FFCP PHASE1:Hg19::chr7:115863000..115863015,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26136|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14620|TSSclassifier=S|UniProt=Q9UGI8|association_with_transcript=0bp_to_ENST00000485009,NM_152829_5end|coexpression_cluster_id=C48|description=CAGE_peak_8_at_TES_5end|id=chr7:115863000..115863015,+|ontology_enrichment_celltype=CL:0002620!1.63e-11!23|ontology_enrichment_celltype_v019=CL:0002601;1.37e-08;1!CL:0000222;3.05e-08;1|ontology_enrichment_celltype_v019_2=CL:0002601,1.37e-08,1|ontology_enrichment_development_v019=UBERON:0007297;1.94e-15;2!UBERON:0005754;6.50e-09;1!UBERON:0000358;1.23e-08;1!UBERON:0004874;1.23e-08;1!UBERON:0009143;1.77e-08;1!UBERON:0001045;3.05e-08;1!UBERON:0006603;1.20e-07;65|ontology_enrichment_disease=DOID:17!9.53e-09!5;DOID:450!9.53e-09!5;DOID:66!9.53e-09!5;DOID:423!9.53e-09!5;DOID:0080000!9.53e-09!5;DOID:11722!9.53e-09!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.10e-12!115;UBERON:0005156!5.49e-10!59;UBERON:0000990!5.49e-10!59;UBERON:0006947!6.86e-10!3;UBERON:0004054!6.86e-10!3;UBERON:0004175!7.09e-10!25;UBERON:0003101!4.42e-09!22;UBERON:0000079!4.42e-09!22;UBERON:0000059!7.73e-09!11;UBERON:0001046!1.81e-08!19;UBERON:0001155!1.04e-07!9;UBERON:0005904!1.73e-07!4;UBERON:0003133!2.00e-07!48;UBERON:0002097!6.82e-07!40;UBERON:0000162!7.95e-07!14;UBERON:0001353!7.95e-07!14;UBERON:0000163!7.95e-07!14;UBERON:0006866!7.95e-07!14;UBERON:0000164!7.95e-07!14;UBERON:0000931!7.95e-07!14|ontology_enrichment_uberon_v019=UBERON:0006947;1.46e-22;3!UBERON:0004054;1.46e-22;3!UBERON:0005904;4.48e-17;4!UBERON:0003135;2.17e-16;11!UBERON:0004175;2.56e-16;21!UBERON:0000059;9.40e-16;11!UBERON:0001155;1.37e-12;9!UBERON:0003101;1.93e-11;22!UBERON:0000079;1.93e-11;22!UBERON:0003133;4.80e-10;44!UBERON:0000160;1.44e-09;17!UBERON:0000998;6.50e-09;1!UBERON:0006868;6.50e-09;1!UBERON:0001000;7.01e-09;1!UBERON:0005352;7.01e-09;1!UBERON:0005795;8.14e-09;1!UBERON:0006834;8.78e-09;1!UBERON:0000996;1.10e-08;1!UBERON:0000989;1.23e-08;1!UBERON:0008811;1.23e-08;1!UBERON:0001154;3.05e-08;1!UBERON:0001301;3.05e-08;1!UBERON:0001153;3.05e-08;1!UBERON:0009854;3.05e-08;1!UBERON:0005156;1.75e-07;59!UBERON:0000990;1.75e-07;59!UBERON:0005409;1.90e-07;22!UBERON:0000058;4.01e-07;10!UBERON:0004921;4.95e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.36e-22,3;UBERON:0004054,1.36e-22,3;UBERON:0005904,4.25e-17,4;UBERON:0003135,2.10e-16,11;UBERON:0000059,6.24e-16,11;UBERON:0004175,1.39e-13,25;UBERON:0003133,1.57e-13,48;UBERON:0007023,3.09e-13,114;UBERON:0005156,4.94e-13,59;UBERON:0000990,4.94e-13,59;UBERON:0001155,9.61e-13,9;UBERON:0003101,1.89e-11,22;UBERON:0000079,1.89e-11,22;UBERON:0000160,1.13e-09,17;UBERON:0001046,1.99e-09,19;UBERON:0003064,6.22e-09,28;UBERON:0000998,6.50e-09,1;UBERON:0006868,6.50e-09,1;UBERON:0001000,7.01e-09,1;UBERON:0005352,7.01e-09,1;UBERON:0006834,8.78e-09,1;UBERON:0000996,1.10e-08,1;UBERON:0000989,1.27e-08,1;UBERON:0008811,1.27e-08,1;UBERON:0006258,1.27e-08,1;UBERON:0005876,1.27e-08,1;UBERON:0004874,1.27e-08,1;UBERON:0001154,2.64e-08,1;UBERON:0001153,2.64e-08,1;UBERON:0001045,2.64e-08,1;UBERON:0001301,2.84e-08,1|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,2.13557388818567,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0,0.920498986422993,0,0.710019185033229,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0,0.429680979473094,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