FFCP PHASE1:Mm9::chr15:56527038..56527040,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=52|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:56527038..56527040,+|id=chr15:56527038..56527040,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.70e-10,3;CL:0002202,1.70e-10,3;CL:0000069,1.70e-10,3;CL:0002632,1.70e-10,3;CL:0002368,1.70e-10,3;CL:0000307,1.70e-10,3;CL:0000377,1.70e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.70e-10,3;UBERON:0001005,1.70e-10,3;UBERON:0007196,1.70e-10,3;UBERON:0001558,1.70e-10,3;UBERON:0002102,2.95e-10,7;UBERON:0004710,2.95e-10,7;UBERON:0005419,2.95e-10,7;UBERON:0005417,2.95e-10,7;UBERON:0005729,2.95e-10,7;UBERON:0010708,6.08e-09,8;UBERON:0000026,2.30e-08,12;UBERON:0004708,2.30e-08,12;UBERON:0002101,2.30e-08,12;UBERON:0004357,2.30e-08,12;UBERON:0004347,2.30e-08,12;UBERON:0005732,2.30e-08,12;UBERON:0005733,2.30e-08,12;UBERON:0010707,1.13e-07,13|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0.56276261003168,0.30559649555362,0,0.284743361598206,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.14084341977668,0,2.54805239706646,7.11066703153331,1.5154372870785,2.53359865475099,2.02209778005913,0.22836775943812,0.258937883647172,0,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0,0,1.61766849947409,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0.251308704225729,0.173824320192276,0.255715457330331,0,0.324482526135515,1.52759045775474,0.497627882440372,0,0.210441855886474,0.130120442962704,0.689706313300419,0.720248519221397,0.60281927134286,0.340182495756639,0.896796041993948,0.187403449119458,0.258703370739016,0.215567992932842,1.13463648100692,1.05570674498369,0.876782929710299,1.39023624612799,1.0447564995665,1.64625709126355,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0,0.23674473558521,0,0.771335564436891,0.697601834251224,0,0,0.822799249567402,0.164167464079095,0.405344047729279,0,0.219550115291051,0,0,0.205809224758569,0,0,0.213288250535234,1.16118335930219,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.799739588268102,0,0.610953983535943,0.387904974335251,0.280543279561274,0.189709611372772,0,0,0,0,0.500535317148282,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0,0.234690248288502,0.502518772325447,0.238043640886014,0.780534591431195,0.472905432318573,0.44292937929755,0.318909537314974,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0.827810238914197,0,0.234423373184406,0.163934945376675,0,0,0.780877488593277,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0,0,0.890328018336276,1.14020871547503,0.659880491890142,0,0.242780636154981,0.906970670894253,0,0,0.614870295887855,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,2.30840754118072,0.322928853391811,0.663442174209714,0.477489376012546,0.820704498725306,0.291480836629851,0.370850604021019,0,0.206386867963223,0.370389054739423,0,0,0.457556346413045,0,0,0,0.954670618015114,0.632671987162271,0.813277868507395,0.324016022465404,0.627264888043406,0.218362563746178,0.539457385539283,0.495920734352016,0.523511883968059,0,0,0,0.448549638131936,0.330916980914195,0.583353565032143,0.516639293910924,0.675824501963113,0.58678619322877,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0.302899349844443,0,0.100826185136841,0.292373642219257,0.0962118416403295,0,0.680191150845634,0,0,0,0.579568782096571,0.750729901804728,0.549454872801795,0.214368379079066,0,0,0.460325236507177,0,0.68741272937475,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0.682934423016537,0.729320151204882,0.209613162627982,0.919217542250071,1.11123363900808,1.03017528619447,0.64183841918363,1.01078884705519,0.50695859978048,0.754505365544305,0.936415074698824,0.512201219238954,0.861532034334199,0,0.811190281613988,1.92909220463705,1.23625770240992,1.17759136107518,1.02860775715625,1.4198064492747,0.953744759789284,0.436039249896986,1.03520318456864,0.592302255241736,1.46342378298218,1.57841826862706,1.7654534799962,1.68342681497322,1.30498519936592,0.886540341380071,0.818462086339379,1.39443157067369,0.385813221962283,0.999242311751784,0.233931608445408,0.859484216193193,0.956441660344217,0.882365676478062,0.927471342481686|short_description=p@chr15:56527038..56527040,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:56527038..56527040,+ | |||
