FFCP PHASE1:Hg19::chr4:169418195..169418211,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23022|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17068|TSSclassifier=S|UniProt=Q8WX93,B7ZMM5,B2RTX2|association_with_transcript=-5bp_to_ENST00000261509,ENST00000335742,NM_001166108,NM_016081,uc003iru.2,uc011cjx.1_5end|coexpression_cluster_id=C56|description=CAGE_peak_5_at_PALLD_5end|id=chr4:169418195..169418211,+|ontology_enrichment_celltype=CL:0000188!9.57e-10!9|ontology_enrichment_celltype_v019=CL:0000188;2.24e-11;9!CL:0000680;3.31e-10;7!CL:0000515;3.10e-09;3!CL:0000136;1.57e-07;13!CL:0000056;5.00e-07;4|ontology_enrichment_celltype_v019_2=CL:0000188,2.20e-11,9;CL:0000515,4.95e-07,4|ontology_enrichment_development_v019=UBERON:0005062;3.12e-13;4!UBERON:0007284;3.12e-13;4!CL:0000515;5.00e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.07e-07;2|ontology_enrichment_disease_v019_2=DOID:114,1.09e-07,2|ontology_enrichment_uberon=UBERON:0002385!9.86e-09!63;UBERON:0001015!9.86e-09!63;UBERON:0000383!9.86e-09!63;UBERON:0001134!1.67e-08!61;UBERON:0002036!1.67e-08!61;UBERON:0003082!1.67e-08!61;UBERON:0004290!3.15e-07!70|ontology_enrichment_uberon_v019=UBERON:0001134;1.52e-29;16!UBERON:0002036;1.52e-29;16!UBERON:0002385;1.15e-15;31!UBERON:0001015;1.15e-15;31!UBERON:0000383;1.15e-15;31!UBERON:0003978;9.71e-11;3!UBERON:0000946;9.71e-11;3!UBERON:0004151;1.64e-10;3!UBERON:0007100;3.77e-09;25!UBERON:0005090;6.91e-08;2!UBERON:0001630;6.91e-08;2!UBERON:0002133;1.32e-07;2!UBERON:0002081;1.59e-07;2!UBERON:0000341;1.87e-07;2!UBERON:0001474;4.32e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0003978,9.41e-11,3;UBERON:0009751,9.41e-11,3;UBERON:0000946,9.41e-11,3;UBERON:0002523,9.41e-11,3;UBERON:0005983,9.41e-11,3;UBERON:0002165,9.41e-11,3;UBERON:0002062,9.41e-11,3;UBERON:0007280,9.41e-11,3;UBERON:0004151,1.56e-10,3;UBERON:0007100,2.43e-08,27;UBERON:0005090,6.91e-08,2;UBERON:0001630,6.91e-08,2;UBERON:0004797,1.21e-07,7;UBERON:0002133,1.28e-07,2;UBERON:0002081,1.54e-07,2;UBERON:0010227,1.54e-07,2;UBERON:0000341,1.87e-07,2|phase1_expression=1.2717486548939,1.07050261945492,3.24195129420734,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,4.63432132846266,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.358779271377724,0.85422955527427,0.211931901159562,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,7.3504355692771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,4.21207677250628,3.41851673264075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,2.02693829334611,2.4657158706046,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0,0.300946099727719,0,0,0,0,0.434418072340414,0,13.7257369524342,0,0,0,0,0,0,2.72918588600655,0.920771839728375,0,7.04765320906355,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,30.126353925235,45.462734456244,0,0,0,0.96670718292122,1.23238893691716,2.6095624703442,4.13509717453592,0.537101224341368,2.0302337147992,4.68746450788555,57.5146950277923,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.447352215784832,0.667396566847634,0,0,0,0,0,0,0,5.12778627451629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94749775767882,0,0.0884575645033392,0,0,0,0,0,66.6139447257995,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0.330991955875499,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.16386819786103,0,1.58186518546373,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,105.848030082184,140.24617949515,14.3574604915363,41.5332321037901,86.7036617235873,47.0891775202351,295.204178106675,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,55.7462354571226,45.6843459552148,0,0,0,0,2.39460383124975,0,3.40776043570843,0,0,0,0,0,0,0,0.106787412567695,0.943225830597996,0,0,0,0,0,4.35214242695579,5.5151776684994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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23022 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17068 | |||
|TSSclassifier=S | |||
|UniProt=Q8WX93,B7ZMM5,B2RTX2 | |||
|association_with_transcript=-5bp_to_ENST00000261509,ENST00000335742,NM_001166108,NM_016081,uc003iru.2,uc011cjx.1_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_5_at_PALLD_5end | |||
|id=chr4:169418195..169418211,+ | |||
|ontology_enrichment_celltype=CL:0000188!9.57e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.24e-11;9!CL:0000680;3.31e-10;7!CL:0000515;3.10e-09;3!CL:0000136;1.57e-07;13!CL:0000056;5.00e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.20e-11,9;CL:0000515,4.95e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.12e-13;4!UBERON:0007284;3.12e-13;4!CL:0000515;5.00e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.07e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.09e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002385!9.86e-09!63;UBERON:0001015!9.86e-09!63;UBERON:0000383!9.86e-09!63;UBERON:0001134!1.67e-08!61;UBERON:0002036!1.67e-08!61;UBERON:0003082!1.67e-08!61;UBERON:0004290!3.15e