,32.5523238601881,0,0,0,0,0,0,0,0,0,0,0,0,1.45802306691627,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,14.0818973061949,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,1.94606641907346,1.83309043480088,0,0,0,0,0,0.234264445725339,0,0,0,15.7833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,2.23074737923365,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.2201915215287,0,0,0,0,0,0,0,0,0,0,0,4.46590060550365,1.40696995487696,0.127762427639595,0,0,0,0,0.532214220975833,0,0,0,0,0,0,8.08478856360294,0,0,2.73947616152849,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,16.0887079072553,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0.771741581079447,0,0,35.0562100108085,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72803313585662,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,4.69281884806909,9.04586686953212,13.8344700627351,5.99181096766961,0.402547587182052,0|short_description=p8@TES}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=26136 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14620 | |||
|TSSclassifier=S | |||
|UniProt=Q9UGI8 | |||
|association_with_transcript=0bp_to_ENST00000485009,NM_152829_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_8_at_TES_5end | |||
|id=chr7:115863000..115863015,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.63e-11!23 | |||
|ontology_enrichment_celltype_v019=CL:0002601;1.37e-08;1!CL:0000222;3.05e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002601,1.37e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.94e-15;2!UBERON:0005754;6.50e-09;1!UBERON:0000358;1.23e-08;1!UBERON:0004874;1.23e-08;1!UBERON:0009143;1.77e-08;1!UBERON:0001045;3.05e-08;1!UBERON:0006603;1.20e-07;65 | |||
|ontology_enrichment_disease=DOID:17!9.53e-09!5;DOID:450!9.53e-09!5;DOID:66!9.53e-09!5;DOID:423!9.53e-09!5;DOID:0080000!9.53e-09!5;DOID:11722!9.53e-09!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-12!115;UBERON:0005156!5.49e-10!59;UBERON:0000990!5.49e-10!59;UBERON:0006947!6.86e-10!3;UBERON:0004054!6.86e-10!3;UBERON:0004175!7.09e-10!25;UBERON:0003101!4.42e-09!22;UBERON:0000079!4.42e-09!22;UBERON:0000059!7.73e-09!11;UBERON:0001046!1.81e-08!19;UBERON:0001155!1.04e-07!9;UBERON:0005904!1.73e-07!4;UBERON:0003133!2.00e-07!48;UBERON:0002097!6.82e-07!40;UBERON:0000162!7.95e-07!14;UBERON:0001353!7.95e-07!14;UBERON:0000163!7.95e-07!14;UBERON:0006866!7.95e-07!14;UBERON:0000164!7.95e-07!14;UBERON:0000931!7.95e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.46e-22;3!UBERON:0004054;1.46e-22;3!UBERON:0005904;4.48e-17;4!UBERON:0003135;2.17e-16;11!UBERON:0004175;2.56e-16;21!UBERON:0000059;9.40e-16;11!UBERON:0001155;1.37e-12;9!UBERON:0003101;1.93e-11;22!UBERON:0000079;1.93e-11;22!UBERON:0003133;4.80e-10;44!UBERON:0000160;1.44e-09;17!UBERON:0000998;6.50e-09;1!UBERON:0006868;6.50e-09;1!UBERON:0001000;7.01e-09;1!UBERON:0005352;7.01e-09;1!UBERON:0005795;8.14e-09;1!UBERON:0006834;8.78e-09;1!UBERON:0000996;1.10e-08;1!UBERON:0000989;1.23e-08;1!UBERON:0008811;1.23e-08;1!UBERON:0001154;3.05e-08;1!UBERON:0001301;3.05e-08;1!UBERON:0001153;3.05e-08;1!UBERON:0009854;3.05e-08;1!UBERON:0005156;1.75e-07;59!UBERON:0000990;1.75e-07;59!UBERON:0005409;1.90e-07;22!UBERON:0000058;4.01e-07;10!UBERON:0004921;4.95e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.36e-22,3;UBERON:0004054,1.36e-22,3;UBERON:0005904,4.25e-17,4;UBERON:0003135,2.10e-16,11;UBERON:0000059,6.24e-16,11;UBERON:0004175,1.39e-13,25;UBERON:0003133,1.57e-13,48;UBERON:0007023,3.09e-13,114;UBERON:0005156,4.94e-13,59;UBERON:0000990,4.94e-13,59;UBERON:0001155,9.61e-13,9;UBERON:0003101,1.89e-11,22;UBERON:0000079,1.89e-11,22;UBERON:0000160,1.13e-09,17;UBERON:0001046,1.99e-09,19;UBERON:0003064,6.22e-09,28;UBERON:0000998,6.50e-09,1;UBERON:0006868,6.50e-09,1;UBERON:0001000,7.01e-09,1;UBERON:0005352,7.01e-09,1;UBERON:0006834,8.78e-09,1;UBERON:0000996,1.10e-08,1;UBERON:0000989,1.27e-08,1;UBERON:0008811,1.27e-08,1;UBERON:0006258,1.27e-08,1;UBERON:0005876,1.27e-08,1;UBERON:0004874,1.27e-08,1;UBERON:0001154,2.64e-08,1;UBERON:0001153,2.64e-08,1;UBERON:0001045,2.64e-08,1;UBERON:0001301,2.84e-08,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,2.13557388818567,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0,0.920498986422993,0,0.710019185033229,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0,0.429680979473094,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,32.5523238601881,0,0,0,0,0,0,0,0,0,0,0,0,1.45802306691627,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,14.0818973061949,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,1.94606641907346,1.83309043480088,0,0,0,0,0,0.234264445725339,0,0,0,15.7833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,2.23074737923365,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.2201915215287,0,0,0,0,0,0,0,0,0,0,0,4.46590060550365,1.40696995487696,0.127762427639595,0,0,0,0,0.532214220975833,0,0,0,0,0,0,8.08478856360294,0,0,2.73947616152849,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,16.0887079072553,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0.771741581079447,0,0,35.0562100108085,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72803313585662,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,4.69281884806909,9.04586686953212,13.8344700627351,5.99181096766961,0.402547587182052,0 | |||
|short_description=p8@TES | |||
}} |
Revision as of 22:50, 13 September 2013
Short description: | p8@TES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_TES_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_ENST00000485009, NM_152829_5end |
EntrezGene: | TES |
HGNC: | 14620 |
UniProt: | Q9UGI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 1.37e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.36e-22 | 3 |
internal male genitalia | 1.36e-22 | 3 |
duct of male reproductive system | 4.25e-17 | 4 |
male reproductive organ | 2.10e-16 | 11 |
large intestine | 6.24e-16 | 11 |
internal genitalia | 1.39e-13 | 25 |
reproductive organ | 1.57e-13 | 48 |
adult organism | 3.09e-13 | 114 |
reproductive structure | 4.94e-13 | 59 |
reproductive system | 4.94e-13 | 59 |
colon | 9.61e-13 | 9 |
male organism | 1.89e-11 | 22 |
male reproductive system | 1.89e-11 | 22 |
intestine | 1.13e-09 | 17 |
hindgut | 1.99e-09 | 19 |
intermediate mesoderm | 6.22e-09 | 28 |
seminal vesicle | 6.50e-09 | 1 |
seminal fluid secreting gland | 6.50e-09 | 1 |
vas deferens | 7.01e-09 | 1 |
spermatic cord | 7.01e-09 | 1 |
uterus or analog | 8.78e-09 | 1 |
vagina | 1.10e-08 | 1 |
penis | 1.27e-08 | 1 |
intromittent organ | 1.27e-08 | 1 |
lateral plate mesenchyme | 1.27e-08 | 1 |
undifferentiated genital tubercle | 1.27e-08 | 1 |
somatopleure | 1.27e-08 | 1 |
vermiform appendix | 2.64e-08 | 1 |
caecum | 2.64e-08 | 1 |
midgut | 2.64e-08 | 1 |
epididymis | 2.84e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.