FFCP PHASE1:Hg19::chr4:37613348..37613353,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:37613348..37613353,-|id=chr4:37613348..37613353,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000115;4.20e-16;36!CL:0002139;2.86e-12;24!CL:0002138;4.39e-12;6!CL:0002078;1.26e-11;45!CL:0002188;1.83e-09;5!CL:0000771;7.65e-07;2!CL:0000213;8.37e-07;58!CL:0000215;8.37e-07;58!CL:0002262;9.61e-07;2!CL:0002545;9.61e-07;2!CL:1000398;9.61e-07;2!CL:1000746;9.63e-07;7!CL:1000612;9.63e-07;7|ontology_enrichment_celltype_v019_2=CL:0000115,3.58e-19,36;CL:0002078,1.99e-18,45;CL:0000213,3.76e-13,58;CL:0000215,3.76e-13,58;CL:0002139,1.72e-12,24;CL:0005020,5.07e-12,6;CL:0002138,5.07e-12,6;CL:0005022,5.07e-12,6;CL:0002188,1.71e-09,5;CL:0002545,4.29e-07,2;CL:0002262,6.26e-07,2;CL:1000398,6.26e-07,2;CL:0000771,6.63e-07,2;CL:1000746,9.19e-07,7;CL:1000612,9.19e-07,7|ontology_enrichment_development_v019=CL:0005022;4.39e-12;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002417!6.31e-07!61;UBERON:0000916!6.31e-07!61;UBERON:0005172!6.46e-07!55;UBERON:0005173!6.46e-07!55;UBERON:0000353!7.33e-07!17|ontology_enrichment_uberon_v019=UBERON:0001473;1.78e-12;8!UBERON:0004536;1.78e-12;8!UBERON:0006558;1.78e-12;8!UBERON:0002465;7.99e-10;10!UBERON:0001281;9.61e-07;2!UBERON:0003497;9.61e-07;2!UBERON:0003909;9.61e-07;2!UBERON:0005800;9.61e-07;2!UBERON:0003835;9.61e-07;2!UBERON:0001515;9.61e-07;2!UBERON:0000074;9.63e-07;7!UBERON:0001229;9.63e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.64e-12,8;UBERON:0004536,1.64e-12,8;UBERON:0006558,1.64e-12,8;UBERON:0002465,7.49e-10,10;UBERON:0005800,4.29e-07,2;UBERON:0001515,4.29e-07,2;UBERON:0000055,4.63e-07,68;UBERON:0001281,6.26e-07,2;UBERON:0003497,6.26e-07,2;UBERON:0003909,6.26e-07,2;UBERON:0003835,6.26e-07,2;UBERON:0010532,9.19e-07,7;UBERON:0000074,9.19e-07,7;UBERON:0001229,9.19e-07,7;UBERON:0001230,9.19e-07,7;UBERON:0003220,9.19e-07,7;UBERON:0005749,9.19e-07,7;UBERON:0004199,9.19e-07,7;UBERON:0004209,9.19e-07,7;UBERON:0004198,9.19e-07,7|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,1.0007329835313,0,0.872338524100369,0,0,0,0.737201809504527,2.09340350391728,0.436882744260345,0,1.48519623552056,0.662794751455832,0.672325146451775,0,0.730310090387373,1.46379839637152,0.492484232307152,0.204000691244253,0,0.85870796139317,1.09499540058307,0,0,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,0.553995408531877,0.601633342410425,0.868043482863407,0.671746422719773,0,0.257575567634187,0.726991193897824,0,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,0,0,0.709446689665756,0.689491361473237,0,0,0.752969358170419,0.272906150057846,0,1.53041946185451,0,0.639337125799041,0.329851300186716,0.199463657621632,0,1.16083695451434,1.13477044938228,0,1.7587406567972,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0.22465726229299,0.600707571366025,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0.393419540227666,0.786021525498329,0.411202997999018,0,0.32592226663359,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.390178042679635,0.493313713811028,0.552700035571697,0,0,0,0,0.453237370790265,0,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0,0,0.201606743224732,1.06976078313403,0.289648807765598,0,0,0.511450247374121,0.361439152384566,0,0.144846518960824,0,0,0.567208902984407,0.221729397462564,0.087834785693126,0.0654895377488563,0,0.741568885568859,0,0.348259474598534,0.26591592103773,0.238490624305342,1.14398982156026,0.371457501329565,0.993812036833525,0,0.347140501607594,0,0,2.20094433552054,0,2.06733407335463,2.13459757612026,0,3.22263453687318,0,0.732186172644509,1.83831540172934,2.43042584364528,1.51809538082936,1.34717623575702,0.337834441449967,0,0,0.366403487860815,1.31780417436063,3.87780264148325,0.436094052142534,0.993943903390637,0.25326102332916,0,0,0,0.560677600142307,0,0.74000264525148,0,0.269421344139376,0.326923806226917,0.302714855289863,0,0,0.312160076830321,0.570471821544449,0,0,0.809364721840658,0.421352420106746,0,0.491337269247072,0.103325781175765,0,1.23633464639278,0,1.43723628363248,0.336672227908132,0,0,0.438977620880838,0.919463387397059,0.600952235626387,0.453728732640084,0.179389635688862,0.427114777637135,0.423863802319124,0,0.206105058476878,0,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0.386521706326594,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.354920400119532,0.168584690078102,0,0.661763836394364,0,0.71181185733329,0.134831308160164,0,0.38474715694639,2.95262181849859,1.40241773803446,0.8231480226628,2.94017422771084,0,0.98282721667762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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:37613348..37613353,- | |||
|id=chr4:37613348..37613353,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.20e-16;36!CL:0002139;2.86e-12;24!CL:0002138;4.39e-12;6!CL:0002078;1.26e-11;45!CL:0002188;1.83e-09;5!CL:0000771;7.65e-07;2!CL:0000213;8.37e-07;58!CL:0000215;8.37e-07;58!CL:0002262;9.61e-07;2!CL:0002545;9.61e-07;2!CL:1000398;9.61e-07;2!CL:1000746;9.63e-07;7!CL:1000612;9.63e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.58e-19,36;CL:0002078,1.99e-18,45;CL:0000213,3.76e-13,58;CL:0000215,3.76e-13,58;CL:0002139,1.72e-12,24;CL:0005020,5.07e-12,6;CL:0002138,5.07e-12,6;CL:0005022,5.07e-12,6;CL:0002188,1.71e-09,5;CL:0002545,4.29e-07,2;CL:0002262,6.26e-07,2;CL:1000398,6.26e-07,2;CL:0000771,6.63e-07,2;CL:1000746,9.19e-07,7;CL:1000612,9.19e-07,7 | |||
|ontology_enrichment_development_v019=CL:0005022;4.39e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002417!6.31e-07!61;UBERON:0000916!6.31e-07!61;UBERON:0005172!6.46e-07!55;UBERON:0005173!6.46e-07!55;UBERON:0000353!7.33e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.78e-12;8!UBERON:0004536;1.78e-12;8!UBERON:0006558;1.78e-12;8!UBERON:0002465;7.99e-10;10!UBERON:0001281;9.61e-07;2!UBERON:0003497;9.61e-07;2!UBERON:0003909;9.61e-07;2!UBERON:0005800;9.61e-07;2!UBERON:0003835;9.61e-07;2!UBERON:0001515;9.61e-07;2!UBERON:0000074;9.63e-07;7!UBERON:0001229;9.63e-07;7 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,1.0007329835313,0,0.872338524100369,0,0,0,0.737201809504527,2.09340350391728,0.436882744260345,0,1.48519623552056,0.662794751455832,0.672325146451775,0,0.730310090387373,1.46379839637152,0.492484232307152,0.204000691244253,0,0.85870796139317,1.09499540058307,0,0,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,0.553995408531877,0.601633342410425,0.868043482863407,0.671746422719773,0,0.257575567634187,0.726991193897824,0,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,0,0,0.709446689665756,0.689491361473237,0,0,0.752969358170419,0.272906150057846,0,1.53041946185451,0,0.639337125799041,0.329851300186716,0.199463657621632,0,1.16083695451434,1.13477044938228,0,1.7587406567972,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0.22465726229299,0.600707571366025,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0.393419540227666,0.786021525498329,0.411202997999018,0,0.32592226663359,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.390178042679635,0.493313713811028,0.552700035571697,0,0,0,0,0.453237370790265,0,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0,0,0.201606743224732,1.06976078313403,0.289648807765598,0,0,0.511450247374121,0.361439152384566,0,0.144846518960824,0,0,0.567208902984407,0.221729397462564,0.087834785693126,0.0654895377488563,0,0.741568885568859,0,0.348259474598534,0.26591592103773,0.238490624305342,1.14398982156026,0.371457501329565,0.993812036833525,0,0.347140501607594,0,0,2.20094433552054,0,2.06733407335463,2.13459757612026,0,3.22263453687318,0,0.732186172644509,1.83831540172934,2.43042584364528,1.51809538082936,1.34717623575702,0.337834441449967,0,0,0.366403487860815,1.31780417436063,3.87780264148325,0.436094052142534,0.993943903390637,0.25326102332916,0,0,0,0.560677600142307,0,0.74000264525148,0,0.269421344139376,0.326923806226917,0.302714855289863,0,0,0.312160076830321,0.570471821544449,0,0,0.809364721840658,0.421352420106746,0,0.491337269247072,0.103325781175765,0,1.23633464639278,0,1.43723628363248,0.336672227908132,0,0,0.438977620880838,0.919463387397059,0.600952235626387,0.453728732640084,0.179389635688862,0.427114777637135,0.423863802319124,0,0.206105