|id=chr15:56527038..56527040,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.70e-10,3;CL:0002202,1.70e-10,3;CL:0000069,1.70e-10,3;CL:0002632,1.70e-10,3;CL:0002368,1.70e-10,3;CL:0000307,1.70e-10,3;CL:0000377,1.70e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.70e-10,3;UBERON:0001005,1.70e-10,3;UBERON:0007196,1.70e-10,3;UBERON:0001558,1.70e-10,3;UBERON:0002102,2.95e-10,7;UBERON:0004710,2.95e-10,7;UBERON:0005419,2.95e-10,7;UBERON:0005417,2.95e-10,7;UBERON:0005729,2.95e-10,7;UBERON:0010708,6.08e-09,8;UBERON:0000026,2.30e-08,12;UBERON:0004708,2.30e-08,12;UBERON:0002101,2.30e-08,12;UBERON:0004357,2.30e-08,12;UBERON:0004347,2.30e-08,12;UBERON:0005732,2.30e-08,12;UBERON:0005733,2.30e-08,12;UBERON:0010707,1.13e-07,13 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0.56276261003168,0.30559649555362,0,0.284743361598206,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.14084341977668,0,2.54805239706646,7.11066703153331,1.5154372870785,2.53359865475099,2.02209778005913,0.22836775943812,0.258937883647172,0,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0,0,1.61766849947409,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0.251308704225729,0.173824320192276,0.255715457330331,0,0.324482526135515,1.52759045775474,0.497627882440372,0,0.210441855886474,0.130120442962704,0.689706313300419,0.720248519221397,0.60281927134286,0.340182495756639,0.896796041993948,0.187403449119458,0.258703370739016,0.215567992932842,1.13463648100692,1.05570674498369,0.876782929710299,1.39023624612799,1.0447564995665,1.64625709126355,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0,0.23674473558521,0,0.771335564436891,0.697601834251224,0,0,0.822799249567402,0.164167464079095,0.405344047729279,0,0.219550115291051,0,0,0.205809224758569,0,0,0.213288250535234,1.16118335930219,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.799739588268102,0,0.610953983535943,0.387904974335251,0.280543279561274,0.189709611372772,0,0,0,0,0.500535317148282,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0,0.234690248288502,0.502518772325447,0.238043640886014,0.780534591431195,0.472905432318573,0.44292937929755,0.318909537314974,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0.827810238914197,0,0.234423373184406,0.163934945376675,0,0,0.780877488593277,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0,0,0.890328018336276,1.14020871547503,0.659880491890142,0,0.242780636154981,0.906970670894253,0,0,0.614870295887855,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,2.30840754118072,0.322928853391811,0.663442174209714,0.477489376012546,0.820704498725306,0.291480836629851,0.370850604021019,0,0.206386867963223,0.370389054739423,0,0,0.457556346413045,0,0,0,0.954670618015114,0.632671987162271,0.813277868507395,0.324016022465404,0.627264888043406,0.218362563746178,0.539457385539283,0.495920734352016,0.523511883968059,0,0,0,0.448549638131936,0.330916980914195,0.583353565032143,0.516639293910924,0.675824501963113,0.58678619322877,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0.302899349844443,0,0.100826185136841,0.292373642219257,0.0962118416403295,0,0.680191150845634,0,0,0,0.579568782096571,0.750729901804728,0.549454872801795,0.214368379079066,0,0,0.460325236507177,0,0.68741272937475,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0.682934423016537,0.729320151204882,0.209613162627982,0.919217542250071,1.11123363900808,1.03017528619447,0.64183841918363,1.01078884705519,0.50695859978048,0.754505365544305,0.936415074698824,0.512201219238954,0.861532034334199,0,0.811190281613988,1.92909220463705,1.23625770240992,1.17759136107518,1.02860775715625,1.4198064492747,0.953744759789284,0.436039249896986,1.03520318456864,0.592302255241736,1.46342378298218,1.57841826862706,1.7654534799962,1.68342681497322,1.30498519936592,0.886540341380071,0.818462086339379,1.39443157067369,0.385813221962283,0.999242311751784,0.233931608445408,0.859484216193193,0.956441660344217,0.882365676478062,0.927471342481686 | |||
|short_description=p@chr15:56527038..56527040,+ | |||
}} |
Revision as of 10:35, 13 September 2013
Short description: | p@chr15:56527038..56527040, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:56527038..56527040, + |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.70e-10 | 3 |
epithelial cell of tracheobronchial tree | 1.70e-10 | 3 |
branched duct epithelial cell | 1.70e-10 | 3 |
epithelial cell of lower respiratory tract | 1.70e-10 | 3 |
respiratory epithelial cell | 1.70e-10 | 3 |
tracheal epithelial cell | 1.70e-10 | 3 |
tracheoblast | 1.70e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.70e-10 | 3 |
respiratory airway | 1.70e-10 | 3 |
tracheobronchial tree | 1.70e-10 | 3 |
lower respiratory tract | 1.70e-10 | 3 |
forelimb | 2.95e-10 | 7 |
pectoral appendage | 2.95e-10 | 7 |
pectoral appendage bud | 2.95e-10 | 7 |
forelimb bud | 2.95e-10 | 7 |
forelimb/pectoral fin field | 2.95e-10 | 7 |
pectoral complex | 6.08e-09 | 8 |
appendage | 2.30e-08 | 12 |
paired limb/fin | 2.30e-08 | 12 |
limb | 2.30e-08 | 12 |
paired limb/fin bud | 2.30e-08 | 12 |
limb bud | 2.30e-08 | 12 |
limb/fin field | 2.30e-08 | 12 |
limb field | 2.30e-08 | 12 |
appendage girdle complex | 1.13e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.