FFCP PHASE1:Mm9::chr1:135811867..135811872,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=447|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:135811867..135811872,-|id=chr1:135811867..135811872,-|ontology_enrichment_celltype=CL:0002453!7.82e-11!8;CL:0000333!2.16e-08!10;CL:0000095!2.16e-08!10;CL:0000243!2.16e-08!10;CL:0000123!2.16e-08!10;CL:0000125!2.16e-08!10;CL:0000030!2.16e-08!10;CL:0000339!2.16e-08!10;CL:0000128!5.74e-08!6;CL:0000126!5.74e-08!6;CL:0000127!5.74e-08!6|ontology_enrichment_celltype_v019_2=CL:0002605,3.19e-26,2;CL:0002604,3.19e-26,2;CL:0000128,1.83e-19,6;CL:0000126,1.83e-19,6;CL:0000127,1.83e-19,6;CL:0000192,7.36e-18,3;CL:0000359,7.36e-18,3;CL:0002539,7.36e-18,3;CL:0000514,7.36e-18,3;CL:0002453,8.47e-15,8;CL:0000333,5.47e-12,10;CL:0000095,5.47e-12,10;CL:0000243,5.47e-12,10;CL:0000123,5.47e-12,10;CL:0000125,5.47e-12,10;CL:0000030,5.47e-12,10;CL:0000339,5.47e-12,10;CL:0000680,1.96e-09,6;CL:0000187,1.96e-09,6;CL:0000056,1.96e-09,6;CL:0000222,3.21e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.15e-28,4;UBERON:0001637,1.15e-28,4;UBERON:0004573,1.15e-28,4;UBERON:0003509,1.15e-28,4;UBERON:0004571,1.15e-28,4;UBERON:0010191,1.15e-28,4;UBERON:0004572,1.15e-28,4;UBERON:0000055,4.12e-23,5;UBERON:0007500,4.12e-23,5;UBERON:0001981,4.12e-23,5;UBERON:0002049,4.12e-23,5;UBERON:0007798,4.12e-23,5;UBERON:0004537,4.12e-23,5;UBERON:0006965,4.12e-23,5;UBERON:0001135,7.36e-18,3;UBERON:0004237,7.36e-18,3;UBERON:0004695,7.36e-18,3;UBERON:0002111,7.36e-18,3;UBERON:0004178,7.36e-18,3;UBERON:0001954,3.21e-08,7;UBERON:0003022,3.21e-08,7;UBERON:0002421,3.21e-08,7;UBERON:0000349,3.21e-08,7;UBERON:0002600,3.21e-08,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,1.72340783073175,0,0,0.218025156380447,1.75748946187577,2.52758868796568,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0.519572009205738,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0,0,0,0.117588707135705,0,0,1.15679485535929,0,0.323533699894818,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,1.4473305640901,0.739012760666419,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0,0,0,0,0.809621403349789,0.584511715822624,0.395287777946524,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p@chr1:135811867..135811872,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=447 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:135811867..135811872,- | |||
|id=chr1:135811867..135811872,- | |||
|ontology_enrichment_celltype=CL:0002453!7.82e-11!8;CL:0000333!2.16e-08!10;CL:0000095!2.16e-08!10;CL:0000243!2.16e-08!10;CL:0000123!2.16e-08!10;CL:0000125!2.16e-08!10;CL:0000030!2.16e-08!10;CL:0000339!2.16e-08!10;CL:0000128!5.74e-08!6;CL:0000126!5.74e-08!6;CL:0000127!5.74e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.19e-26,2;CL:0002604,3.19e-26,2;CL:0000128,1.83e-19,6;CL:0000126,1.83e-19,6;CL:0000127,1.83e-19,6;CL:0000192,7.36e-18,3;CL:0000359,7.36e-18,3;CL:0002539,7.36e-18,3;CL:0000514,7.36e-18,3;CL:0002453,8.47e-15,8;CL:0000333,5.47e-12,10;CL:0000095,5.47e-12,10;CL:0000243,5.47e-12,10;CL:0000123,5.47e-12,10;CL:0000125,5.47e-12,10;CL:0000030,5.47e-12,10;CL:0000339,5.47e-12,10;CL:0000680,1.96e-09,6;CL:0000187,1.96e-09,6;CL:0000056,1.96e-09,6;CL:0000222,3.21e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