Personal tools

FFCP PHASE1:Mm9::chr17:67703606..67703622,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=19274|HGNC=|MCL_coexpression_id=577|UniProt=E9Q9S6|association_with_transcript=174bp_to_ENSMUST00000076553_5end|description=CAGE_peak_6_at_Ptprm_5end|id=chr17:67703606..67703622,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.22e-08!23;UBERON:0001009!1.22e-08!23;UBERON:0002048!1.91e-08!14;UBERON:0000117!1.91e-08!14;UBERON:0000171!1.91e-08!14;UBERON:0000170!1.91e-08!14;UBERON:0005597!1.91e-08!14;UBERON:0000118!1.91e-08!14|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.31e-16,14;UBERON:0000117,6.31e-16,14;UBERON:0000171,6.31e-16,14;UBERON:0000170,6.31e-16,14;UBERON:0005597,6.31e-16,14;UBERON:0000118,6.31e-16,14;UBERON:0005157,3.36e-14,20;UBERON:0005153,1.57e-12,17;UBERON:0005178,1.57e-12,17;UBERON:0005181,1.57e-12,17;UBERON:0002224,1.57e-12,17;UBERON:0000915,1.57e-12,17;UBERON:0008947,1.57e-12,17;UBERON:0003258,1.57e-12,17;UBERON:0004535,6.95e-09,23;UBERON:0001009,6.95e-09,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,1.51076181570693,1.21652317463417,0.917733760808408,0,0,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0,0,0.514518872071894,1.14613375975503,0.515672092277442,0,0,0.633831403506179,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0.220868540951614,0,0.191690942036473,0,1.10115880999389,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.681535739998656,0.529000920747499,4.92769630792852,1.72084775396277,0,0,0,0,0.702222100658759,1.02258193546835,0.519572009205738,1.06001872353102,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0,0,0.34255163915718,1.03575153458869,0.593768556259299,0.173485326766136,0,0.230615497256059,0.301445281105245,0.352766121407114,0.251333182659351,0,1.15679485535929,0,0.970601099684455,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.599162557619291,0.457500602818626,0.753926112677186,0.695297280769106,0,0.20778804455956,0.162241263067758,0.81471491080253,0.870848794270651,0.252722758433675,0.420883711772948,0.130120442962704,0.459804208866946,0.180062129805349,0,0.272145996605311,0.512454881139399,0.468508622798644,0.517406741478031,0,0.189106080167819,0.351902248327898,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,0,0,0,0,0.621377317606506,0.703578179943289,0.36012412292203,0.473489471170421,0.196764231747404,1.23413690309903,0.697601834251224,1.07309360559848,1.05088808130453,0.987359099480883,3.2833492815819,2.75633952455909,3.80119967305864,2.85415149878366,1.20785776884335,0.420579897128254,0.205809224758569,0,0,0.213288250535234,1.16118335930219,0.644337306610467,0.201683524623343,1.11189021922435,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.795825888164603,0.779856348476481,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.407302655690628,0.969762435838129,0.701358198903186,0.822074982615345,0.295220295959204,0.784993639206874,0.493588655687202,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0.549122826376163,1.43768206527355,0,0.312037673114561,0.505157755894224,0.538192240565737,0,3.14080423283228,0.37898282354097,1.14075483509418,0.509235257325564,2.58159273117352,1.17254380209271,2.14239276797412,1.56106918286239,2.52216230569906,3.76489972402917,3.02964060449226,2.78567635016755,2.76295970985433,2.74833211304872,0,0,0,0.275936746304732,0.481651769963376,0.234423373184406,0.327869890753351,0,1.89304931649754,0,1.93881057959519,1.67278158566786,0.891194696329576,1.69845918473299,0,0,1.58115111178609,1.92792789853084,0.709700426041343,0.178065603667255,0.651547837414304,0.824850614862677,2.65490276679926,0,0.906970670894253,0.943025398779491,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0,0.709360934569094,0.178368817602071,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.8244312647074,0.645857706783622,0.361877549568935,0.358117032009409,0.164140899745061,0.874442509