FFCP PHASE1:Hg19::chr6:10529983..10530000,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2651|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4204|TSSclassifier=S|UniProt=|association_with_transcript=-29bp_to_ENST00000485764_5end|coexpression_cluster_id=C80|description=CAGE_peak_13_at_GCNT2_5end|id=chr6:10529983..10530000,+|ontology_enrichment_celltype=CL:0002009!1.33e-09!65;CL:0000557!1.47e-09!71;CL:0002057!1.90e-09!42;CL:0000860!2.82e-09!45;CL:0000453!1.02e-08!5;CL:0002194!4.02e-08!63;CL:0000576!4.02e-08!63;CL:0000040!4.02e-08!63;CL:0000559!4.02e-08!63;CL:0000839!6.59e-08!70;CL:0000766!9.98e-07!76|ontology_enrichment_celltype_v019=CL:0002567;7.29e-23;3!CL:0000148;1.61e-18;10!CL:0001014;1.09e-16;2!CL:0001016;1.09e-16;2!CL:0000453;1.13e-14;5!CL:0000147;3.43e-13;14!CL:0000075;1.15e-12;27!CL:0000710;3.53e-09;20!CL:0002566;1.17e-08;1!CL:0000990;2.29e-08;8!CL:0000451;6.39e-07;10|ontology_enrichment_celltype_v019_2=CL:0002567,2.86e-23,3;CL:0000148,8.95e-19,10;CL:0000541,8.95e-19,10;CL:0001014,1.09e-16,2;CL:0001016,1.09e-16,2;CL:0000453,1.13e-14,5;CL:0000147,2.27e-13,14;CL:0000075,8.79e-13,27;CL:0000710,2.66e-09,20;CL:0002566,9.02e-09,1;CL:0000990,2.29e-08,8;CL:0000451,6.39e-07,10|ontology_enrichment_development_v019=UBERON:0003918;2.81e-07;10!UBERON:0007687;2.81e-07;10|ontology_enrichment_disease=DOID:305!1.12e-11!106;DOID:0050687!4.58e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!1.19e-12!9;UBERON:0008947!1.09e-09!38;UBERON:0003258!1.09e-09!38;UBERON:0002371!1.37e-07!80;UBERON:0001474!4.10e-07!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0.164201178899891,0,0,0,0,0,0,0,0.0774672005803016,1.42169232487422,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0.257575567634187,0.290796477559129,0.377875943688809,0.485168122375632,0.232429036905685,0,0,0,0.256160706529101,0,1.03423704220986,0.645484683583826,0,0,0,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0.290209238628584,0,1.24564449799115,0.251248665256743,0,0.217188844705117,0,0,1.26584954976354,0,0,0,0.22465726229299,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0.674338760312407,0.723033089650446,0.441175890929576,0.653638332277218,0.474541238222193,0.404493924480493,1.37355025587742,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,1.52394946301206,1.90994212779139,2.34434894420094,1.71072446022705,0.719792448923265,0,4.85904935471983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422206515571503,0,0,0,0,0,0.501689773854853,1.52925763827023,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.854592569019785,0,1.22520107990516,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0.852408440419239,0,0,0,0,0.140669416410513,0.111308705022906,0,0,2.78947183551498,0,0.251932747854276,0,0.369254416383208,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,0,0.437299999980979,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.421996129056054,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,2.67058417487502,0,0,0,0.063186579628488,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0.859930162358083,0.0967563312890851,0,0,0,0,0.225980740780532,0,0.19871461170299,0.0633107959558787,0,1.36269994427607,0,0,0,0,0,0,1.36677789121976,0,0.135904206073614,0,0.407992870545287,0,0,0,0,0,0,0,0.458320848023367,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0.0824158583811665,0,0.688992370603241,0,0,0,0,0,0,25.6470236368711,7.7380195455795,0,0,1.89133697518076,0.157363764404994,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,1.19730191562487,0,0,0,0.293104467356165,0,0,0,0.513260513652988,0.704815022316672,0.427149650270779,0.628817220398664,0.828478110694391,0,0,2.67943716437971,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0.573409195690071,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2651 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000485764_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_13_at_GCNT2_5end | |||
