FFCP PHASE1:Hg19::chr5:176798108..176798154,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10636|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9996|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000503044,ENST00000506944_5end|description=CAGE_peak_2_at_RGS14_5end|id=chr5:176798108..176798154,+|ontology_enrichment_celltype=CL:0000066!5.57e-20!254;CL:0000223!3.60e-09!59|ontology_enrichment_celltype_v019=CL:0000182;6.27e-11;12|ontology_enrichment_celltype_v019_2=CL:0000223,1.31e-13,58;CL:0000182,6.37e-11,12;CL:0000066,2.43e-10,253|ontology_enrichment_development_v019=UBERON:0003104;1.22e-12;31!UBERON:0001041;6.86e-09;30!UBERON:0004161;8.24e-09;11!UBERON:0003918;2.47e-08;10!UBERON:0007687;2.47e-08;10!UBERON:0009497;3.01e-07;13!CL:0000223;4.12e-07;58|ontology_enrichment_disease=DOID:305!4.26e-09!106;DOID:0050687!2.41e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!1.61e-13!107;UBERON:0004119!3.34e-12!169;UBERON:0000925!3.34e-12!169;UBERON:0006595!3.34e-12!169;UBERON:0000466!1.05e-11!126;UBERON:0000077!1.14e-10!130;UBERON:0009569!1.49e-10!113;UBERON:0004921!1.57e-10!129;UBERON:0004185!1.57e-10!129;UBERON:0001007!2.63e-10!155;UBERON:0001555!2.63e-10!155;UBERON:0007026!2.63e-10!155;UBERON:0005172!3.52e-10!55;UBERON:0005173!3.52e-10!55;UBERON:0002417!7.43e-10!61;UBERON:0000916!7.43e-10!61;UBERON:0005911!1.35e-09!82;UBERON:0003104!2.56e-09!238;UBERON:0009142!2.56e-09!238;UBERON:0002100!3.36e-09!216;UBERON:0000464!5.21e-09!104;UBERON:0006554!3.75e-08!44;UBERON:0001041!7.17e-08!98;UBERON:0001008!1.04e-07!45|ontology_enrichment_uberon_v019=UBERON:0002107;8.83e-12;19!UBERON:0006925;8.83e-12;19!UBERON:0002365;3.52e-11;31!UBERON:0002330;3.52e-11;31!UBERON:0005172;3.28e-09;52!UBERON:0005173;3.28e-09;52!UBERON:0002423;2.84e-08;25!UBERON:0004807;5.17e-07;22!UBERON:0003929;6.42e-07;7!UBERON:0002417;6.61e-07;58!UBERON:0000916;6.61e-07;58|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.53e-16,101;UBERON:0005172,8.55e-14,54;UBERON:0005173,8.55e-14,54;UBERON:0005911,7.58e-13,82;UBERON:0009569,1.63e-12,112;UBERON:0004921,3.26e-12,118;UBERON:0007499,8.12e-12,25;UBERON:0002107,8.94e-12,19;UBERON:0006925,8.94e-12,19;UBERON:0008836,8.94e-12,19;UBERON:0002417,9.22e-12,60;UBERON:0000916,9.22e-12,60;UBERON:0002365,2.57e-11,31;UBERON:0002330,2.57e-11,31;UBERON:0009856,3.18e-11,26;UBERON:0001041,5.06e-11,87;UBERON:0004119,3.20e-10,160;UBERON:0000925,3.20e-10,160;UBERON:0006595,3.20e-10,160;UBERON:0001007,3.89e-10,145;UBERON:0001555,3.89e-10,145;UBERON:0007026,3.89e-10,145;UBERON:0003929,6.53e-10,54;UBERON:0008835,8.90e-10,22;UBERON:0003894,8.90e-10,22;UBERON:0009854,3.14e-09,23;UBERON:0002100,3.77e-09,199;UBERON:0009497,2.86e-08,25;UBERON:0000015,2.86e-08,25;UBERON:0002423,2.86e-08,25;UBERON:0006235,2.86e-08,25;UBERON:0004161,2.86e-08,25;UBERON:0002530,2.26e-07,59;UBERON:0001048,5.15e-07,160|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,1.74467704820074,0,0,0,3.19454117451962,2.09340350391728,0,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0.547497700291537,1.25542639594803,0,0,0,0,0,0,1.83884244