FFCP PHASE1:Hg19::chr6:32077019..32077030,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7148|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11976|TSSclassifier=S|UniProt=|association_with_transcript=-21bp_to_ENST00000486148_5end|coexpression_cluster_id=C68|description=CAGE_peak_4_at_TNXB_5end|id=chr6:32077019..32077030,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002577;3.89e-15;3!CL:0000349;6.89e-15;19!CL:0002537;2.34e-09;5!CL:0000214;2.97e-07;3!CL:0002541;4.04e-07;3|ontology_enrichment_celltype_v019_2=CL:0002577,3.92e-15,3;CL:0000349,8.93e-15,19;CL:0002537,2.45e-09,5;CL:0000214,2.64e-07,3;CL:0002541,5.82e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.19e-22!115;UBERON:0005631!2.41e-12!14;UBERON:0000158!2.41e-12!14;UBERON:0004923!7.01e-09!57;UBERON:0003124!1.42e-08!7;UBERON:0001987!2.32e-07!4;UBERON:0004340!2.32e-07!4|ontology_enrichment_uberon_v019=UBERON:0005631;8.95e-12;10!UBERON:0000158;8.95e-12;10!UBERON:0000478;1.67e-11;24!UBERON:0001987;1.82e-11;4!UBERON:0002133;1.20e-10;2!UBERON:0003978;2.32e-07;3!UBERON:0000946;2.32e-07;3!UBERON:0006915;2.97e-07;3!UBERON:0007616;2.97e-07;3!UBERON:0002217;2.97e-07;3!UBERON:0002018;2.97e-07;3!UBERON:0003124;4.04e-07;3!UBERON:0000920;4.04e-07;3!UBERON:0001723;5.14e-07;3!UBERON:0001033;5.14e-07;3!UBERON:0000305;8.69e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.56e-20,14;UBERON:0000158,1.56e-20,14;UBERON:0003124,1.18e-16,7;UBERON:0001987,1.83e-11,4;UBERON:0004340,1.83e-11,4;UBERON:0000478,2.04e-11,24;UBERON:0002133,1.21e-10,2;UBERON:0004923,2.77e-09,66;UBERON:0007023,1.35e-08,114;UBERON:0003978,2.33e-07,3;UBERON:0009751,2.33e-07,3;UBERON:0000946,2.33e-07,3;UBERON:0002523,2.33e-07,3;UBERON:0005983,2.33e-07,3;UBERON:0002165,2.33e-07,3;UBERON:0002062,2.33e-07,3;UBERON:0007280,2.33e-07,3;UBERON:0006915,2.64e-07,3;UBERON:0007616,2.64e-07,3;UBERON:0002217,2.64e-07,3;UBERON:0002018,2.64e-07,3;UBERON:0001723,5.00e-07,3;UBERON:0001033,5.00e-07,3;UBERON:0010056,5.00e-07,3;UBERON:0000920,5.82e-07,3;UBERON:0004145,5.99e-07,3;UBERON:0000305,8.97e-07,7|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.434539556882471,0,0.486634870302636,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0,0,0,0,1.13152239773168,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,0.699810938274399,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,2.12189300012382,6.65741758041988,5.14063498660456,0.248107807818777,0,1.12264037773229,1.79394808957981,0,0,1.48418066444991,0,0.177561725313127,0,0,0.464841513839837,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,2.74439925886963,2.30506425071931,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,1.31857361344705,0,0,0,21.9644925958675,2.07875276582847,23.9585347637401,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,1.61595542857974,0,0,0,0,6.69902435437031,0,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,1.99052386215701,0.707660516026713,0,0,0,0,0.067401132980677,6.42062117839031,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,1.16386819786103,0,0.90392296312213,0,0,0,0,0,1.92107695265417,6.39390750662817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0721064139948,0.458320848023367,3.58936512288407,0.599037001496973,0,1.78537165953498,1.07493555978762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.854299300541557,0.157204305099666,1.24271716604159,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,1.66441758450784,0,0,0,0.228840068396924,1.81477108515887,0.15543720058278,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,1.26184898228651,0.385239660814607,0.643324774124777,0,0,0,0.489473409012935,0,0,0.438568099157414,0,0.38582807654183,1.8583668471838,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,2.03067886542995,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,1.98484471355718,0,0,0,0,0,0,0.532214220975833,0,0.171488009437418,0.0679697329768317,0.131545547125698,0,0,0.549451649953598,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,1.02662806856247,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0.735444965261716,0,0,0,0.4226557275834,0,0.845855261818682,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,1.28823786971007,0,0,0.20686599172379,1.70587185520785,0.476128862927481,0.0645889098360061,0.124149428591716,0,0.381882949668989,0.606351566874658,2.17716747896961,1.36893320434112,0.336760265072938,0.430333232356058,1.33064142618405,0,0,0,0,0,1.1001729976458,0,0,1.40891655513718,0|short_description=p4@TNXB}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7148 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11976 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_ENST00000486148_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_4_at_TNXB_5end | |||
