FFCP PHASE1:Hg19::chr6:32152064..32152075,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=177|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=320|TSSclassifier=S|UniProt=B4DNX3,Q15109,Q3L1S0,Q3L1R8,Q3L1R5,Q3L1R7,Q3L1R6,A7Y2U9|association_with_transcript=23bp_to_NM_001136,NM_001206929,NM_001206932,NM_001206934,NM_001206936,NM_001206940,NM_001206954,NM_001206966,NM_172197,NR_038190_5end|coexpression_cluster_id=C308|description=CAGE_peak_3_at_AGER_5end|id=chr6:32152064..32152075,-|ontology_enrichment_celltype=CL:0002541!6.56e-13!3;CL:0000039!4.45e-12!7;CL:0000586!4.45e-12!7|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;1.85e-08;29!UBERON:0001041;3.38e-08;30|ontology_enrichment_disease=DOID:3095!4.80e-10!22;DOID:2994!4.80e-10!22|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000476!6.56e-13!3;UBERON:0000920!6.56e-13!3;UBERON:0002171!7.40e-11!1;UBERON:0006518!7.40e-11!1;UBERON:0008949!7.40e-11!1;UBERON:0000101!7.40e-11!1;UBERON:0002167!7.40e-11!1;UBERON:0005631!1.51e-10!14;UBERON:0000158!1.51e-10!14;UBERON:0002046!3.65e-08!5;UBERON:0004117!3.65e-08!5;UBERON:0007689!3.65e-08!5;UBERON:0007123!3.65e-08!5;UBERON:0003091!3.65e-08!5;UBERON:0002048!4.94e-07!22;UBERON:0000117!4.94e-07!22;UBERON:0000171!4.94e-07!22;UBERON:0000170!4.94e-07!22;UBERON:0005597!4.94e-07!22;UBERON:0000118!4.94e-07!22|ontology_enrichment_uberon_v019=UBERON:0002171;2.78e-26;1!UBERON:0006518;2.78e-26;1!UBERON:0008949;2.78e-26;1!UBERON:0000101;2.78e-26;1!UBERON:0002167;2.78e-26;1!UBERON:0002048;6.05e-11;22!UBERON:0000117;6.05e-11;22!UBERON:0000171;6.05e-11;22!UBERON:0000170;6.05e-11;22|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.78e-26,1;UBERON:0006518,2.78e-26,1;UBERON:0008949,2.78e-26,1;UBERON:0000101,2.78e-26,1;UBERON:0002167,2.78e-26,1;UBERON:0002048,6.05e-11,22;UBERON:0000117,6.05e-11,22;UBERON:0000171,6.05e-11,22;UBERON:0000170,6.05e-11,22;UBERON:0005597,6.05e-11,22;UBERON:0000118,6.05e-11,22;UBERON:0005178,2.65e-07,34;UBERON:0002224,2.65e-07,34;UBERON:0005181,4.12e-07,35;UBERON:0005153,9.30e-07,37|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.79120467188971,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,9.62696204908188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67160823029439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.0923524368259,16.6636563405646,30.6536900956925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.112131862580613,1.14564884900697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@AGER}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=177 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=320 | |||
|TSSclassifier=S | |||
|UniProt=B4DNX3,Q15109,Q3L1S0,Q3L1R8,Q3L1R5,Q3L1R7,Q3L1R6,A7Y2U9 | |||
|association_with_transcript=23bp_to_NM_001136,NM_001206929,NM_001206932,NM_001206934,NM_001206936,NM_001206940,NM_001206954,NM_001206966,NM_172197,NR_038190_5end | |||
|coexpression_cluster_id=C308 | |||
|description=CAGE_peak_3_at_AGER_5end | |||
|id=chr6:32152064..32152075,- | |||
|ontology_enrichment_celltype=CL:0002541!6.56e-13!3;CL:0000039!4.45e-12!7;CL:0000586!4.45e-12!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.85e-08;29!UBERON:0001041;3.38e-08;30 | |||
|ontology_enrichment_disease=DOID:3095!4.80e-10!22;DOID:2994!4.80e-10!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!6.56e-13!3;UBERON:0000920!6.56e-13!3;UBERON:0002171!7.40e-11!1;UBERON:0006518!7.40e-11!1;UBERON:0008949!7.40e-11!1;UBERON:0000101!7.40e-11!1;UBERON:0002167!7.40e-11!1;UBERON:0005631!1.51e-10!14;UBERON:0000158!1.51e-10!14;UBERON:0002046!3.65e-08!5;UBERON:0004117!3.65e-08!5;UBERON:0007689!3.65e-08!5;UBERON:0007123!3.65e-08!5;UBERON:0003091!3.65e-08!5;UBERON:0002048!4.94e-07!22;UBERON:0000117!4.94e-07!22;UBERON:0000171!4.94e-07!22;UBERON:0000170!4.94e-07!22;UBERON:0005597!4.94e-07!22;UBERON:0000118!4.94e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.78e-26;1!UBERON:0006518;2.78e-26;1!UBERON:0008949;2.78e-26;1!UBERON:0000101;2.78e-26;1!UBERON:0002167;2.78e-26;1!UBERON:0002048;6.05e-11;22!UBERON:0000117;6.05e-11;22!UBERON:0000171;6.05e-11;22!UBERON:0000170;6.05e-11;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.78e-26,1;UBERON:0006518,2.78e-26,1;UBERON:0008949,2.78e-26,1;UBERON:0000101,2.78e-26,1;UBERON:0002167,2.78e-26,1;UBERON:0002048,6.05e-11,22;UBERON:0000117,6.05e-11,22;UBERON:0000171,6.05e-11,22;UBERON:0000170,6.05e-11,22;UBERON:0005597,6.05e-11,22;UBERON:0000118,6.05e-11,22;UBERON:0005178,2.65e-07,34;UBERON:0002224,2.65e-07,34;UBERON:0005181,4.12e-07,35;UBERON:0005153,9.30e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.79120467188971,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,9.62696204908188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67160823029439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.0923524368259,16.6636563405646,30.6536900956925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.112131862580613,1.14564884900697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@AGER | |||
}} |
Revision as of 20:21, 13 September 2013
Short description: | p3@AGER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_AGER_5end |
Coexpression cluster: | C308_lung_Hepatocyte_liver_thyroid_heart_left_breast |
Association with transcript: | 23bp_to_NM_001136, NM_001206929, NM_001206932, NM_001206934, NM_001206936, NM_001206940, NM_001206954, NM_001206966, NM_172197, NR_038190_5end |
EntrezGene: | AGER |
HGNC: | 320 |
UniProt: | B4DNX3Q15109Q3L1S0Q3L1R8Q3L1R5Q3L1R7Q3L1R6A7Y2U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.78e-26 | 1 |
right lung lobe | 2.78e-26 | 1 |
lower lobe of lung | 2.78e-26 | 1 |
lobe of lung | 2.78e-26 | 1 |
right lung | 2.78e-26 | 1 |
lung | 6.05e-11 | 22 |
respiratory tube | 6.05e-11 | 22 |
respiration organ | 6.05e-11 | 22 |
pair of lungs | 6.05e-11 | 22 |
lung primordium | 6.05e-11 | 22 |
lung bud | 6.05e-11 | 22 |
thoracic cavity element | 2.65e-07 | 34 |
thoracic cavity | 2.65e-07 | 34 |
thoracic segment organ | 4.12e-07 | 35 |
epithelial bud | 9.30e-07 | 37 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.