FFCP PHASE1:Mm9::chr2:113589212..113589219,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=445|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:113589212..113589219,-|id=chr2:113589212..113589219,-|ontology_enrichment_celltype=CL:0000192!1.86e-10!3;CL:0000359!1.86e-10!3;CL:0002539!1.86e-10!3;CL:0000514!1.86e-10!3|ontology_enrichment_celltype_v019_2=CL:0000192,8.02e-16,3;CL:0000359,8.02e-16,3;CL:0002539,8.02e-16,3;CL:0000514,8.02e-16,3;CL:0000680,1.29e-08,6;CL:0000187,1.29e-08,6;CL:0000056,1.29e-08,6;CL:0000222,1.41e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001135!1.86e-10!3;UBERON:0004237!1.86e-10!3;UBERON:0004695!1.86e-10!3;UBERON:0002111!1.86e-10!3;UBERON:0004178!1.86e-10!3;UBERON:0000947!6.10e-08!4;UBERON:0001637!6.10e-08!4;UBERON:0003509!6.10e-08!4;UBERON:0004573!6.10e-08!4;UBERON:0004571!6.10e-08!4;UBERON:0010191!6.10e-08!4;UBERON:0004572!6.10e-08!4;UBERON:0005409!8.43e-08!59|ontology_enrichment_uberon_v019_2=UBERON:0001135,8.02e-16,3;UBERON:0004237,8.02e-16,3;UBERON:0004695,8.02e-16,3;UBERON:0002111,8.02e-16,3;UBERON:0004178,8.02e-16,3;UBERON:0000947,3.12e-12,4;UBERON:0001637,3.12e-12,4;UBERON:0004573,3.12e-12,4;UBERON:0003509,3.12e-12,4;UBERON:0004571,3.12e-12,4;UBERON:0010191,3.12e-12,4;UBERON:0004572,3.12e-12,4;UBERON:0002108,4.02e-12,4;UBERON:0000055,4.56e-10,5;UBERON:0007500,4.56e-10,5;UBERON:0001981,4.56e-10,5;UBERON:0002049,4.56e-10,5;UBERON:0007798,4.56e-10,5;UBERON:0004537,4.56e-10,5;UBERON:0006965,4.56e-10,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,4.03802854755699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0,0.994782360205754,0,0,0.864552199498777,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,1.1659233465194,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr2:113589212..113589219,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=445 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:113589212..113589219,- | |||
|id=chr2:113589212..113589219,- | |||
|ontology_enrichment_celltype=CL:0000192!1.86e-10!3;CL:0000359!1.86e-10!3;CL:0002539!1.86e-10!3;CL:0000514!1.86e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,8.02e-16,3;CL:0000359,8.02e-16,3;CL:0002539,8.02e-16,3;CL:0000514,8.02e-16,3;CL:0000680,1.29e-08,6;CL:0000187,1.29e-08,6;CL:0000056,1.29e-08,6;CL:0000222,1.41e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001135!1.86e-10!3;UBERON:0004237!1.86e-10!3;UBERON:0004695!1.86e-10!3;UBERON:0002111!1.86e-10!3;UBERON:0004178!1.86e-10!3;UBERON:0000947!6.10e-08!4;UBERON:0001637!6.10e-08!4;UBERON:0003509!6.10e-08!4;UBERON:0004573!6.10e-08!4;UBERON:0004571!6.10e-08!4;UBERON:0010191!6.10e-08!4;UBERON:0004572!6.10e-08!4;UBERON:0005409!8.43e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,8.02e-16,3;UBERON:0004237,8.02e-16,3;UBERON:0004695,8.02e-16,3;UBERON:0002111,8.02e-16,3;UBERON:0004178,8.02e-16,3;UBERON:0000947,3.12e-12,4;UBERON:0001637,3.12e-12,4;UBERON:0004573,3.12e-12,4;UBERON:0003509,3.12e-12,4;UBERON:0004571,3.12e-12,4;UBERON:0010191,3.12e-12,4;UBERON:0004572,3.12e-12,4;UBERON:0002108,4.02e-12,4;UBERON:0000055,4.56e-10,5;UBERON:0007500,4.56e-10,5;UBERON:0001981,4.56e-10,5;UBERON:0002049,4.56e-10,5;UBERON:0007798,4.56e-10,5;UBERON:0004537,4.56e-10,5;UBERON:0006965,4.56e-10,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,4.03802854755699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0,0.994782360205754,0,0,0.864552199498777,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,1.1659233465194,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr2:113589212..113589219,- | |||
}} |
Revision as of 21:38, 13 September 2013
Short description: | p@chr2:113589212..113589219, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:113589212..113589219, - |
Coexpression cluster: | MCL_coexpression_mm9:445 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 8.02e-16 | 3 |
vascular associated smooth muscle cell | 8.02e-16 | 3 |
aortic smooth muscle cell | 8.02e-16 | 3 |
smooth muscle myoblast | 8.02e-16 | 3 |
muscle precursor cell | 1.29e-08 | 6 |
muscle cell | 1.29e-08 | 6 |
myoblast | 1.29e-08 | 6 |
mesodermal cell | 1.41e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 8.02e-16 | 3 |
blood vessel smooth muscle | 8.02e-16 | 3 |
arterial system smooth muscle | 8.02e-16 | 3 |
artery smooth muscle tissue | 8.02e-16 | 3 |
aorta smooth muscle tissue | 8.02e-16 | 3 |
aorta | 3.12e-12 | 4 |
artery | 3.12e-12 | 4 |
systemic artery | 3.12e-12 | 4 |
arterial blood vessel | 3.12e-12 | 4 |
systemic arterial system | 3.12e-12 | 4 |
aortic system | 3.12e-12 | 4 |
arterial system | 3.12e-12 | 4 |
small intestine | 4.02e-12 | 4 |
vessel | 4.56e-10 | 5 |
epithelial tube open at both ends | 4.56e-10 | 5 |
blood vessel | 4.56e-10 | 5 |
vasculature | 4.56e-10 | 5 |
vascular system | 4.56e-10 | 5 |
blood vasculature | 4.56e-10 | 5 |
vascular cord | 4.56e-10 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.