20 |
respiratory tract | 2.65e-09 | 41 |
respiratory system | 4.32e-09 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.