058476878,0,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0.386521706326594,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.354920400119532,0.168584690078102,0,0.661763836394364,0,0.71181185733329,0.134831308160164,0,0.38474715694639,2.95262181849859,1.40241773803446,0.8231480226628,2.94017422771084,0,0.982827216677626,0.590789906681404,0,0.491953754172454,0,0.329250856225877,0,0.402115889646523,0.185176890317059,0.325808305310325,0,0,0.34779121492523,0,1.01056513432752,1.85194205030644,2.66355813128438,0,0,0.738651018262192,0.234004265139238,0.148631162288728,0,0,0,1.16426079513703,0.871901815541886,0,0.492663237895943,0.088048434013226,0,0,0.25248486685276,0.380987365753014,0,0,0,0.205654985406647,0.901029173531752,0,1.00917975910825,0,0.5867062865676,0.129271715757778,0,0,0.26593811658487,0,0,0,0.799266537048298,0.285955987316295,0.542621605391443,0,0.325736184293735,0.710783897485092,0.791951872933429,0.602878754119172,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.723906533337896,0.205476322550383,0,0,0,1.07813787429759,0.128343036279748,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0.49076596687656,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.587403472388222,0.343143423810856,0.413536052245775,0.647142602455851,0,0.303127571446259,0,0,0.496215615637554,0.153461973288062,0.561320188866147,0.640695746278505,0,0.321707842287215,1.48418066444991,0.308419387605311,0.177561725313127,0.328508624055237,0.519254429183621,0.464841513839837,0.483437798366489,0,0.460404944679482,0.229628896329213,1.0925470080403,0.131124414959424,0.451199612907412,0.539107359730903,0.784349769176855,1.46139224653261,0.316654886678627,1.13733384070897,2.38131187387122,0.431831832204279,1.54227252690289,0.541892875087706,0.501689773854853,0.509752546090077,0.831076008928724,0.223874754722178,0,0.261435451024901,0.512900250232778,0.984043937099117,1.30151357865721,0.309123034943167,0.183138929636687,0.082509499920588,0,0,0,0.773365746336976,0,0.15350367472613,0.275673144969061,0.214840489736547,0.290033387828457,0.0852266274161009,1.51354460599453,0.165284915360978,0.384380134730212,0,0.30347334256665,0.929691098594572,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0,0,0,0,0.48763373908959,0.731140468893853,0,0.136499911407986,0.707027159768564,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0.573645408816206,0.0982490410131212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| |||
|short_description=p@chr4:37613348..37613353,- | |||
}} |
Revision as of 10:46, 13 September 2013
Short description: | p@chr4:37613348..37613353, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:37613348..37613353, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.58e-19 | 36 |
meso-epithelial cell | 1.99e-18 | 45 |
lining cell | 3.76e-13 | 58 |
barrier cell | 3.76e-13 | 58 |
endothelial cell of vascular tree | 1.72e-12 | 24 |
lymphangioblast | 5.07e-12 | 6 |
endothelial cell of lymphatic vessel | 5.07e-12 | 6 |
vascular lymphangioblast | 5.07e-12 | 6 |
glomerular endothelial cell | 1.71e-09 | 5 |
thoracic aorta endothelial cell | 4.29e-07 | 2 |
endothelial cell of sinusoid | 6.26e-07 | 2 |
endothelial cell of hepatic sinusoid | 6.26e-07 | 2 |
eosinophil | 6.63e-07 | 2 |
glomerular cell | 9.19e-07 | 7 |
kidney corpuscule cell | 9.19e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.64e-12 | 8 |
lymph vasculature | 1.64e-12 | 8 |
lymphatic part of lymphoid system | 1.64e-12 | 8 |
lymphoid system | 7.49e-10 | 10 |
segment of aorta | 4.29e-07 | 2 |
thoracic aorta | 4.29e-07 | 2 |
vessel | 4.63e-07 | 68 |
hepatic sinusoid | 6.26e-07 | 2 |
abdomen blood vessel | 6.26e-07 | 2 |
sinusoid | 6.26e-07 | 2 |
abdominal segment blood vessel | 6.26e-07 | 2 |
primitive nephron | 9.19e-07 | 7 |
renal glomerulus | 9.19e-07 | 7 |
renal corpuscle | 9.19e-07 | 7 |
glomerular capsule | 9.19e-07 | 7 |
metanephric mesenchyme | 9.19e-07 | 7 |
glomerular tuft | 9.19e-07 | 7 |
S-shaped body | 9.19e-07 | 7 |
renal vesicle | 9.19e-07 | 7 |
comma-shaped body | 9.19e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.