|id=chr6:32077019..32077030,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;3.89e-15;3!CL:0000349;6.89e-15;19!CL:0002537;2.34e-09;5!CL:0000214;2.97e-07;3!CL:0002541;4.04e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,3.92e-15,3;CL:0000349,8.93e-15,19;CL:0002537,2.45e-09,5;CL:0000214,2.64e-07,3;CL:0002541,5.82e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.19e-22!115;UBERON:0005631!2.41e-12!14;UBERON:0000158!2.41e-12!14;UBERON:0004923!7.01e-09!57;UBERON:0003124!1.42e-08!7;UBERON:0001987!2.32e-07!4;UBERON:0004340!2.32e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.95e-12;10!UBERON:0000158;8.95e-12;10!UBERON:0000478;1.67e-11;24!UBERON:0001987;1.82e-11;4!UBERON:0002133;1.20e-10;2!UBERON:0003978;2.32e-07;3!UBERON:0000946;2.32e-07;3!UBERON:0006915;2.97e-07;3!UBERON:0007616;2.97e-07;3!UBERON:0002217;2.97e-07;3!UBERON:0002018;2.97e-07;3!UBERON:0003124;4.04e-07;3!UBERON:0000920;4.04e-07;3!UBERON:0001723;5.14e-07;3!UBERON:0001033;5.14e-07;3!UBERON:0000305;8.69e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.56e-20,14;UBERON:0000158,1.56e-20,14;UBERON:0003124,1.18e-16,7;UBERON:0001987,1.83e-11,4;UBERON:0004340,1.83e-11,4;UBERON:0000478,2.04e-11,24;UBERON:0002133,1.21e-10,2;UBERON:0004923,2.77e-09,66;UBERON:0007023,1.35e-08,114;UBERON:0003978,2.33e-07,3;UBERON:0009751,2.33e-07,3;UBERON:0000946,2.33e-07,3;UBERON:0002523,2.33e-07,3;UBERON:0005983,2.33e-07,3;UBERON:0002165,2.33e-07,3;UBERON:0002062,2.33e-07,3;UBERON:0007280,2.33e-07,3;UBERON:0006915,2.64e-07,3;UBERON:0007616,2.64e-07,3;UBERON:0002217,2.64e-07,3;UBERON:0002018,2.64e-07,3;UBERON:0001723,5.00e-07,3;UBERON:0001033,5.00e-07,3;UBERON:0010056,5.00e-07,3;UBERON:0000920,5.82e-07,3;UBERON:0004145,5.99e-07,3;UBERON:0000305,8.97e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.434539556882471,0,0.486634870302636,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0,0,0,0,1.13152239773168,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,0.699810938274399,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,2.12189300012382,6.65741758041988,5.14063498660456,0.248107807818777,0,1.12264037773229,1.79394808957981,0,0,1.48418066444991,0,0.177561725313127,0,0,0.464841513839837,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,2.74439925886963,2.30506425071931,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,1.31857361344705,0,0,0,21.9644925958675,2.07875276582847,23.9585347637401,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,1.61595542857974,0,0,0,0,6.69902435437031,0,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,1.99052386215701,0.707660516026713,0,0,0,0,0.067401132980677,6.42062117839031,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,1.16386819786103,0,0.90392296312213,0,0,0,0,0,1.92107695265417,6.39390750662817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0721064139948,0.458320848023367,3.58936512288407,0.599037001496973,0,1.78537165953498,1.07493555978762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.854299300541557,0.157204305099666,1.24271716604159,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,1.66441758450784,0,0,0,0.228840068396924,1.81477108515887,0.15543720058278,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,1.26184898228651,0.385239660814607,0.643324774124777,0,0,0,0.489473409012935,0,0,0.438568099157414,0,0.38582807654183,1.8583668471838,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,2.03067886542995,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,1.98484471355718,0,0,0,0,0,0,0.532214220975833,0,0.171488009437418,0.0679697329768317,0.131545547125698,0,0,0.549451649953598,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,1.02662806856247,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0.735444965261716,0,0,0,0.4226557275834,0,0.845855261818682,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,1.28823786971007,0,0,0.20686599172379,1.70587185520785,0.476128862927481,0.0645889098360061,0.124149428591716,0,0.381882949668989,0.606351566874658,2.17716747896961,1.36893320434112,0.336760265072938,0.430333232356058,1.33064142618405,0,0,0,0,0,1.1001729976458,0,0,1.40891655513718,0 | |||
|short_description=p4@TNXB | |||
}} |
Revision as of 20:20, 13 September 2013
Short description: | p4@TNXB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TNXB_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -21bp_to_ENST00000486148_5end |
EntrezGene: | TNXB |
HGNC: | 11976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 3.92e-15 | 3 |
extraembryonic cell | 8.93e-15 | 19 |
amnion mesenchymal stem cell | 2.45e-09 | 5 |
synovial cell | 2.64e-07 | 3 |
chorionic membrane mesenchymal stem cell | 5.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.56e-20 | 14 |
membranous layer | 1.56e-20 | 14 |
chorion | 1.18e-16 | 7 |
placenta | 1.83e-11 | 4 |
allantois | 1.83e-11 | 4 |
extraembryonic structure | 2.04e-11 | 24 |
atrioventricular valve | 1.21e-10 | 2 |
organ component layer | 2.77e-09 | 66 |
adult organism | 1.35e-08 | 114 |
valve | 2.33e-07 | 3 |
cardiac mesenchyme | 2.33e-07 | 3 |
cardial valve | 2.33e-07 | 3 |
tunica intima | 2.33e-07 | 3 |
heart layer | 2.33e-07 | 3 |
endocardium | 2.33e-07 | 3 |
endocardial cushion | 2.33e-07 | 3 |
presumptive endocardium | 2.33e-07 | 3 |
stratified squamous epithelium | 2.64e-07 | 3 |
layer of synovial tissue | 2.64e-07 | 3 |
synovial joint | 2.64e-07 | 3 |
synovial membrane of synovial joint | 2.64e-07 | 3 |
tongue | 5.00e-07 | 3 |
gustatory system | 5.00e-07 | 3 |
future tongue | 5.00e-07 | 3 |
egg chorion | 5.82e-07 | 3 |
outflow tract | 5.99e-07 | 3 |
amnion | 8.97e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.