895785,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0.32592226663359,0.473447805734733,0,0.557052284425868,0,0.221533894583621,0.270803863765016,0.25618263945135,0.650296737799391,0.657751618414705,0.552700035571697,0.289803085735052,0,0.535081656179426,1.04535523804977,0.566546713487831,0,0,0,0.95569624297229,0.651083453856419,0.950452044448374,0,0,0,0.473554504088034,0.821127996921047,0,0,0,0,2.68280343881454,0.12786256184353,0.361439152384566,0,0.434539556882471,0.795285947051099,0,0.283604451492204,0.221729397462564,0.702678285545008,2.75056058545197,0.364295288292542,2.96627554227544,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0,2.09749718104953,0,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0.949265659568129,0,0,0,0.436094052142534,0,1.13967460498122,0.264818361626438,0.286836620748814,0,1.12135520028461,1.06748995729705,2.96001058100592,0,0.134710672069688,0.326923806226917,1.05950199351452,0,0.234321431833797,0,0,0,0,0,0,1.02077085627447,0,0,0,0,0,1.43723628363248,0,0.125118519871964,0.277064115484183,0,0.612975591598039,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0.323292113637624,0,0.302256294682921,0.339121184620975,1.15956511897978,0,1.14721838155602,0.731842236777572,0.132529768321485,0.116193942869518,1.14027160516907,0.756962552626885,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,5.88034845542168,15.2106041786197,6.87979051674338,4.72631925345123,0.441463099414651,5.78045661152634,0.171567810298526,0.98775256867763,1.124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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10636 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9996 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000503044,ENST00000506944_5end | |||
|description=CAGE_peak_2_at_RGS14_5end | |||
|id=chr5:176798108..176798154,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.57e-20!254;CL:0000223!3.60e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.27e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.31e-13,58;CL:0000182,6.37e-11,12;CL:0000066,2.43e-10,253 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.22e-12;31!UBERON:0001041;6.86e-09;30!UBERON:0004161;8.24e-09;11!UBERON:0003918;2.47e-08;10!UBERON:0007687;2.47e-08;10!UBERON:0009497;3.01e-07;13!CL:0000223;4.12e-07;58 | |||
|ontology_enrichment_disease=DOID:305!4.26e-09!106;DOID:0050687!2.41e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!1.61e-13!107;UBERON:0004119!3.34e-12!169;UBERON:0000925!3.34e-12!169;UBERON:0006595!3.34e-12!169;UBERON:0000466!1.05e-11!126;UBERON:0000077!1.14e-10!130;UBERON:0009569!1.49e-10!113;UBERON:0004921!1.57e-10!129;UBERON:0004185!1.57e-10!129;UBERON:0001007!2.63e-10!155;UBERON:0001555!2.63e-10!155;UBERON:0007026!2.63e-10!155;UBERON:0005172!3.52e-10!55;UBERON:0005173!3.52e-10!55;UBERON:0002417!7.43e-10!61;UBERON:0000916!7.43e-10!61;UBERON:0005911!1.35e-09!82;UBERON:0003104!2.56e-09!238;UBERON:0009142!2.56e-09!238;UBERON:0002100!3.36e-09!216;UBERON:0000464!5.21e-09!104;UBERON:0006554!3.75e-08!44;UBERON:0001041!7.17e-08!98;UBERON:0001008!1.04e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.83e-12;19!UBERON:0006925;8.83e-12;19!UBERON:0002365;3.52e-11;31!UBERON:0002330;3.52e-11;31!UBERON:0005172;3.28e-09;52!UBERON:0005173;3.28e-09;52!UBERON:0002423;2.84e-08;25!UBERON:0004807;5.17e-07;22!UBERON:0003929;6.42e-07;7!UBERON:0002417;6.61e-07;58!UBERON:0000916;6.61e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.53e-16,101;UBERON:0005172,8.55e-14,54;UBERON:0005173,8.55e-14,54;UBERON:0005911,7.58e-13,82;UBERON:0009569,1.63e-12,112;UBERON:0004921,3.26e-12,118;UBERON:0007499,8.12e-12,25;UBERON:0002107,8.94e-12,19;UBERON:0006925,8.94e-12,19;UBERON:0008836,8.94e-12,19;UBERON:0002417,9.22e-12,60;UBERON:0000916,9.22e-12,60;UBERON:0002365,2.57e-11,31;UBERON:0002330,2.57e-11,31;UBERON:0009856,3.18e-11,26;UBERON:0001041,5.06e-11,87;UBERON:0004119,3.20e-10,160;UBERON:0000925,3.20e-10,160;UBERON:0006595,3.20e-10,160;UBERON:0001007,3.89e-10,145;UBERON:0001555,3.89e-10,145;UBERON:0007026,3.89e-10,145;UBERON:0003929,6.53e-10,54;UBERON:0008835,8.90e-10,22;UBERON:0003894,8.90e-10,22;UBERON:0009854,3.14e-09,23;UBERON:0002100,3.77e-09,199;UBERON:0009497,2.86e-08,25;UBERON:0000015,2.86e-08,25;UBERON:0002423,2.86e-08,25;UBERON:0006235,2.86e-08,25;UBERON:0004161,2.86e-08,25;UBERON:0002530,2.26e-07,59;UBERON:0001048,5.15e-07,160 | |||
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| |||
|short_description=p2@RGS14 | |||
}} |
Revision as of 15:05, 13 September 2013
Short description: | p2@RGS14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RGS14_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503044, ENST00000506944_5end |
EntrezGene: | RGS14 |
HGNC: | 9996 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.31e-13 | 58 |
hepatocyte | 6.37e-11 | 12 |
epithelial cell | 2.43e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 6.53e-16 | 101 |
abdomen element | 8.55e-14 | 54 |
abdominal segment element | 8.55e-14 | 54 |
endo-epithelium | 7.58e-13 | 82 |
subdivision of trunk | 1.63e-12 | 112 |
subdivision of digestive tract | 3.26e-12 | 118 |
epithelial sac | 8.12e-12 | 25 |
liver | 8.94e-12 | 19 |
digestive gland | 8.94e-12 | 19 |
liver bud | 8.94e-12 | 19 |
abdominal segment of trunk | 9.22e-12 | 60 |
abdomen | 9.22e-12 | 60 |
exocrine gland | 2.57e-11 | 31 |
exocrine system | 2.57e-11 | 31 |
sac | 3.18e-11 | 26 |
foregut | 5.06e-11 | 87 |
endoderm-derived structure | 3.20e-10 | 160 |
endoderm | 3.20e-10 | 160 |
presumptive endoderm | 3.20e-10 | 160 |
digestive system | 3.89e-10 | 145 |
digestive tract | 3.89e-10 | 145 |
primitive gut | 3.89e-10 | 145 |
gut epithelium | 6.53e-10 | 54 |
hepatic diverticulum | 8.90e-10 | 22 |
liver primordium | 8.90e-10 | 22 |
digestive tract diverticulum | 3.14e-09 | 23 |
trunk | 3.77e-09 | 199 |
epithelium of foregut-midgut junction | 2.86e-08 | 25 |
anatomical boundary | 2.86e-08 | 25 |
hepatobiliary system | 2.86e-08 | 25 |
foregut-midgut junction | 2.86e-08 | 25 |
septum transversum | 2.86e-08 | 25 |
gland | 2.26e-07 | 59 |
primordium | 5.15e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.