.15e-28,4;UBERON:0001637,1.15e-28,4;UBERON:0004573,1.15e-28,4;UBERON:0003509,1.15e-28,4;UBERON:0004571,1.15e-28,4;UBERON:0010191,1.15e-28,4;UBERON:0004572,1.15e-28,4;UBERON:0000055,4.12e-23,5;UBERON:0007500,4.12e-23,5;UBERON:0001981,4.12e-23,5;UBERON:0002049,4.12e-23,5;UBERON:0007798,4.12e-23,5;UBERON:0004537,4.12e-23,5;UBERON:0006965,4.12e-23,5;UBERON:0001135,7.36e-18,3;UBERON:0004237,7.36e-18,3;UBERON:0004695,7.36e-18,3;UBERON:0002111,7.36e-18,3;UBERON:0004178,7.36e-18,3;UBERON:0001954,3.21e-08,7;UBERON:0003022,3.21e-08,7;UBERON:0002421,3.21e-08,7;UBERON:0000349,3.21e-08,7;UBERON:0002600,3.21e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,1.72340783073175,0,0,0.218025156380447,1.75748946187577,2.52758868796568,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0.519572009205738,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0,0,0,0.117588707135705,0,0,1.15679485535929,0,0.323533699894818,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,1.4473305640901,0.739012760666419,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0,0,0,0,0.809621403349789,0.584511715822624,0.395287777946524,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr1:135811867..135811872,- | |||
}} |
Revision as of 18:55, 13 September 2013
Short description: | p@chr1:135811867..135811872, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135811867..135811872, - |
Coexpression cluster: | MCL_coexpression_mm9:447 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.19e-26 | 2 |
astrocyte of the hippocampus | 3.19e-26 | 2 |
oligodendrocyte | 1.83e-19 | 6 |
macroglial cell | 1.83e-19 | 6 |
astrocyte | 1.83e-19 | 6 |
smooth muscle cell | 7.36e-18 | 3 |
vascular associated smooth muscle cell | 7.36e-18 | 3 |
aortic smooth muscle cell | 7.36e-18 | 3 |
smooth muscle myoblast | 7.36e-18 | 3 |
oligodendrocyte precursor cell | 8.47e-15 | 8 |
migratory neural crest cell | 5.47e-12 | 10 |
neuron associated cell | 5.47e-12 | 10 |
glial cell (sensu Vertebrata) | 5.47e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 5.47e-12 | 10 |
glial cell | 5.47e-12 | 10 |
glioblast | 5.47e-12 | 10 |
glioblast (sensu Vertebrata) | 5.47e-12 | 10 |
muscle precursor cell | 1.96e-09 | 6 |
muscle cell | 1.96e-09 | 6 |
myoblast | 1.96e-09 | 6 |
mesodermal cell | 3.21e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
aorta | 1.15e-28 | 4 |
artery | 1.15e-28 | 4 |
systemic artery | 1.15e-28 | 4 |
arterial blood vessel | 1.15e-28 | 4 |
systemic arterial system | 1.15e-28 | 4 |
aortic system | 1.15e-28 | 4 |
arterial system | 1.15e-28 | 4 |
vessel | 4.12e-23 | 5 |
epithelial tube open at both ends | 4.12e-23 | 5 |
blood vessel | 4.12e-23 | 5 |
vasculature | 4.12e-23 | 5 |
vascular system | 4.12e-23 | 5 |
blood vasculature | 4.12e-23 | 5 |
vascular cord | 4.12e-23 | 5 |
smooth muscle tissue | 7.36e-18 | 3 |
blood vessel smooth muscle | 7.36e-18 | 3 |
arterial system smooth muscle | 7.36e-18 | 3 |
artery smooth muscle tissue | 7.36e-18 | 3 |
aorta smooth muscle tissue | 7.36e-18 | 3 |
Ammon's horn | 3.21e-08 | 7 |
lobe parts of cerebral cortex | 3.21e-08 | 7 |
hippocampal formation | 3.21e-08 | 7 |
limbic system | 3.21e-08 | 7 |
limbic lobe | 3.21e-08 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.