FFCP PHASE1:Mm9::chr1:82795025..82795037,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:82795025..82795037,-|id=chr1:82795025..82795037,-|ontology_enrichment_celltype=CL:0000115!8.50e-08!1;CL:0000213!8.50e-08!1;CL:0002078!8.50e-08!1;CL:0002262!8.50e-08!1;CL:1000398!8.50e-08!1;CL:0000355!3.90e-07!9|ontology_enrichment_celltype_v019_2=CL:0000213,1.16e-13,1;CL:0002078,1.16e-13,1;CL:0000115,1.16e-13,1;CL:0002262,1.16e-13,1;CL:1000398,1.16e-13,1;CL:0000355,3.07e-13,9|ontology_enrichment_disease=DOID:0060100!2.57e-20!3;DOID:4045!2.57e-20!3;DOID:0050686!1.86e-10!6|ontology_enrichment_disease_v019_2=DOID:0060100,4.98e-38,3;DOID:4045,4.98e-38,3;DOID:0050686,1.83e-19,6|ontology_enrichment_uberon=UBERON:0000353!8.50e-08!1;UBERON:0003497!8.50e-08!1;UBERON:0003909!8.50e-08!1;UBERON:0003835!8.50e-08!1;UBERON:0003513!8.50e-08!1;UBERON:0001281!8.50e-08!1;UBERON:0001280!8.50e-08!1;UBERON:0004647!8.50e-08!1;UBERON:0000029!1.14e-07!1;UBERON:0001097!1.14e-07!1;UBERON:0003968!1.14e-07!1;UBERON:0008785!1.14e-07!1;UBERON:0001467!1.14e-07!1;UBERON:0001421!1.14e-07!1;UBERON:0001134!3.90e-07!9;UBERON:0002036!3.90e-07!9;UBERON:0002385!3.90e-07!9;UBERON:0000486!3.90e-07!9;UBERON:0001015!3.90e-07!9;UBERON:0004290!3.90e-07!9;UBERON:0003082!3.90e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.16e-13,1;UBERON:0001281,1.16e-13,1;UBERON:0000353,1.16e-13,1;UBERON:0003497,1.16e-13,1;UBERON:0003909,1.16e-13,1;UBERON:0003928,1.16e-13,1;UBERON:0003835,1.16e-13,1;UBERON:0003513,1.16e-13,1;UBERON:0001280,1.16e-13,1;UBERON:0004647,1.16e-13,1;UBERON:0002294,1.16e-13,1;UBERON:0001173,1.16e-13,1;UBERON:0004912,1.16e-13,1;UBERON:0005171,1.16e-13,1;UBERON:0000029,2.06e-13,1;UBERON:0001097,2.06e-13,1;UBERON:0003968,2.06e-13,1;UBERON:0001467,2.06e-13,1;UBERON:0001134,3.07e-13,9;UBERON:0002036,3.07e-13,9;UBERON:0002385,3.07e-13,9;UBERON:0000486,3.07e-13,9;UBERON:0007503,3.07e-13,9;UBERON:0001015,3.07e-13,9;UBERON:0002329,3.07e-13,9;UBERON:0003082,3.07e-13,9;UBERON:0003059,3.07e-13,9;UBERON:0007282,3.07e-13,9;UBERON:0004290,3.07e-13,9;UBERON:0009618,3.07e-13,9;UBERON:0000383,5.47e-12,10;UBERON:0007524,5.80e-11,11;UBERON:0003077,5.80e-11,11;UBERON:0007285,5.80e-11,11|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0447591376858,12.5013655123808,1.57057123192139,21.7645650571475,7.5135003345429,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:82795025..82795037,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:82795025..82795037,- | |||
|id=chr1:82795025..82795037,- | |||
|ontology_enrichment_celltype=CL:0000115!8.50e-08!1;CL:0000213!8.50e-08!1;CL:0002078!8.50e-08!1;CL:0002262!8.50e-08!1;CL:1000398!8.50e-08!1;CL:0000355!3.90e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.16e-13,1;CL:0002078,1.16e-13,1;CL:0000115,1.16e-13,1;CL:0002262,1.16e-13,1;CL:1000398,1.16e-13,1;CL:0000355,3.07e-13,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.57e-20!3;DOID:4045!2.57e-20!3;DOID:0050686!1.86e-10!