FFCP PHASE1:Hg19::chr5:76114932..76114943,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2150|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3538|TSSclassifier=S|UniProt=P55085,Q53XJ8|association_with_transcript=99bp_to_NM_005242,uc003keo.2_5end|coexpression_cluster_id=C4521|description=CAGE_peak_4_at_F2RL1_5end|id=chr5:76114932..76114943,+|ontology_enrichment_celltype=CL:0000066!1.24e-20!254;CL:0002076!7.39e-17!43;CL:0002321!9.72e-17!248;CL:0000223!9.84e-17!59;CL:0000220!6.97e-16!246;CL:0002251!2.82e-08!21;CL:0002368!1.61e-07!13;CL:0000359!3.73e-07!32|ontology_enrichment_celltype_v019=CL:0002076;3.88e-12;42!CL:0002251;1.75e-07;20!CL:0002322;3.05e-07;5|ontology_enrichment_celltype_v019_2=CL:0000066,1.80e-15,253;CL:0002076,4.26e-14,42;CL:0000223,4.90e-12,58;CL:0002322,1.19e-07,5;CL:0002251,1.89e-07,20;CL:0002321,6.08e-07,250|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:193!2.61e-12!29;DOID:120!6.66e-11!27;DOID:305!1.55e-09!106;DOID:2394!1.91e-09!14;DOID:1749!9.78e-09!14|ontology_enrichment_disease_v019=DOID:193;6.61e-16;29!DOID:120;1.58e-13;27!DOID:2394;8.77e-13;14!DOID:1749;1.76e-08;14!DOID:299;8.92e-07;25|ontology_enrichment_disease_v019_2=DOID:193,7.68e-16,29;DOID:120,1.69e-13,27;DOID:2394,8.66e-13,14;DOID:305,7.36e-10,106;DOID:1749,1.01e-08,14|ontology_enrichment_uberon=UBERON:0003914!8.01e-14!118;UBERON:0004119!1.30e-12!169;UBERON:0000925!1.30e-12!169;UBERON:0006595!1.30e-12!169;UBERON:0001007!9.31e-11!155;UBERON:0001555!9.31e-11!155;UBERON:0007026!9.31e-11!155;UBERON:0000466!3.86e-10!126;UBERON:0001048!5.67e-10!168;UBERON:0000481!7.48e-10!347;UBERON:0000922!1.40e-09!612;UBERON:0005911!2.69e-09!82;UBERON:0000490!3.02e-09!138;UBERON:0004111!4.32e-09!241;UBERON:0005156!7.56e-09!59;UBERON:0000990!7.56e-09!59;UBERON:0001637!9.67e-09!42;UBERON:0003509!9.67e-09!42;UBERON:0004572!9.67e-09!42;UBERON:0000464!9.98e-09!104;UBERON:0004176!1.31e-08!22;UBERON:0004921!1.73e-08!129;UBERON:0004185!1.73e-08!129;UBERON:0003104!2.54e-08!238;UBERON:0009142!2.54e-08!238;UBERON:0000923!2.69e-08!604;UBERON:0005291!2.69e-08!604;UBERON:0006598!2.69e-08!604;UBERON:0002532!2.69e-08!604;UBERON:0002050!3.49e-08!605;UBERON:0005423!3.49e-08!605;UBERON:0000991!4.19e-08!21;UBERON:0009196!4.19e-08!21;UBERON:0009117!4.19e-08!21;UBERON:0005564!4.19e-08!21;UBERON:0002049!4.34e-08!79;UBERON:0007798!4.34e-08!79;UBERON:0000468!5.89e-08!659;UBERON:0000467!7.93e-08!625;UBERON:0000477!8.37e-08!286;UBERON:0000480!1.02e-07!626;UBERON:0004872!1.81e-07!84;UBERON:0003133!3.10e-07!48;UBERON:0004535!4.39e-07!110;UBERON:0002100!4.93e-07!216;UBERON:0000992!5.08e-07!13;UBERON:0001009!8.18e-07!113|ontology_enrichment_uberon_v019=UBERON:0000991;1.29e-11;21!UBERON:0000992;8.48e-10;13!UBERON:0003133;4.04e-08;44!UBERON:0000344;7.35e-08;20!UBERON:0003350;1.34e-07;8!UBERON:0003134;6.22e-07;33!UBERON:0003100;7.48e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0004176,1.54e-12,22;UBERON:0000991,1.19e-11,21;UBERON:0009196,1.19e-11,21;UBERON:0009117,1.19e-11,21;UBERON:0005564,1.19e-11,21;UBERON:0000992,8.01e-10,13;UBERON:0002323,3.59e-09,46;UBERON:0005156,9.88e-09,59;UBERON:0000990,9.88e-09,59;UBERON:0003133,1.20e-08,48;UBERON:0004458,2.84e-08,49;UBERON:0003100,4.56e-08,41;UBERON:0000344,9.11e-08,20;UBERON:0003350,1.48e-07,8;UBERON:0003886,5.11e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0,0,0,0.123766352960047,0,0,1.20538905604795,0.730310090387373,0.975865597581014,0.246242116153576,0,0,0,0.273748850145768,0.502170558379211,0,0,0,0,0,0.154816123316076,0.919421224478927,1.8072355126695,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.383587685530591,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0.860234595106124,1.38856200643038,0,1.25849830862972,0.275118041940067,0.417989933073621,0,0.71153252537342,0.66944122552934,0.805658634218294,2.28081631715554,0.24406205754817,1.10298924103761,3.24056779152704,0.267899184852239,0,0,0,0,0.732806975721629,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,2.1349799145941,2.71334303258876,1.24484414159907,0.67355336034844,0.817309515567294,1.21085942115945,8.64263886719998,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,1.36118619792025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,7.34391242020528,5.18217629122586,3.44165514466805,1.82960559194393,3.44577397635862,1.74290914304278,1.96956004529204,2.27088765788066,1.09493207722749,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,3.19769940212095,0.343135620597051,4.7192622725709,0,1.70899253099772,1.11106134190236,0.325808305310325,0,0,0,0.234817388471643,0.721832238805369,0.462985512576611,0,0,0,0,0,0,5.62403003920662,2.519731922982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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2150 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3538 | |||
|TSSclassifier=S | |||
|UniProt=P55085,Q53XJ8 | |||
|association_with_transcript=99bp_to_NM_005242,uc003keo.2_5end | |||
|coexpression_cluster_id=C4521 | |||
|description=CAGE_peak_4_at_F2RL1_5end | |||
|id=chr5:76114932..76114943,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.24e-20!254;CL:0002076!7.39e-17!43;CL:0002321!9.72e-17!248;CL:0000223!9.84e-17!59;CL:0000220!6.97e-16!246;CL:0002251!2.82e-08!21;CL:0002368!1.61e-07!13;CL:0000359!3.73e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.88e-12;42!CL:0002251;1.75e-07;20!CL:0002322;3.05e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.80e-15,253;CL:0002076,4.26e-14,42;CL:0000223,4.90e-12,58;CL:0002322,1.19e-07,5;CL:0002251,1.89e-07,20;CL:0002321,6.08e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!2.61e-12!29;DOID:120!6.66e-11!27;DOID:305!1.55e-09!106;DOID:2394!1.91e-09!14;DOID:1749!9.78e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:193;6.61e-16;29!DOID:120;1.58e-13;27!DOID:2394;8.77e-13;14!DOID:1749;1.76e-08;14!DOID:299;8.92e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:193,7.68e-16,29;DOID:120,1.69e-13,27;DOID:2394,8.66e-13,14;DOID:305,7.36e-10,106;DOID:1749,1.01e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!8.01e-14!118;UBERON:0004119!1.30e-12!169;UBERON:0000925!1.30e-12!169;UBERON:0006595!1.30e-12!169;UBERON:0001007!9.31e-11!155;UBERON:0001555!9.31e-11!155;UBERON:0007026!9.31e-11!155;UBERON:0000466!3.86e-10!126;UBERON:0001048!5.67e-10!168;UBERON:0000481!7.48e-10!347;UBERON:0000922!1.40e-09!612;UBERON:0005911!2.69e-09!82;UBERON:0000