|id=chr6:10529983..10530000,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.33e-09!65;CL:0000557!1.47e-09!71;CL:0002057!1.90e-09!42;CL:0000860!2.82e-09!45;CL:0000453!1.02e-08!5;CL:0002194!4.02e-08!63;CL:0000576!4.02e-08!63;CL:0000040!4.02e-08!63;CL:0000559!4.02e-08!63;CL:0000839!6.59e-08!70;CL:0000766!9.98e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0002567;7.29e-23;3!CL:0000148;1.61e-18;10!CL:0001014;1.09e-16;2!CL:0001016;1.09e-16;2!CL:0000453;1.13e-14;5!CL:0000147;3.43e-13;14!CL:0000075;1.15e-12;27!CL:0000710;3.53e-09;20!CL:0002566;1.17e-08;1!CL:0000990;2.29e-08;8!CL:0000451;6.39e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.86e-23,3;CL:0000148,8.95e-19,10;CL:0000541,8.95e-19,10;CL:0001014,1.09e-16,2;CL:0001016,1.09e-16,2;CL:0000453,1.13e-14,5;CL:0000147,2.27e-13,14;CL:0000075,8.79e-13,27;CL:0000710,2.66e-09,20;CL:0002566,9.02e-09,1;CL:0000990,2.29e-08,8;CL:0000451,6.39e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.81e-07;10!UBERON:0007687;2.81e-07;10 | |||
|ontology_enrichment_disease=DOID:305!1.12e-11!106;DOID:0050687!4.58e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.19e-12!9;UBERON:0008947!1.09e-09!38;UBERON:0003258!1.09e-09!38;UBERON:0002371!1.37e-07!80;UBERON:0001474!4.10e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0.164201178899891,0,0,0,0,0,0,0,0.0774672005803016,1.42169232487422,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0.257575567634187,0.290796477559129,0.377875943688809,0.485168122375632,0.232429036905685,0,0,0,0.256160706529101,0,1.03423704220986,0.645484683583826,0,0,0,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0.290209238628584,0,1.24564449799115,0.251248665256743,0,0.217188844705117,0,0,1.26584954976354,0,0,0,0.22465726229299,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0.674338760312407,0.723033089650446,0.441175890929576,0.653638332277218,0.474541238222193,0.404493924480493,1.37355025587742,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,1.52394946301206,1.90994212779139,2.34434894420094,1.71072446022705,0.719792448923265,0,4.85904935471983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422206515571503,0,0,0,0,0,0.501689773854853,1.52925763827023,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.854592569019785,0,1.22520107990516,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0.852408440419239,0,0,0,0,0.140669416410513,0.111308705022906,0,0,2.78947183551498,0,0.251932747854276,0,0.369254416383208,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,0,0.437299999980979,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.421996129056054,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,2.67058417487502,0,0,0,0.063186579628488,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0.859930162358083,0.0967563312890851,0,0,0,0,0.225980740780532,0,0.19871461170299,0.0633107959558787,0,1.36269994427607,0,0,0,0,0,0,1.36677789121976,0,0.135904206073614,0,0.407992870545287,0,0,0,0,0,0,0,0.458320848023367,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0.0824158583811665,0,0.688992370603241,0,0,0,0,0,0,25.6470236368711,7.7380195455795,0,0,1.89133697518076,0.157363764404994,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,1.19730191562487,0,0,0,0.293104467356165,0,0,0,0.513260513652988,0.704815022316672,0.427149650270779,0.628817220398664,0.828478110694391,0,0,2.67943716437971,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0.573409195690071,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26122833866349,0.797189041880179,0.817826971279221,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0,1.0085253435176,0,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,0.271878931907327,0.0657727735628491,1.30013224972365,0.333694205676207,0.863424021355654,0,0,0,1.72742072974897,8.12177869407985,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.231522474323834,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0.606351566874658,0,0,0.26940821205835,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p13@GCNT2 | |||
}} |
Revision as of 17:10, 13 September 2013
Short description: | p13@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_GCNT2_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -29bp_to_ENST00000485764_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.86e-23 | 3 |
melanocyte | 8.95e-19 | 10 |
melanoblast | 8.95e-19 | 10 |
CD1a-positive Langerhans cell | 1.09e-16 | 2 |
immature CD1a-positive Langerhans cell | 1.09e-16 | 2 |
Langerhans cell | 1.13e-14 | 5 |
pigment cell | 2.27e-13 | 14 |
columnar/cuboidal epithelial cell | 8.79e-13 | 27 |
neurecto-epithelial cell | 2.66e-09 | 20 |
dark melanocyte | 9.02e-09 | 1 |
conventional dendritic cell | 2.29e-08 | 8 |
dendritic cell | 6.39e-07 | 10 |
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