FFCP PHASE1:Mm9::chr19:23210577..23210587,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=73|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:23210577..23210587,+|id=chr19:23210577..23210587,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,6.17e-22,5;CL:0000223,1.49e-19,20;CL:0000066,2.54e-15,25;CL:0002250,2.04e-12,3;CL:0002563,3.82e-11,9;CL:0002251,3.82e-11,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.82e-11,9;UBERON:0004808,3.82e-11,9;UBERON:0001277,3.82e-11,9;UBERON:0000485,4.40e-09,11;UBERON:0003929,5.72e-09,55;UBERON:0002107,7.60e-09,22;UBERON:0007499,7.60e-09,22;UBERON:0006925,7.60e-09,22;UBERON:0009497,7.60e-09,22;UBERON:0000015,7.60e-09,22;UBERON:0002423,7.60e-09,22;UBERON:0006235,7.60e-09,22;UBERON:0008835,7.60e-09,22;UBERON:0003894,7.60e-09,22;UBERON:0004161,7.60e-09,22;UBERON:0008836,7.60e-09,22;UBERON:0009854,2.01e-08,23;UBERON:0009856,2.01e-08,23;UBERON:0000490,2.04e-08,66;UBERON:0000007,2.77e-08,8;UBERON:0003296,2.77e-08,8;UBERON:0010133,2.77e-08,8;UBERON:0005911,5.24e-08,69;UBERON:0002365,1.11e-07,25;UBERON:0002330,1.11e-07,25;UBERON:0001242,1.19e-07,13;UBERON:0001262,1.19e-07,13;UBERON:0004786,1.19e-07,13;UBERON:0000949,1.72e-07,72|phase1_expression=0,0.697950815278722,0,2.72217790176147,2.00358291978539,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,1.1554064790051,1.66234645358492,1.42918549383658,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0.436050312760893,0.878744730937887,0.388859798148567,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,1.68828783009504,0,0,0,0,0.605809546665472,0.226714680320357,11.8844440367688,2.58127163094416,2.03991400112325,17.810205324048,9.09686984426737,5.82434953226536,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,1.37020655662872,0,0.148442139064825,0,0,0.230615497256059,0,0,0.251333182659351,0.494389935468748,0.144599356919912,0,0,0.441683036920787,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.438599962275997,0,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0.442830443938806,0.31399745568275,0.740382983530803,0,0,0,0,0,0,0.25462585178142,0.287696137450811,1.62135226775035,0,0,0,0,0.252578877947112,0.538192240565737,0.964887042726734,0.739012760666419,0,0,0,0,0.167506257441816,0,0,0,0,0,1.47476983244164,0.690739927463582,0.578596234326046,0,0,0,0,0,0.117211686592203,0.163934945376675,0.757412781613119,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0.632073515871632,1.05418608574999,0,3.06395645178409,0,0,0.428674070063185,0.354680467284547,1.07021290561242,2.13913726782757,1.2178597964584,0,0,0,0,0.161464426695906,0,0,0.164140899745061,0.874442509889552,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0.785267825952089,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.515559547031063,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.115884325944855,0.578727661391115,0.824171801606613,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p@chr19:23210577..23210587,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:23210577..23210587,+ | |||
|id=chr19:23210577..23210587,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.17e-22,5;CL:0000223,1.49e-19,20;CL:0000066,2.54e-15,25;CL:0002250,2.04e-12,3;CL:0002563,3.82e-11,9;CL:0002251,3.82e-11,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.82e-11,9;UBERON:0004808,3.82e-11,9;UBERON:0001277,3.82e-11,9;UBERON:0000485,4.40e-09,11;UBERON:0003929,5.72e-09,55;UBERON:0002107,7.60e-09,22;UBERON:0007499,7.60e-09,22;UBERON:0006925,7.60e-09,22;UBERON:0009497,7.60e-09,22;UBERON:0000015,7.60e-09,22;UBERON:0002423,7.60e-09,22;UBERON:0006235,7.60e-09,22;UBERON:0008835,7.60e-09,22;UBERON:0003894,7.60e-09,22;UBERON:0004161,7.60e-09,22;UBERON:0008836,7.60e-09,22;UBERON:0009854,2.01e-08,23;UBERON:0009856,2.01e-08,23;UBERON:0000490,2.04e-08,66;UBERON:0000007,2.77e-08,8;UBERON:0003296,2.77e-08,8;UBERON:0010133,2.77e-08,8;UBERON:0005911,5.24e-08,69;UBERON:0002365,1.11e-07,25;UBERON:0002330,1.11e-07,25;UBERON:0001242,1.19e-07,13;UBERON:0001262,1.19e-07,13;UBERON:0004786,1.19e-07,13;UBERON:0000949,1.72e-07,72 | |||
