FFCP PHASE1:Mm9::chr17:45893571..45893577,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=115|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:45893571..45893577,-|id=chr17:45893571..45893577,-|ontology_enrichment_celltype=CL:0000049!5.38e-23!19;CL:0000557!6.22e-20!7;CL:0000988!3.12e-13!32;CL:0002032!3.12e-13!32;CL:0000037!3.12e-13!32;CL:0000566!3.12e-13!32;CL:0000837!3.12e-13!32;CL:0000763!4.34e-12!16;CL:0000034!1.60e-09!97;CL:0002320!7.23e-09!46;CL:0000134!7.23e-09!46;CL:0000219!2.20e-07!54;CL:0000144!3.02e-07!121;CL:0000012!3.02e-07!121|ontology_enrichment_celltype_v019_2=CL:0000049,7.03e-19,19;CL:0000557,4.06e-17,7;CL:0000988,4.79e-11,32;CL:0002032,4.79e-11,32;CL:0000037,4.79e-11,32;CL:0000837,4.79e-11,32;CL:0000034,2.82e-08,97;CL:0000763,1.19e-07,16;CL:0002320,1.55e-07,46;CL:0000134,1.55e-07,46|ontology_enrichment_disease=DOID:0060100!3.92e-08!3;DOID:4045!3.92e-08!3|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.34e-12!16;UBERON:0002204!3.86e-10!32;UBERON:0002384!7.23e-09!46;UBERON:0001474!1.09e-08!22;UBERON:0004765!1.09e-08!22;UBERON:0001434!1.09e-08!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.19e-07,16;UBERON:0002384,1.55e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,2.3440060335714,0,0,2.04913645487534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4239158320151,4.79922184794726,6.86179226194549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21327912387941,4.63226232806487,5.11494298912067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73952545986482,3.35883485576779,1.93479963326193,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:45893571..45893577,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=115 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:45893571..45893577,- | |||
|id=chr17:45893571..45893577,- | |||
|ontology_enrichment_celltype=CL:0000049!5.38e-23!19;CL:0000557!6.22e-20!7;CL:0000988!3.12e-13!32;CL:0002032!3.12e-13!32;CL:0000037!3.12e-13!32;CL:0000566!3.12e-13!32;CL:0000837!3.12e-13!32;CL:0000763!4.34e-12!16;CL:0000034!1.60e-09!97;CL:0002320!7.23e-09!46;CL:0000134!7.23e-09!46;CL:0000219!2.20e-07!54;CL:0000144!3.02e-07!121;CL:0000012!3.02e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,7.03e-19,19;CL:0000557,4.06e-17,7;CL:0000988,4.79e-11,32;CL:0002032,4.79e-11,32;CL:0000037,4.79e-11,32;CL:0000837,4.79e-11,32;CL:0000034,2.82e-08,97;CL:0000763,1.19e-07,16;CL:0002320,1.55e-07,46;CL:0000134,1.55e-07,46 | |||
|ontology_enrichment_disease=DOID:0060100!3.92e-08!3;DOID:4045!3.92e-08!3 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.34e-12!16;UBERON:0002204!3.86e-10!32;UBERON:0002384!7.23e-09!46;UBERON:0001474!1.09e-08!22;UBERON:0004765!1.09e-08!22;UBERON:0001434!1.09e-08!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.19e-07,16;UBERON:0002384,1.55e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,2.3440060335714,0,0,2.04913645487534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4239158320151,4.79922184794726,6.86179226194549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21327912387941,4.63226232806487,5.11494298912067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73952545986482,3.35883485576779,1.93479963326193,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:45893571..45893577,- | |||
}} |
Revision as of 14:38, 13 September 2013
Short description: | p@chr17:45893571..45893577, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:45893571..45893577, - |
Coexpression cluster: | MCL_coexpression_mm9:115 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 7.03e-19 | 19 |
granulocyte monocyte progenitor cell | 4.06e-17 | 7 |
hematopoietic cell | 4.79e-11 | 32 |
hematopoietic oligopotent progenitor cell | 4.79e-11 | 32 |
hematopoietic stem cell | 4.79e-11 | 32 |
hematopoietic multipotent progenitor cell | 4.79e-11 | 32 |
stem cell | 2.82e-08 | 97 |
myeloid cell | 1.19e-07 | 16 |
connective tissue cell | 1.55e-07 | 46 |
mesenchymal cell | 1.55e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.19e-07 | 16 |
connective tissue | 1.55e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.