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.52e-29;16!UBERON:0002036;1.52e-29;16!UBERON:0002385;1.15e-15;31!UBERON:0001015;1.15e-15;31!UBERON:0000383;1.15e-15;31!UBERON:0003978;9.71e-11;3!UBERON:0000946;9.71e-11;3!UBERON:0004151;1.64e-10;3!UBERON:0007100;3.77e-09;25!UBERON:0005090;6.91e-08;2!UBERON:0001630;6.91e-08;2!UBERON:0002133;1.32e-07;2!UBERON:0002081;1.59e-07;2!UBERON:0000341;1.87e-07;2!UBERON:0001474;4.32e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,9.41e-11,3;UBERON:0009751,9.41e-11,3;UBERON:0000946,9.41e-11,3;UBERON:0002523,9.41e-11,3;UBERON:0005983,9.41e-11,3;UBERON:0002165,9.41e-11,3;UBERON:0002062,9.41e-11,3;UBERON:0007280,9.41e-11,3;UBERON:0004151,1.56e-10,3;UBERON:0007100,2.43e-08,27;UBERON:0005090,6.91e-08,2;UBERON:0001630,6.91e-08,2;UBERON:0004797,1.21e-07,7;UBERON:0002133,1.28e-07,2;UBERON:0002081,1.54e-07,2;UBERON:0010227,1.54e-07,2;UBERON:0000341,1.87e-07,2 | |||
|phase1_expression=1.2717486548939,1.07050261945492,3.24195129420734,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,4.63432132846266,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.358779271377724,0.85422955527427,0.211931901159562,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,7.3504355692771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,4.21207677250628,3.41851673264075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,2.02693829334611,2.4657158706046,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0,0.300946099727719,0,0,0,0,0.434418072340414,0,13.7257369524342,0,0,0,0,0,0,2.72918588600655,0.920771839728375,0,7.04765320906355,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,30.126353925235,45.462734456244,0,0,0,0.96670718292122,1.23238893691716,2.6095624703442,4.13509717453592,0.537101224341368,2.0302337147992,4.68746450788555,57.5146950277923,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.447352215784832,0.667396566847634,0,0,0,0,0,0,0,5.12778627451629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94749775767882,0,0.0884575645033392,0,0,0,0,0,66.6139447257995,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0.330991955875499,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.16386819786103,0,1.58186518546373,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,105.848030082184,140.24617949515,14.3574604915363,41.5332321037901,86.7036617235873,47.0891775202351,295.204178106675,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,55.7462354571226,45.6843459552148,0,0,0,0,2.39460383124975,0,3.40776043570843,0,0,0,0,0,0,0,0.106787412567695,0.943225830597996,0,0,0,0,0,4.35214242695579,5.5151776684994,6.73960268879615,0.327872630709804,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0.50313580350515,1.77962244319307,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,1.14241563650639,0,0.181848659202559,0,0,0.398095888698616,46.4032207009258,0,0,8.83294287600557,0.385239660814607,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1160556621441,0,0,0,0,0,0,0,0,0,0,0,0,0,6.48349562294184,0,1.19349733269765,0,0,0,0,0,0,0,0,0,0,0,0,20.3446583139611,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,23.1231502162431,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,187.106933947302,88.2900138963724,41.7533195281752,22.8284166737796,0,0,0,0,0,0.301925687133347,0.154348316215889,0,0,0,0,0,0,0.8453114551668,0.169927114687817,0,0,0,0,0,0,0,1.83491713361816,0,0.157771562193185,0,0,0.5290268405154,0,0,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0,0,0,0,21.963100135801,35.2335358566336,0.0645889098360061,0.0620747142958579,0,1.14564884900697,3.84022659020617,42.2370490920105,61.2597608942653,1.95320953742304,0.717222053926764,14.3043953314786,0,1.70763753404345,0,0,14.0784565442073,0.122241444182866,0,0,2.21401172950129,0 | |||
|short_description=p5@PALLD | |||
}} |
Revision as of 03:17, 13 September 2013
Short description: | p5@PALLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PALLD_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -5bp_to_ENST00000261509, ENST00000335742, NM_001166108, NM_016081, uc003iru.2, uc011cjx.1_5end |
EntrezGene: | PALLD |
HGNC: | 17068 |
UniProt: | Q8WX93B7ZMM5B2RTX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.20e-11 | 9 |
skeletal muscle myoblast | 4.95e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
valve | 9.41e-11 | 3 |
cardiac mesenchyme | 9.41e-11 | 3 |
cardial valve | 9.41e-11 | 3 |
tunica intima | 9.41e-11 | 3 |
heart layer | 9.41e-11 | 3 |
endocardium | 9.41e-11 | 3 |
endocardial cushion | 9.41e-11 | 3 |
presumptive endocardium | 9.41e-11 | 3 |
cardiac chamber | 1.56e-10 | 3 |
primary circulatory organ | 2.43e-08 | 27 |
muscle structure | 6.91e-08 | 2 |
muscle organ | 6.91e-08 | 2 |
blood vessel layer | 1.21e-07 | 7 |
atrioventricular valve | 1.28e-07 | 2 |
cardiac atrium | 1.54e-07 | 2 |
future cardiac atrium | 1.54e-07 | 2 |
throat | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.09e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.