490!3.02e-09!138;UBERON:0004111!4.32e-09!241;UBERON:0005156!7.56e-09!59;UBERON:0000990!7.56e-09!59;UBERON:0001637!9.67e-09!42;UBERON:0003509!9.67e-09!42;UBERON:0004572!9.67e-09!42;UBERON:0000464!9.98e-09!104;UBERON:0004176!1.31e-08!22;UBERON:0004921!1.73e-08!129;UBERON:0004185!1.73e-08!129;UBERON:0003104!2.54e-08!238;UBERON:0009142!2.54e-08!238;UBERON:0000923!2.69e-08!604;UBERON:0005291!2.69e-08!604;UBERON:0006598!2.69e-08!604;UBERON:0002532!2.69e-08!604;UBERON:0002050!3.49e-08!605;UBERON:0005423!3.49e-08!605;UBERON:0000991!4.19e-08!21;UBERON:0009196!4.19e-08!21;UBERON:0009117!4.19e-08!21;UBERON:0005564!4.19e-08!21;UBERON:0002049!4.34e-08!79;UBERON:0007798!4.34e-08!79;UBERON:0000468!5.89e-08!659;UBERON:0000467!7.93e-08!625;UBERON:0000477!8.37e-08!286;UBERON:0000480!1.02e-07!626;UBERON:0004872!1.81e-07!84;UBERON:0003133!3.10e-07!48;UBERON:0004535!4.39e-07!110;UBERON:0002100!4.93e-07!216;UBERON:0000992!5.08e-07!13;UBERON:0001009!8.18e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000991;1.29e-11;21!UBERON:0000992;8.48e-10;13!UBERON:0003133;4.04e-08;44!UBERON:0000344;7.35e-08;20!UBERON:0003350;1.34e-07;8!UBERON:0003134;6.22e-07;33!UBERON:0003100;7.48e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,1.54e-12,22;UBERON:0000991,1.19e-11,21;UBERON:0009196,1.19e-11,21;UBERON:0009117,1.19e-11,21;UBERON:0005564,1.19e-11,21;UBERON:0000992,8.01e-10,13;UBERON:0002323,3.59e-09,46;UBERON:0005156,9.88e-09,59;UBERON:0000990,9.88e-09,59;UBERON:0003133,1.20e-08,48;UBERON:0004458,2.84e-08,49;UBERON:0003100,4.56e-08,41;UBERON:0000344,9.11e-08,20;UBERON:0003350,1.48e-07,8;UBERON:0003886,5.11e-07,54 | |||
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| |||
|short_description=p4@F2RL1 | |||
}} |
Revision as of 16:29, 13 September 2013
Short description: | p4@F2RL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_F2RL1_5end |
Coexpression cluster: | C4521_bile_mesenchymal_meningioma_alveolar_Wilms_Small_prostate |
Association with transcript: | 99bp_to_NM_005242, uc003keo.2_5end |
EntrezGene: | F2RL1 |
HGNC: | 3538 |
UniProt: | P55085Q53XJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.80e-15 | 253 |
endo-epithelial cell | 4.26e-14 | 42 |
endodermal cell | 4.90e-12 | 58 |
embryonic stem cell | 1.19e-07 | 5 |
epithelial cell of alimentary canal | 1.89e-07 | 20 |
embryonic cell | 6.08e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
external genitalia | 1.54e-12 | 22 |
gonad | 1.19e-11 | 21 |
indifferent external genitalia | 1.19e-11 | 21 |
indifferent gonad | 1.19e-11 | 21 |
gonad primordium | 1.19e-11 | 21 |
female gonad | 8.01e-10 | 13 |
body cavity | 3.59e-09 | 46 |
reproductive structure | 9.88e-09 | 59 |
reproductive system | 9.88e-09 | 59 |
reproductive organ | 1.20e-08 | 48 |
body cavity or lining | 2.84e-08 | 49 |
female organism | 4.56e-08 | 41 |
mucosa | 9.11e-08 | 20 |
epithelium of mucosa | 1.48e-07 | 8 |
body cavity precursor | 5.11e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 7.68e-16 | 29 |
female reproductive organ cancer | 1.69e-13 | 27 |
ovarian cancer | 8.66e-13 | 14 |
carcinoma | 7.36e-10 | 106 |
squamous cell carcinoma | 1.01e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.