|phase1_expression=0,0.697950815278722,0,2.72217790176147,2.00358291978539,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,1.1554064790051,1.66234645358492,1.42918549383658,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0.436050312760893,0.878744730937887,0.388859798148567,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,1.68828783009504,0,0,0,0,0.605809546665472,0.226714680320357,11.8844440367688,2.58127163094416,2.03991400112325,17.810205324048,9.09686984426737,5.82434953226536,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,1.37020655662872,0,0.148442139064825,0,0,0.230615497256059,0,0,0.251333182659351,0.494389935468748,0.144599356919912,0,0,0.441683036920787,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.438599962275997,0,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0.442830443938806,0.31399745568275,0.740382983530803,0,0,0,0,0,0,0.25462585178142,0.287696137450811,1.62135226775035,0,0,0,0,0.252578877947112,0.538192240565737,0.964887042726734,0.739012760666419,0,0,0,0,0.167506257441816,0,0,0,0,0,1.47476983244164,0.690739927463582,0.578596234326046,0,0,0,0,0,0.117211686592203,0.163934945376675,0.757412781613119,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0.632073515871632,1.05418608574999,0,3.06395645178409,0,0,0.428674070063185,0.354680467284547,1.07021290561242,2.13913726782757,1.2178597964584,0,0,0,0,0.161464426695906,0,0,0.164140899745061,0.874442509889552,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0.785267825952089,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.515559547031063,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.115884325944855,0.578727661391115,0.824171801606613,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr19:23210577..23210587,+ | |||
}} |
Revision as of 17:13, 13 September 2013
Short description: | p@chr19:23210577..23210587, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:23210577..23210587, + |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.17e-22 | 5 |
endodermal cell | 1.49e-19 | 20 |
epithelial cell | 2.54e-15 | 25 |
intestinal crypt stem cell | 2.04e-12 | 3 |
intestinal epithelial cell | 3.82e-11 | 9 |
epithelial cell of alimentary canal | 3.82e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.82e-11 | 9 |
gastrointestinal system epithelium | 3.82e-11 | 9 |
intestinal epithelium | 3.82e-11 | 9 |
simple columnar epithelium | 4.40e-09 | 11 |
gut epithelium | 5.72e-09 | 55 |
liver | 7.60e-09 | 22 |
epithelial sac | 7.60e-09 | 22 |
digestive gland | 7.60e-09 | 22 |
epithelium of foregut-midgut junction | 7.60e-09 | 22 |
anatomical boundary | 7.60e-09 | 22 |
hepatobiliary system | 7.60e-09 | 22 |
foregut-midgut junction | 7.60e-09 | 22 |
hepatic diverticulum | 7.60e-09 | 22 |
liver primordium | 7.60e-09 | 22 |
septum transversum | 7.60e-09 | 22 |
liver bud | 7.60e-09 | 22 |
digestive tract diverticulum | 2.01e-08 | 23 |
sac | 2.01e-08 | 23 |
unilaminar epithelium | 2.04e-08 | 66 |
pituitary gland | 2.77e-08 | 8 |
gland of diencephalon | 2.77e-08 | 8 |
neuroendocrine gland | 2.77e-08 | 8 |
endo-epithelium | 5.24e-08 | 69 |
exocrine gland | 1.11e-07 | 25 |
exocrine system | 1.11e-07 | 25 |
intestinal mucosa | 1.19e-07 | 13 |
wall of intestine | 1.19e-07 | 13 |
gastrointestinal system mucosa | 1.19e-07 | 13 |
endocrine system | 1.72e-07 | 72 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.