889552,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,0.954670618015114,0.316335993581135,0.406638934253697,0.216010681643603,0.627264888043406,0.655087691238533,0.269728692769641,0.661227645802687,0.785267825952089,0.259229946583586,0.621339313086926,0,0.299033092087958,0.330916980914195,0.583353565032143,0.258319646955462,0.506868376472335,0.469428954583016,0.2604087696879,0.314578033277133,0.241584120826006,0.864090018773596,0,0,0.102710957164827,0.25984164595559,0.537080087002444,0.198681354781265,0,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,1.81384306892169,0,0.0897138566094757,0,0.579568782096571,0.375364950902364,0.915758121336325,0,0.501572104035363,0,0,1.71868654031819,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,1.55328093525546,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0,1.11123363900808,0.824140228955577,2.56735367673452,0.252697211763798,1.52087579934144,1.32038438970253,1.12369808963859,0.320125762024346,0.746661096422973,2.38146845641537,0.695305955669133,0.38581844092741,0.412085900803307,1.17759136107518,0.342869252385415,0.70990322463735,0.715308569841963,1.16277133305863,0.564656282491984,0.761531471025089,2.0122077016005,0.263069711437843,0.679020569229309,1.12228454331548,0.593175090620871,0.591026894253381,1.22769312950907,0.77468420592983,0.578719832943424,0.749431733813838,0.701794825336225,1.28922632428979,1.14772999241306,0.882365676478062,0.695603506861264|short_description=p6@Ptprm}}
|EntrezGene=19274
|HGNC=
|MCL_coexpression_id=577
|UniProt=E9Q9S6
|association_with_transcript=174bp_to_ENSMUST00000076553_5end
|description=CAGE_peak_6_at_Ptprm_5end
|id=chr17:67703606..67703622,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!1.22e-08!23;UBERON:0001009!1.22e-08!23;UBERON:0002048!1.91e-08!14;UBERON:0000117!1.91e-08!14;UBERON:0000171!1.91e-08!14;UBERON:0000170!1.91e-08!14;UBERON:0005597!1.91e-08!14;UBERON:0000118!1.91e-08!14
|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.31e-16,14;UBERON:0000117,6.31e-16,14;UBERON:0000171,6.31e-16,14;UBERON:0000170,6.31e-16,14;UBERON:0005597,6.31e-16,14;UBERON:0000118,6.31e-16,14;UBERON:0005157,3.36e-14,20;UBERON:0005153,1.57e-12,17;UBERON:0005178,1.57e-12,17;UBERON:0005181,1.57e-12,17;UBERON:0002224,1.57e-12,17;UBERON:0000915,1.57e-12,17;UBERON:0008947,1.57e-12,17;UBERON:0003258,1.57e-12,17;UBERON:0004535,6.95e-09,23;UBERON:0001009,6.95e-09,23
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,1.51076181570693,1.21652317463417,0.917733760808408,0,0,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0,0,0.514518872071894,1.14613375975503,0.515672092277442,0,0,0.633831403506179,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0.220868540951614,0,0.191690942036473,0,1.10115880999389,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.681535739998656,0.529000920747499,4.92769630792852,1.72084775396277,0,0,0,0,0.702222100658759,1.02258193546835,0.519572009205738,1.06001872353102,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0,0,0.34255163915718,1.03575153458869,0.593768556259299,0.173485326766136,0,0.230615497256059,0.301445281105245,0.352766121407114,0.251333182659351,0,1.15679485535929,0,0.970601099684455,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.599162557619291,0.457500602818626,0.753926112677186,0.695297280769106,0,0.20778804455956,0.162241263067758,0.81471491080253,0.870848794270651,0.252722758433675,0.420883711772948,0.130120442962704,0.459804208866946,0.180062129805349,0,0.272145996605311,0.512454881139399,0.468508622798644,0.517406741478031,0,0.189106080167819,0.351902248327898,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,0,0,0,0,0.621377317606506,0.703578179943289,0.36012412292203,0.473489471170421,0.196764231747404,1.23413690309903,0.697601834251224,1.07309360559848,1.05088808130453,0.987359099480883,3.2833492815819,2.75633952455909,3.80119967305864,2.85415149878366,1.20785776884335,0.420579897128254,0.205809224758569,0,0,0.213288250535234,1.16118335930219,0.644337306610467,0.201683524623343,1.11189021922435,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.795825888164603,0.779856348476481,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.407302655690628,0.969762435838129,0.701358198903186,0.822074982615345,0.295220295959204,0.784993639206874,0.493588655687202,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0.549122826376163,1.43768206527355,0,0.312037673114561,0.505157755894224,0.538192240565737,0,3.14080423283228,0.37898282354097,1.14075483509418,0.509235257325564,2.58159273117352,1.17254380209271,2.14239276797412,1.56106918286239,2.52216230569906,3.76489972402917,3.02964060449226,2.78567635016755,2.76295970985433,2.74833211304872,0,0,0,0.275936746304732,0.481651769963376,0.234423373184406,0.327869890753351,0,1.89304931649754,0,1.93881057959519,1.67278158566786,0.891194696329576,1.69845918473299,0,0,1.58115111178609,1.92792789853084,0.709700426041343,0.178065603667255,0.651547837414304,0.824850614862677,2.65490276679926,0,0.906970670894253,0.943025398779491,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0,0.709360934569094,0.178368817602071,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.8244312647074,0.645857706783622,0.361877549568935,0.358117032009409,0.164140899745061,0.874442509889552,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,0.954670618015114,0.316335993581135,0.406638934253697,0.216010681643603,0.627264888043406,0.655087691238533,0.269728692769641,0.661227645802687,0.785267825952089,0.259229946583586,0.621339313086926,0,0.299033092087958,0.330916980914195,0.583353565032143,0.258319646955462,0.506868376472335,0.469428954583016,0.2604087696879,0.314578033277133,0.241584120826006,0.864090018773596,0,0,0.102710957164827,0.25984164595559,0.537080087002444,0.198681354781265,0,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,1.81384306892169,0,0.0897138566094757,0,0.579568782096571,0.375364950902364,0.915758121336325,0,0.501572104035363,0,0,1.71868654031819,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,1.55328093525546,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0,1.11123363900808,0.824140228955577,2.56735367673452,0.252697211763798,1.52087579934144,1.32038438970253,1.12369808963859,0.320125762024346,0.746661096422973,2.38146845641537,0.695305955669133,0.38581844092741,0.412085900803307,1.17759136107518,0.342869252385415,0.70990322463735,0.715308569841963,1.16277133305863,0.564656282491984,0.761531471025089,2.0122077016005,0.263069711437843,0.679020569229309,1.12228454331548,0.593175090620871,0.591026894253381,1.22769312950907,0.77468420592983,0.578719832943424,0.749431733813838,0.701794825336225,1.28922632428979,1.14772999241306,0.882365676478062,0.695603506861264
|short_description=p6@Ptprm
}}

Revision as of 15:10, 13 September 2013

Short description:p6@Ptprm
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Ptprm_5end
Coexpression cluster:MCL_coexpression_mm9:577
Association with transcript: 174bp_to_ENSMUST00000076553_5end
EntrezGene:Ptprm
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Ptprm

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G12.76
heart, neonate N20.CNhs11127.821-26I63.80
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung6.31e-1614
respiratory tube6.31e-1614
respiration organ6.31e-1614
pair of lungs6.31e-1614
lung primordium6.31e-1614
lung bud6.31e-1614
epithelial fold3.36e-1420
epithelial bud1.57e-1217
thoracic cavity element1.57e-1217
thoracic segment organ1.57e-1217
thoracic cavity1.57e-1217
thoracic segment of trunk1.57e-1217
respiratory primordium1.57e-1217
endoderm of foregut1.57e-1217
cardiovascular system6.95e-0923
circulatory system6.95e-0923







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:67703606..67703622,-&oldid=2947001"