FFCP PHASE1:Mm9::chr17:45729364..45729401,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=63959|HGNC=|MCL_coexpression_id=10|UniProt=Q3TCZ2,Q9JIM1|association_with_transcript=-22bp_to_NM_022880,uc008cra.2_5end|description=CAGE_peak_11_at_Slc29a1_5end|id=chr17:45729364..45729401,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!8.86e-08!18;UBERON:0000948!8.86e-08!18;UBERON:0005498!8.86e-08!18;UBERON:0004140!8.86e-08!18;UBERON:0009881!8.86e-08!18;UBERON:0004141!8.86e-08!18;UBERON:0003084!8.86e-08!18;UBERON:0007005!8.86e-08!18;UBERON:0004139!8.86e-08!18;UBERON:0004291!8.86e-08!18;UBERON:0004535!9.46e-07!23;UBERON:0001009!9.46e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.24e-14,18;UBERON:0000948,1.24e-14,18;UBERON:0005498,1.24e-14,18;UBERON:0004140,1.24e-14,18;UBERON:0009881,1.24e-14,18;UBERON:0004141,1.24e-14,18;UBERON:0003084,1.24e-14,18;UBERON:0007005,1.24e-14,18;UBERON:0004139,1.24e-14,18;UBERON:0004291,1.24e-14,18;UBERON:0004535,1.29e-14,23;UBERON:0001009,1.29e-14,23;UBERON:0003914,8.78e-13,47;UBERON:0004872,3.63e-09,33;UBERON:0005418,2.12e-07,5;UBERON:0002472,2.12e-07,5;UBERON:0008784,2.12e-07,5;UBERON:0006058,2.12e-07,5;UBERON:0004709,2.12e-07,5;UBERON:0002529,2.12e-07,5;UBERON:0010538,2.12e-07,5;UBERON:0005420,2.12e-07,5;UBERON:0010758,2.12e-07,5;UBERON:0000978,2.12e-07,5;UBERON:0002103,2.12e-07,5;UBERON:0000376,2.12e-07,5;UBERON:0000154,2.12e-07,5;UBERON:0010709,2.12e-07,5;UBERON:0005730,2.12e-07,5|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,1.65993539510744,1.22885226604995,0,0,0,2.23346399201105,2.25105044012672,0.30559649555362,0,0.142371680799103,0,0,0,1.15945795480671,1.72084775396277,0,1.61910957491345,1.94932925234301,0.448026887097336,0.983110940922263,0.340860645156116,1.29893002301434,0.35333957451034,0,0,0,0,0,0,0,0.45673551887624,0,1.1875371125186,0,0.304465478312141,0,0,0.352766121407114,1.13099932196708,0,1.3013942122792,0.884610551949874,3.88240439873782,3.09178125844551,3.39412677194655,0,0.878342391034642,0.628340120440365,0.510914110417183,0,0,0,1.49790639404823,0.457500602818626,0,0.521472960576829,0.255715457330331,1.24672826735736,1.62241263067758,0,0.746441823660558,0.252722758433675,0.631325567659422,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.562210347358373,1.55222022443409,0,0,0,0,0.278047249225598,0.696504333044333,0.823128545631774,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,1.42046841351126,0.196764231747404,1.23413690309903,2.55787339225449,1.87791380979733,1.40118410840603,3.62031669809657,4.59668899421467,9.1607754786817,10.6725990820493,9.44065495751518,8.18659154438268,0.841159794256509,0,0,0,0,0,0,0,0,0.380451252225118,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0.648414149624083,0.398282546508734,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0.627994911365499,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,4.54641980304801,1.4351793081753,0.964887042726734,0,0,0,0,0,0.335012514883631,0,0.195133647857799,0.315270288212382,0,0,0.983179888294428,0.172684981865896,0.433947175744535,0,0,0,0.551873492609465,0.642202359951168,0.586058432961016,0,2.7771801992481,0.315508219416257,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,3.06395645178409,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0,0.441056796109924,0.49465875882444,0.322928853391811,0.241251699712623,0,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.269728692769641,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,3.62768613784338,0,0,0,0.965947970160952,0,0.183151624267265,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0.962757628775446,0.758091635291392,0.25347929989024,0.377252682772152,0.842773567228942,0.832326981263301,0.689225627467359,0.476293691283074,0.695305955669133,0.578727661391115,0.824171801606613,1.03039244094078,1.37147700954166,0.177475806159338,1.66905332963125,0.145346416632329,0.846984423737976,0.423073039458382,0.548783918618318,0.263069711437843,0.407412341537585,0,0.593175090620871,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.701794825336225,0.214871054048298,1.3390183244819,3.75005412503176,4.40548887678801|short_description=p11@Slc29a1}} | ||
|EntrezGene=63959 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|UniProt=Q3TCZ2,Q9JIM1 | |||
|association_with_transcript=-22bp_to_NM_022880,uc008cra.2_5end | |||
|description=CAGE_peak_11_at_Slc29a1_5end | |||
