FFCP PHASE1:Mm9::chr18:43425442..43425450,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=114|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:43425442..43425450,+|id=chr18:43425442..43425450,+|ontology_enrichment_celltype=CL:0000107!2.85e-14!9|ontology_enrichment_celltype_v019_2=CL:0000107,4.97e-77,9;CL:0000540,3.59e-21,33;CL:0000047,3.59e-21,33;CL:0000031,3.59e-21,33;CL:0000404,3.59e-21,33;CL:0000393,6.32e-18,39;CL:0000211,6.32e-18,39;CL:0002319,2.91e-16,43;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0002321,5.63e-10,70;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!2.85e-14!9;UBERON:0000010!3.43e-11!11;UBERON:0002346!1.24e-09!71;UBERON:0003075!1.24e-09!71;UBERON:0007284!1.24e-09!71;UBERON:0004121!1.66e-09!102;UBERON:0000924!1.66e-09!102;UBERON:0006601!1.66e-09!102;UBERON:0002342!1.58e-08!10;UBERON:0005062!1.58e-08!10;UBERON:0001017!2.86e-08!73;UBERON:0005743!2.86e-08!73;UBERON:0000073!7.64e-08!75;UBERON:0001016!7.64e-08!75|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.97e-77,9;UBERON:0000010,4.29e-63,11;UBERON:0000011,2.18e-33,3;UBERON:0000013,4.64e-33,3;UBERON:0010313,1.04e-15,3;UBERON:0002342,1.04e-15,3;UBERON:0002005,1.04e-15,3;UBERON:0005428,1.04e-15,3;UBERON:0005062,1.04e-15,3;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0.230615497256059,0.452167921657868,0.587943535678524,0.376999773989026,0.988779870937496,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.610953983535943,0.387904974335251,0.140271639780637,0.758838445491087,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,2.52406575533005,0.780877488593277,6.03185513651837,3.58453196928828,4.23317480756549,1.98153571552183,3.23848561339915,3.50707029493574,2.37172666767914,0,0,0,0,0,0,0,0,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0.428674070063185,0.177340233642274,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr18:43425442..43425450,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:43425442..43425450,+ | |||
|id=chr18:43425442..43425450,+ | |||
|ontology_enrichment_celltype=CL:0000107!2.85e-14!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.97e-77,9;CL:0000540,3.59e-21,33;CL:0000047,3.59e-21,33;CL:0000031,3.59e-21,33;CL:0000404,3.59e-21,33;CL:0000393,6.32e-18,39;CL:0000211,6.32e-18,39;CL:0002319,2.91e-16,43;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0002321,5.63e-10,70;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!2.85e-14!9;UBERON:0000010!3.43e-11!11;UBERON:0002346!1.24e-09!71;UBERON:0003075!1.24e-09!71;UBERON:0007284!1.24e-09!71;UBERON:0004121!1.66e-09!102;UBERON:0000924!1.66e-09!102;UBERON:0006601!1.66e-09!102;UBERON:0002342!1.58e-08!10;UBERON:0005062!1.58e-08!10;UBERON:0001017!2.86e-08!73;UBERON:0005743!2.86e-08!73;UBERON:0000073!7.64e-08!75;UBERON:0001016!7.64e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.97e-77,9;UBERON:0000010,4.29e-63,11;UBERON:0000011,2.18e-33,3;UBERON:0000013,4.64e-33,3;UBERON:0010313,1.04e-15,3;UBERON:0002342,1.04e-15,3;UBERON:0002005,1.04e-15,3;UBERON:0005428,1.04e-15,3;UBERON:0005062,1.04e-15,3;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0.230615497256059,0.452167921657868,0.587943535678524,0.376999773989026,0.988779870937496,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.610953983535943,0.387904974335251,0.140271639780637,0.758838445491087,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,2.52406575533005,0.780877488593277,6.03185513651837,3.58453196928828,4.23317480756549,1.98153571552183,3.23848561339915,3.50707029493574,2.37172666767914,0,0,0,0,0,0,0,0,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0.428674070063185,0.177340233642274,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr18:43425442..43425450,+ | |||
}} |
Revision as of 16:12, 13 September 2013
Short description: | p@chr18:43425442..43425450, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:43425442..43425450, + |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.97e-77 | 9 |
neuron | 3.59e-21 | 33 |
neuronal stem cell | 3.59e-21 | 33 |
neuroblast | 3.59e-21 | 33 |
electrically signaling cell | 3.59e-21 | 33 |
electrically responsive cell | 6.32e-18 | 39 |
electrically active cell | 6.32e-18 | 39 |
neural cell | 2.91e-16 | 43 |
ectodermal cell | 6.80e-16 | 44 |
neurectodermal cell | 6.80e-16 | 44 |
embryonic cell | 5.63e-10 | 70 |
somatic stem cell | 1.22e-07 | 91 |
multi fate stem cell | 1.22e-07 | 91 |
stem cell | 3.71e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 4.97e-77 | 9 |
peripheral nervous system | 4.29e-63 | 11 |
parasympathetic nervous system | 2.18e-33 | 3 |
sympathetic nervous system | 4.64e-33 | 3 |
neural crest-derived structure | 1.04e-15 | 3 |
neural crest | 1.04e-15 | 3 |
enteric nervous system | 1.04e-15 | 3 |
vagal neural crest | 1.04e-15 | 3 |
neural fold | 1.04e-15 | 3 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.