FFCP PHASE1:Mm9::chr19:38199735..38199744,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19662|HGNC=|MCL_coexpression_id=8|UniProt=Q00724|association_with_transcript=66bp_to_ENSMUST00000025951,NM_001159487,uc008hje.2_5end|description=CAGE_peak_4_at_Rbp4_5end|id=chr19:38199735..38199744,-|ontology_enrichment_celltype=CL:0000181!2.07e-07!5;CL:0000417!2.07e-07!5;CL:0000668!2.07e-07!5;CL:0000412!2.07e-07!5;CL:0000182!2.07e-07!5|ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-18,5;CL:0000057,6.09e-07,1;CL:0000632,6.09e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.25e-31!22;UBERON:0007499!4.25e-31!22;UBERON:0006925!4.25e-31!22;UBERON:0009497!4.25e-31!22;UBERON:0000015!4.25e-31!22;UBERON:0002423!4.25e-31!22;UBERON:0006235!4.25e-31!22;UBERON:0008835!4.25e-31!22;UBERON:0003894!4.25e-31!22;UBERON:0004161!4.25e-31!22;UBERON:0008836!4.25e-31!22;UBERON:0009854!1.66e-29!23;UBERON:0009856!1.66e-29!23;UBERON:0002365!1.04e-26!25;UBERON:0002330!1.04e-26!25;UBERON:0009569!4.00e-17!66;UBERON:0005177!2.38e-16!85;UBERON:0005256!4.65e-16!47;UBERON:0005172!3.70e-15!49;UBERON:0005173!3.70e-15!49;UBERON:0002417!3.70e-15!49;UBERON:0000916!3.70e-15!49;UBERON:0000466!2.32e-14!79;UBERON:0003914!4.12e-13!47;UBERON:0002100!4.25e-13!98;UBERON:0005911!2.56e-12!69;UBERON:0000949!1.74e-11!72;UBERON:0001041!2.67e-11!92;UBERON:0002368!3.17e-11!60;UBERON:0005057!2.06e-10!51;UBERON:0000077!2.45e-10!97;UBERON:0002530!6.38e-10!65;UBERON:0003929!2.71e-09!55;UBERON:0000025!2.96e-09!114;UBERON:0004111!3.76e-08!122;UBERON:0003104!8.30e-08!131;UBERON:0009142!8.30e-08!131;UBERON:0004921!5.39e-07!126;UBERON:0004185!5.39e-07!126;UBERON:0000490!6.05e-07!66;UBERON:0001007!8.96e-07!128;UBERON:0001555!8.96e-07!128;UBERON:0007026!8.96e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.15e-48,22;UBERON:0007499,6.15e-48,22;UBERON:0006925,6.15e-48,22;UBERON:0009497,6.15e-48,22;UBERON:0000015,6.15e-48,22;UBERON:0002423,6.15e-48,22;UBERON:0006235,6.15e-48,22;UBERON:0008835,6.15e-48,22;UBERON:0003894,6.15e-48,22;UBERON:0004161,6.15e-48,22;UBERON:0008836,6.15e-48,22;UBERON:0009854,8.68e-46,23;UBERON:0009856,8.68e-46,23;UBERON:0002365,5.28e-42,25;UBERON:0002330,5.28e-42,25;UBERON:0005256,1.27e-22,45;UBERON:0003914,1.38e-21,47;UBERON:0005172,1.23e-20,49;UBERON:0005173,1.23e-20,49;UBERON:0002417,1.23e-20,49;UBERON:0000916,1.23e-20,49;UBERON:0003929,3.37e-18,55;UBERON:0002368,1.55e-16,60;UBERON:0003104,3.09e-16,61;UBERON:0009142,3.09e-16,61;UBERON:0002530,3.96e-15,65;UBERON:0000490,7.14e-15,66;UBERON:0009569,7.14e-15,66;UBERON:0005911,3.78e-14,69;UBERON:0000949,1.75e-13,72;UBERON:0005177,3.97e-12,79;UBERON:0001041,5.94e-12,80;UBERON:0002100,2.04e-10,90;UBERON:0000025,8.08e-08,114;UBERON:0004921,8.08e-08,114;UBERON:0001007,1.19e-07,116;UBERON:0001555,1.19e-07,116;UBERON:0007026,1.19e-07,116;UBERON:0004119,1.74e-07,118;UBERON:0000925,1.74e-07,118;UBERON:0006595,1.74e-07,118;UBERON:0004111,3.55e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,0,3.44169550792555,4.75979933595425,5.39703191637817,3.24888208723835,2.68816132258401,1.68533304158102,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55743152504579,0.500535317148282,0,0.449724224769707,0.202860121388503,0,0.763877555344259,0.575392274901621,1.78348749452539,1.64736847912849,2.87536413054709,3.34926852901653,5.61667811606209,3.78868316920668,2.33216637578486,3.85954817090694,0.739012760666419,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p4@Rbp4}} | ||
|EntrezGene=19662 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q00724 | |||
|association_with_transcript=66bp_to_ENSMUST00000025951,NM_001159487,uc008hje.2_5end | |||