|id=chr17:45729364..45729401,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.86e-08!18;UBERON:0000948!8.86e-08!18;UBERON:0005498!8.86e-08!18;UBERON:0004140!8.86e-08!18;UBERON:0009881!8.86e-08!18;UBERON:0004141!8.86e-08!18;UBERON:0003084!8.86e-08!18;UBERON:0007005!8.86e-08!18;UBERON:0004139!8.86e-08!18;UBERON:0004291!8.86e-08!18;UBERON:0004535!9.46e-07!23;UBERON:0001009!9.46e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.24e-14,18;UBERON:0000948,1.24e-14,18;UBERON:0005498,1.24e-14,18;UBERON:0004140,1.24e-14,18;UBERON:0009881,1.24e-14,18;UBERON:0004141,1.24e-14,18;UBERON:0003084,1.24e-14,18;UBERON:0007005,1.24e-14,18;UBERON:0004139,1.24e-14,18;UBERON:0004291,1.24e-14,18;UBERON:0004535,1.29e-14,23;UBERON:0001009,1.29e-14,23;UBERON:0003914,8.78e-13,47;UBERON:0004872,3.63e-09,33;UBERON:0005418,2.12e-07,5;UBERON:0002472,2.12e-07,5;UBERON:0008784,2.12e-07,5;UBERON:0006058,2.12e-07,5;UBERON:0004709,2.12e-07,5;UBERON:0002529,2.12e-07,5;UBERON:0010538,2.12e-07,5;UBERON:0005420,2.12e-07,5;UBERON:0010758,2.12e-07,5;UBERON:0000978,2.12e-07,5;UBERON:0002103,2.12e-07,5;UBERON:0000376,2.12e-07,5;UBERON:0000154,2.12e-07,5;UBERON:0010709,2.12e-07,5;UBERON:0005730,2.12e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,1.65993539510744,1.22885226604995,0,0,0,2.23346399201105,2.25105044012672,0.30559649555362,0,0.142371680799103,0,0,0,1.15945795480671,1.72084775396277,0,1.61910957491345,1.94932925234301,0.448026887097336,0.983110940922263,0.340860645156116,1.29893002301434,0.35333957451034,0,0,0,0,0,0,0,0.45673551887624,0,1.1875371125186,0,0.304465478312141,0,0,0.352766121407114,1.13099932196708,0,1.3013942122792,0.884610551949874,3.88240439873782,3.09178125844551,3.39412677194655,0,0.878342391034642,0.628340120440365,0.510914110417183,0,0,0,1.49790639404823,0.457500602818626,0,0.521472960576829,0.255715457330331,1.24672826735736,1.62241263067758,0,0.746441823660558,0.252722758433675,0.631325567659422,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.562210347358373,1.55222022443409,0,0,0,0,0.278047249225598,0.696504333044333,0.823128545631774,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,1.42046841351126,0.196764231747404,1.23413690309903,2.55787339225449,1.87791380979733,1.40118410840603,3.62031669809657,4.59668899421467,9.1607754786817,10.6725990820493,9.44065495751518,8.18659154438268,0.841159794256509,0,0,0,0,0,0,0,0,0.380451252225118,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0.648414149624083,0.398282546508734,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0.627994911365499,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,4.54641980304801,1.4351793081753,0.964887042726734,0,0,0,0,0,0.335012514883631,0,0.195133647857799,0.315270288212382,0,0,0.983179888294428,0.172684981865896,0.433947175744535,0,0,0,0.551873492609465,0.642202359951168,0.586058432961016,0,2.7771801992481,0.315508219416257,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,3.06395645178409,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0,0.441056796109924,0.49465875882444,0.322928853391811,0.241251699712623,0,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.269728692769641,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,3.62768613784338,0,0,0,0.965947970160952,0,0.183151624267265,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0.962757628775446,0.758091635291392,0.25347929989024,0.377252682772152,0.842773567228942,0.832326981263301,0.689225627467359,0.476293691283074,0.695305955669133,0.578727661391115,0.824171801606613,1.03039244094078,1.37147700954166,0.177475806159338,1.66905332963125,0.145346416632329,0.846984423737976,0.423073039458382,0.548783918618318,0.263069711437843,0.407412341537585,0,0.593175090620871,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.701794825336225,0.214871054048298,1.3390183244819,3.75005412503176,4.40548887678801 | |||
|short_description=p11@Slc29a1 | |||
}} |
Revision as of 14:37, 13 September 2013
Short description: | p11@Slc29a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Slc29a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | -22bp_to_NM_022880, uc008cra.2_5end |
EntrezGene: | Slc29a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.24e-14 | 18 |
heart | 1.24e-14 | 18 |
primitive heart tube | 1.24e-14 | 18 |
primary heart field | 1.24e-14 | 18 |
anterior lateral plate mesoderm | 1.24e-14 | 18 |
heart tube | 1.24e-14 | 18 |
heart primordium | 1.24e-14 | 18 |
cardiac mesoderm | 1.24e-14 | 18 |
cardiogenic plate | 1.24e-14 | 18 |
heart rudiment | 1.24e-14 | 18 |
cardiovascular system | 1.29e-14 | 23 |
circulatory system | 1.29e-14 | 23 |
epithelial tube | 8.78e-13 | 47 |
splanchnic layer of lateral plate mesoderm | 3.63e-09 | 33 |
hindlimb bud | 2.12e-07 | 5 |
stylopod | 2.12e-07 | 5 |
lower limb segment | 2.12e-07 | 5 |
multi-limb segment region | 2.12e-07 | 5 |
pelvic appendage | 2.12e-07 | 5 |
limb segment | 2.12e-07 | 5 |
paired limb/fin segment | 2.12e-07 | 5 |
pelvic appendage bud | 2.12e-07 | 5 |
subdivision of organism along appendicular axis | 2.12e-07 | 5 |
leg | 2.12e-07 | 5 |
hindlimb | 2.12e-07 | 5 |
hindlimb stylopod | 2.12e-07 | 5 |
posterior region of body | 2.12e-07 | 5 |
pelvic complex | 2.12e-07 | 5 |
hindlimb/pelvic fin field | 2.12e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.