FFCP PHASE1:Mm9::chr1:133870870..133870918,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=110|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:133870870..133870918,+|id=chr1:133870870..133870918,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,2.98e-15,3;CL:0002202,2.98e-15,3;CL:0000069,2.98e-15,3;CL:0002632,2.98e-15,3;CL:0002368,2.98e-15,3;CL:0000307,2.98e-15,3;CL:0000377,2.98e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!2.23e-15!128;UBERON:0001555!2.23e-15!128;UBERON:0007026!2.23e-15!128;UBERON:0004119!6.47e-15!130;UBERON:0000925!6.47e-15!130;UBERON:0006595!6.47e-15!130;UBERON:0004921!8.06e-14!126;UBERON:0004185!8.06e-14!126;UBERON:0000945!7.80e-11!16;UBERON:0010039!7.80e-11!16;UBERON:0005409!7.89e-11!59;UBERON:0000077!7.24e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.98e-15,3;UBERON:0001005,2.98e-15,3;UBERON:0007196,2.98e-15,3;UBERON:0001558,2.98e-15,3;UBERON:0000945,2.86e-14,16;UBERON:0010039,2.86e-14,16;UBERON:0001007,1.07e-10,116;UBERON:0001555,1.07e-10,116;UBERON:0007026,1.07e-10,116;UBERON:0005409,1.07e-10,47;UBERON:0004119,1.80e-10,118;UBERON:0000925,1.80e-10,118;UBERON:0006595,1.80e-10,118;UBERON:0001962,1.20e-09,2;UBERON:0001961,1.20e-09,2;UBERON:0001744,1.20e-09,2;UBERON:0004921,2.60e-08,114;UBERON:0001041,8.47e-07,80|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0,0,0,1.27993938234725,1.14704640533585,1.14846392823004,0.430761996159075,0.646413698057667,0,0,1.77384408524244,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,5.19578498426914,5.32055717497707,4.04419556011827,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0.444756087689741,0,0,0,0.502670417600539,0.596869416123452,0,0.898819408654221,1.29682829924817,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,1.43768206527355,0.744281895337007,0,0,0,1.4473305640901,0.369506380333209,0,0,0,0,0,0.714130922658041,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328281799490123,0.582961673259701,0,0.512612642393558,0.206386867963223,0,0.188368457004691,0,0,0,0,0,19.0934123603023,0,0.609958401380546,0.86404272657441,2.50905955217362,2.83871332870031,4.98998081623837,8.92657321833628,12.8260411572175,2.59229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0|short_description=p@chr1:133870870..133870918,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=110 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:133870870..133870918,+ | |||
|id=chr1:133870870..133870918,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.98e-15,3;CL:0002202,2.98e-15,3;CL:0000069,2.98e-15,3;CL:0002632,2.98e-15,3;CL:0002368,2.98e-15,3;CL:0000307,2.98e-15,3;CL:0000377,2.98e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!2.23e-15!128;UBERON:0001555!2.23e-15!128;UBERON:0007026!2.23e-15!128;UBERON:0004119!6.47e-15!130;UBERON:0000925!6.47e-15!130;UBERON:0006595!6.47e-15!130;UBERON:0004921!8.06e-14!126;UBERON:0004185!8.06e-14!126;UBERON:0000945!7.80e-11!16;UBERON:0010039!7.80e-11!16;UBERON:0005409!7.89e-11!59;UBERON:0000077!7.24e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.98e-15,3;UBERON:0001005,2.98e-15,3;UBERON:0007196,2.98e-15,3;UBERON:0001558,2.98e-15,3;UBERON:0000945,2.86e-14,16;UBERON:0010039,2.86e-14,16;UBERON:0001007,1.07e-10,116;UBERON:0001555,1.07e-10,116;UBERON:0007026,1.07e-10,116;UBERON:0005409,1.07e-10,47;UBERON:0004119,1.80e-10,118;UBERON:0000925,1.80e-10,118;UBERON:0006595,1.80e-10,118;UBERON:0001962,1.20e-09,2;UBERON:0001961,1.20e-09,2;UBERON:0001744,1.20e-09,2;UBERON:0004921,2.60e-08,114;UBERON:0001041,8.47e-07,80 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0,0,0,1.27993938234725,1.14704640533585,1.14846392823004,0.430761996159075,0.646413698057667,0,0,1.77384408524244,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,5.19578498426914,5.32055717497707,4.04419556011827,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0.444756087689741,0,0,0,0.502670417600539,0.596869416123452,0,0.898819408654221,1.29682829924817,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,1.43768206527355,0.744281895337007,0,0,0,1.4473305640901,0.369506380333209,0,0,0,0,0,0.714130922658041,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328281799490123,0.582961673259701,0,0.512612642393558,0.206386867963223,0,0.188368457004691,0,0,0,0,0,19.0934123603023,0,0.609958401380546,0.86404272657441,2.50905955217362,2.83871332870031,4.98998081623837,8.92657321833628,12.8260411572175,2.59229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p@chr1:133870870..133870918,+ | |||
}} |
Revision as of 18:49, 13 September 2013
Short description: | p@chr1:133870870..133870918, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:133870870..133870918, + |
Coexpression cluster: | MCL_coexpression_mm9:110 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.98e-15 | 3 |
epithelial cell of tracheobronchial tree | 2.98e-15 | 3 |
branched duct epithelial cell | 2.98e-15 | 3 |
epithelial cell of lower respiratory tract | 2.98e-15 | 3 |
respiratory epithelial cell | 2.98e-15 | 3 |
tracheal epithelial cell | 2.98e-15 | 3 |
tracheoblast | 2.98e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.98e-15 | 3 |
respiratory airway | 2.98e-15 | 3 |
tracheobronchial tree | 2.98e-15 | 3 |
lower respiratory tract | 2.98e-15 | 3 |
stomach | 2.86e-14 | 16 |
food storage organ | 2.86e-14 | 16 |
digestive system | 1.07e-10 | 116 |
digestive tract | 1.07e-10 | 116 |
primitive gut | 1.07e-10 | 116 |
gastrointestinal system | 1.07e-10 | 47 |
endoderm-derived structure | 1.80e-10 | 118 |
endoderm | 1.80e-10 | 118 |
presumptive endoderm | 1.80e-10 | 118 |
gut-associated lymphoid tissue | 1.20e-09 | 2 |
mucosa-associated lymphoid tissue | 1.20e-09 | 2 |
lymphoid tissue | 1.20e-09 | 2 |
subdivision of digestive tract | 2.60e-08 | 114 |
foregut | 8.47e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.