|description=CAGE_peak_4_at_Rbp4_5end | |||
|id=chr19:38199735..38199744,- | |||
|ontology_enrichment_celltype=CL:0000181!2.07e-07!5;CL:0000417!2.07e-07!5;CL:0000668!2.07e-07!5;CL:0000412!2.07e-07!5;CL:0000182!2.07e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-18,5;CL:0000057,6.09e-07,1;CL:0000632,6.09e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.25e-31!22;UBERON:0007499!4.25e-31!22;UBERON:0006925!4.25e-31!22;UBERON:0009497!4.25e-31!22;UBERON:0000015!4.25e-31!22;UBERON:0002423!4.25e-31!22;UBERON:0006235!4.25e-31!22;UBERON:0008835!4.25e-31!22;UBERON:0003894!4.25e-31!22;UBERON:0004161!4.25e-31!22;UBERON:0008836!4.25e-31!22;UBERON:0009854!1.66e-29!23;UBERON:0009856!1.66e-29!23;UBERON:0002365!1.04e-26!25;UBERON:0002330!1.04e-26!25;UBERON:0009569!4.00e-17!66;UBERON:0005177!2.38e-16!85;UBERON:0005256!4.65e-16!47;UBERON:0005172!3.70e-15!49;UBERON:0005173!3.70e-15!49;UBERON:0002417!3.70e-15!49;UBERON:0000916!3.70e-15!49;UBERON:0000466!2.32e-14!79;UBERON:0003914!4.12e-13!47;UBERON:0002100!4.25e-13!98;UBERON:0005911!2.56e-12!69;UBERON:0000949!1.74e-11!72;UBERON:0001041!2.67e-11!92;UBERON:0002368!3.17e-11!60;UBERON:0005057!2.06e-10!51;UBERON:0000077!2.45e-10!97;UBERON:0002530!6.38e-10!65;UBERON:0003929!2.71e-09!55;UBERON:0000025!2.96e-09!114;UBERON:0004111!3.76e-08!122;UBERON:0003104!8.30e-08!131;UBERON:0009142!8.30e-08!131;UBERON:0004921!5.39e-07!126;UBERON:0004185!5.39e-07!126;UBERON:0000490!6.05e-07!66;UBERON:0001007!8.96e-07!128;UBERON:0001555!8.96e-07!128;UBERON:0007026!8.96e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.15e-48,22;UBERON:0007499,6.15e-48,22;UBERON:0006925,6.15e-48,22;UBERON:0009497,6.15e-48,22;UBERON:0000015,6.15e-48,22;UBERON:0002423,6.15e-48,22;UBERON:0006235,6.15e-48,22;UBERON:0008835,6.15e-48,22;UBERON:0003894,6.15e-48,22;UBERON:0004161,6.15e-48,22;UBERON:0008836,6.15e-48,22;UBERON:0009854,8.68e-46,23;UBERON:0009856,8.68e-46,23;UBERON:0002365,5.28e-42,25;UBERON:0002330,5.28e-42,25;UBERON:0005256,1.27e-22,45;UBERON:0003914,1.38e-21,47;UBERON:0005172,1.23e-20,49;UBERON:0005173,1.23e-20,49;UBERON:0002417,1.23e-20,49;UBERON:0000916,1.23e-20,49;UBERON:0003929,3.37e-18,55;UBERON:0002368,1.55e-16,60;UBERON:0003104,3.09e-16,61;UBERON:0009142,3.09e-16,61;UBERON:0002530,3.96e-15,65;UBERON:0000490,7.14e-15,66;UBERON:0009569,7.14e-15,66;UBERON:0005911,3.78e-14,69;UBERON:0000949,1.75e-13,72;UBERON:0005177,3.97e-12,79;UBERON:0001041,5.94e-12,80;UBERON:0002100,2.04e-10,90;UBERON:0000025,8.08e-08,114;UBERON:0004921,8.08e-08,114;UBERON:0001007,1.19e-07,116;UBERON:0001555,1.19e-07,116;UBERON:0007026,1.19e-07,116;UBERON:0004119,1.74e-07,118;UBERON:0000925,1.74e-07,118;UBERON:0006595,1.74e-07,118;UBERON:0004111,3.55e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,0,3.44169550792555,4.75979933595425,5.39703191637817,3.24888208723835,2.68816132258401,1.68533304158102,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55743152504579,0.500535317148282,0,0.449724224769707,0.202860121388503,0,0.763877555344259,0.575392274901621,1.78348749452539,1.64736847912849,2.87536413054709,3.34926852901653,5.61667811606209,3.78868316920668,2.33216637578486,3.85954817090694,0.739012760666419,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Rbp4 | |||
}} |
Revision as of 17:30, 13 September 2013
Short description: | p4@Rbp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rbp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 66bp_to_ENSMUST00000025951, NM_001159487, uc008hje.2_5end |
EntrezGene: | Rbp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.09e-18 | 5 |
fibroblast | 6.09e-07 | 1 |
hepatic stellate cell | 6.09e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.