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.98e-38,3;DOID:4045,4.98e-38,3;DOID:0050686,1.83e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0000353!8.50e-08!1;UBERON:0003497!8.50e-08!1;UBERON:0003909!8.50e-08!1;UBERON:0003835!8.50e-08!1;UBERON:0003513!8.50e-08!1;UBERON:0001281!8.50e-08!1;UBERON:0001280!8.50e-08!1;UBERON:0004647!8.50e-08!1;UBERON:0000029!1.14e-07!1;UBERON:0001097!1.14e-07!1;UBERON:0003968!1.14e-07!1;UBERON:0008785!1.14e-07!1;UBERON:0001467!1.14e-07!1;UBERON:0001421!1.14e-07!1;UBERON:0001134!3.90e-07!9;UBERON:0002036!3.90e-07!9;UBERON:0002385!3.90e-07!9;UBERON:0000486!3.90e-07!9;UBERON:0001015!3.90e-07!9;UBERON:0004290!3.90e-07!9;UBERON:0003082!3.90e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.16e-13,1;UBERON:0001281,1.16e-13,1;UBERON:0000353,1.16e-13,1;UBERON:0003497,1.16e-13,1;UBERON:0003909,1.16e-13,1;UBERON:0003928,1.16e-13,1;UBERON:0003835,1.16e-13,1;UBERON:0003513,1.16e-13,1;UBERON:0001280,1.16e-13,1;UBERON:0004647,1.16e-13,1;UBERON:0002294,1.16e-13,1;UBERON:0001173,1.16e-13,1;UBERON:0004912,1.16e-13,1;UBERON:0005171,1.16e-13,1;UBERON:0000029,2.06e-13,1;UBERON:0001097,2.06e-13,1;UBERON:0003968,2.06e-13,1;UBERON:0001467,2.06e-13,1;UBERON:0001134,3.07e-13,9;UBERON:0002036,3.07e-13,9;UBERON:0002385,3.07e-13,9;UBERON:0000486,3.07e-13,9;UBERON:0007503,3.07e-13,9;UBERON:0001015,3.07e-13,9;UBERON:0002329,3.07e-13,9;UBERON:0003082,3.07e-13,9;UBERON:0003059,3.07e-13,9;UBERON:0007282,3.07e-13,9;UBERON:0004290,3.07e-13,9;UBERON:0009618,3.07e-13,9;UBERON:0000383,5.47e-12,10;UBERON:0007524,5.80e-11,11;UBERON:0003077,5.80e-11,11;UBERON:0007285,5.80e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0447591376858,12.5013655123808,1.57057123192139,21.7645650571475,7.5135003345429,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:82795025..82795037,- | |||
}} |
Revision as of 21:04, 13 September 2013
Short description: | p@chr1:82795025..82795037, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:82795025..82795037, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.16e-13 | 1 |
meso-epithelial cell | 1.16e-13 | 1 |
endothelial cell | 1.16e-13 | 1 |
endothelial cell of sinusoid | 1.16e-13 | 1 |
endothelial cell of hepatic sinusoid | 1.16e-13 | 1 |
multi-potent skeletal muscle stem cell | 3.07e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.16e-13 | 1 |
hepatic sinusoid | 1.16e-13 | 1 |
parenchyma | 1.16e-13 | 1 |
abdomen blood vessel | 1.16e-13 | 1 |
sinusoid | 1.16e-13 | 1 |
digestive system duct | 1.16e-13 | 1 |
abdominal segment blood vessel | 1.16e-13 | 1 |
trunk blood vessel | 1.16e-13 | 1 |
liver parenchyma | 1.16e-13 | 1 |
liver lobule | 1.16e-13 | 1 |
biliary system | 1.16e-13 | 1 |
biliary tree | 1.16e-13 | 1 |
biliary bud | 1.16e-13 | 1 |
hepatic duct | 1.16e-13 | 1 |
lymph node | 2.06e-13 | 1 |
axillary lymph node | 2.06e-13 | 1 |
peripheral lymph node | 2.06e-13 | 1 |
shoulder | 2.06e-13 | 1 |
skeletal muscle tissue | 3.07e-13 | 9 |
striated muscle tissue | 3.07e-13 | 9 |
muscle tissue | 3.07e-13 | 9 |
multilaminar epithelium | 3.07e-13 | 9 |
epithelial vesicle | 3.07e-13 | 9 |
musculature | 3.07e-13 | 9 |
somite | 3.07e-13 | 9 |
myotome | 3.07e-13 | 9 |
presomitic mesoderm | 3.07e-13 | 9 |
presumptive segmental plate | 3.07e-13 | 9 |
dermomyotome | 3.07e-13 | 9 |
trunk paraxial mesoderm | 3.07e-13 | 9 |
musculature of body | 5.47e-12 | 10 |
dense mesenchyme tissue | 5.80e-11 | 11 |
paraxial mesoderm | 5.80e-11 | 11 |
presumptive paraxial mesoderm | 5.80e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.98e-38 | 3 |
muscle cancer | 4.98e-38 | 3 |
organ system cancer | 1.83e-19 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.