FFCP PHASE1:Hg19::chr6:15022187..15022205,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C49|description=CAGE_peak_at_chr6:15022187..15022205,-|id=chr6:15022187..15022205,-|ontology_enrichment_celltype=CL:0002322!2.29e-26!5;CL:0000039!5.97e-19!7;CL:0000586!5.97e-19!7;CL:0000540!1.36e-08!6;CL:0000031!1.36e-08!6;CL:0000404!1.36e-08!6;CL:0002541!1.69e-07!3|ontology_enrichment_celltype_v019=CL:0002322;2.07e-61;5!CL:0000039;3.20e-29;7!CL:0000586;3.20e-29;7!CL:0002321;1.43e-20;15!CL:0000540;3.01e-19;6!CL:0000404;3.01e-19;6!CL:0000148;1.38e-11;10!CL:0000147;1.96e-08;14|ontology_enrichment_celltype_v019_2=CL:0002322,3.01e-61,5;CL:0000039,3.57e-29,7;CL:0000586,3.57e-29,7;CL:0000540,2.34e-19,6;CL:0000031,2.34e-19,6;CL:0000404,2.34e-19,6;CL:0000047,1.11e-14,8;CL:0000148,1.52e-11,10;CL:0000541,1.52e-11,10;CL:0000147,2.09e-08,14;CL:0000133,6.04e-07,59|ontology_enrichment_development_v019=UBERON:0009117;1.43e-20;10!UBERON:0005564;1.43e-20;10!CL:0000031;3.01e-19;6|ontology_enrichment_disease=DOID:3095!7.95e-11!22;DOID:2994!7.95e-11!22|ontology_enrichment_disease_v019=DOID:3095;2.32e-14;22!DOID:2994;2.32e-14;22|ontology_enrichment_disease_v019_2=DOID:3095,2.39e-14,22;DOID:2994,2.39e-14,22|ontology_enrichment_uberon=UBERON:0000473!4.73e-11!8;UBERON:0003135!4.80e-08!11;UBERON:0000476!1.69e-07!3;UBERON:0000920!1.69e-07!3;UBERON:0003124!7.48e-07!7|ontology_enrichment_uberon_v019=UBERON:0000473;1.28e-25;8!UBERON:0003135;9.88e-19;11!UBERON:0000922;1.87e-12;49!UBERON:0000991;6.14e-10;21!UBERON:0003101;1.70e-09;22!UBERON:0000079;1.70e-09;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.41e-25,8;UBERON:0003135,1.06e-18,11;UBERON:0000991,6.35e-10,21;UBERON:0009196,6.35e-10,21;UBERON:0009117,6.35e-10,21;UBERON:0005564,6.35e-10,21;UBERON:0004176,1.76e-09,22;UBERON:0003101,1.76e-09,22;UBERON:0000079,1.76e-09,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48881677583179,3.04818467139416,1.2781333715647,1.34759371519982,1.7662459561294,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,2.1060976908219,1.65018999841176,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76828463311521,2.88832816854191,4.56984371832104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,3.71502944676565,0,8.26109520910052,6.94765253690457,4.41095517767256,2.005660314339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p@chr6:15022187..15022205,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr6:15022187..15022205,- | |||
|id=chr6:15022187..15022205,- | |||
|ontology_enrichment_celltype=CL:0002322!2.29e-26!5;CL:0000039!5.97e-19!7;CL:0000586!5.97e-19!7;CL:0000540!1.36e-08!6;CL:0000031!1.36e-08!6;CL:0000404!1.36e-08!6;CL:0002541!1.69e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.07e-61;5!CL:0000039;3.20e-29;7!CL:0000586;3.20e-29;7!CL:0002321;1.43e-20;15!CL:0000540;3.01e-19;6!CL:0000404;3.01e-19;6!CL:0000148;1.38e-11;10!CL:0000147;1.96e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.01e-61,5;CL:0000039,3.57e-29,7;CL:0000586,3.57e-29,7;CL:0000540,2.34e-19,6;CL:0000031,2.34e-19,6;CL:0000404,2.34e-19,6;CL:0000047,1.11e-14,8;CL:0000148,1.52e-11,10;CL:0000541,1.52e-11,10;CL:0000147,2.09e-08,14;CL:0000133,6.04e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.43e-20;10!UBERON:0005564;1.43e-20;10!CL:0000031;3.01e-19;6 | |||
|ontology_enrichment_disease=DOID:3095!7.95e-11!22;DOID:2994!7.95e-11!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.32e-14;22!DOID:2994;2.32e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.39e-14,22;DOID:2994,2.39e-14,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.73e-11!8;UBERON:0003135!4.80e-08!11;UBERON:0000476!1.69e-07!3;UBERON:0000920!1.69e-07!3;UBERON:0003124!7.48e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.28e-25;8!UBERON:0003135;9.88e-19;11!UBERON:0000922;1.87e-12;49!UBERON:0000991;6.14e-10;21!UBERON:0003101;1.70e-09;22!UBERON:0000079;1.70e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.41e-25,8;UBERON:0003135,1.06e-18,11;UBERON:0000991,6.35e-10,21;UBERON:0009196,6.35e-10,21;UBERON:0009117,6.35e-10,21;UBERON:0005564,6.35e-10,21;UBERON:0004176,1.76e-09,22;UBERON:0003101,1.76e-09,22;UBERON:0000079,1.76e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48881677583179,3.04818467139416,1.2781333715647,1.34759371519982,1.7662459561294,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,2.1060976908219,1.65018999841176,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76828463311521,2.88832816854191,4.56984371832104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,3.71502944676565,0,8.26109520910052,6.94765253690457,4.41095517767256,2.005660314339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr6:15022187..15022205,- | |||
}} |
Revision as of 18:42, 13 September 2013
Short description: | p@chr6:15022187..15022205, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:15022187..15022205, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.01e-61 | 5 |
germ line cell | 3.57e-29 | 7 |
germ cell | 3.57e-29 | 7 |
neuron | 2.34e-19 | 6 |
neuroblast | 2.34e-19 | 6 |
electrically signaling cell | 2.34e-19 | 6 |
neuronal stem cell | 1.11e-14 | 8 |
melanocyte | 1.52e-11 | 10 |
melanoblast | 1.52e-11 | 10 |
pigment cell | 2.09e-08 | 14 |
neurectodermal cell | 6.04e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 1.41e-25 | 8 |
male reproductive organ | 1.06e-18 | 11 |
gonad | 6.35e-10 | 21 |
indifferent external genitalia | 6.35e-10 | 21 |
indifferent gonad | 6.35e-10 | 21 |
gonad primordium | 6.35e-10 | 21 |
external genitalia | 1.76e-09 | 22 |
male organism | 1.76e-09 | 22 |
male reproductive system | 1.76e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.39e-14 | 22 |
germ cell cancer | 2.39e-14 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.