FFCP PHASE1:Hg19::chr7:134653144..134653160,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C320|description=CAGE_peak_at_chr7:134653144..134653160,+|id=chr7:134653144..134653160,+|ontology_enrichment_celltype=CL:0000055!5.16e-23!180;CL:0000057!7.63e-14!75;CL:0000680!6.56e-08!57;CL:0000056!6.56e-08!57;CL:0000355!6.56e-08!57;CL:0002620!1.70e-07!23;CL:0000187!2.48e-07!54;CL:0002334!9.05e-07!12|ontology_enrichment_celltype_v019=CL:0000134;2.76e-08;55!CL:0002620;4.70e-08;23!CL:0002334;2.03e-07;12!CL:0000048;9.09e-07;58!CL:0000723;9.25e-07;61|ontology_enrichment_celltype_v019_2=CL:0000057,1.86e-15,76;CL:0002620,8.68e-08,23;CL:0002334,1.37e-07,12;CL:0000192,2.05e-07,43;CL:0000514,2.05e-07,43;CL:0000048,2.35e-07,427;CL:0000723,2.36e-07,433;CL:0000680,3.61e-07,58;CL:0000056,3.61e-07,58;CL:0000355,3.61e-07,58;CL:0000187,9.27e-07,55|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;1.62e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,1.48e-07,14|ontology_enrichment_uberon=UBERON:0005256!1.26e-09!143;UBERON:0000914!1.42e-09!83;UBERON:0002329!1.42e-09!83;UBERON:0003077!1.42e-09!83;UBERON:0003059!1.42e-09!83;UBERON:0007282!1.42e-09!83;UBERON:0009618!1.42e-09!83;UBERON:0007285!1.42e-09!83;UBERON:0000475!4.47e-09!365;UBERON:0003102!4.48e-09!95;UBERON:0002385!3.83e-08!63;UBERON:0001015!3.83e-08!63;UBERON:0000383!3.83e-08!63;UBERON:0000468!4.06e-08!659;UBERON:0004290!7.47e-08!70;UBERON:0000486!1.11e-07!82;UBERON:0001134!1.17e-07!61;UBERON:0002036!1.17e-07!61;UBERON:0003082!1.17e-07!61;UBERON:0002100!1.38e-07!216;UBERON:0002199!3.08e-07!45;UBERON:0002416!3.08e-07!45|ontology_enrichment_uberon_v019=UBERON:0003688;1.78e-07;6!UBERON:0002358;1.78e-07;6!UBERON:0003684;1.78e-07;6!UBERON:0001178;1.78e-07;6!UBERON:0001135;2.90e-07;15!UBERON:0002384;3.66e-07;198!UBERON:0004457;4.42e-07;9!UBERON:0000042;4.42e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.77e-08,46;UBERON:0002416,2.77e-08,46;UBERON:0003102,3.87e-08,99;UBERON:0005256,1.16e-07,122;UBERON:0002097,1.68e-07,41;UBERON:0003688,1.73e-07,6;UBERON:0002358,1.73e-07,6;UBERON:0003684,1.73e-07,6;UBERON:0001178,1.73e-07,6;UBERON:0001135,2.61e-07,15;UBERON:0002385,6.46e-07,64;UBERON:0001015,6.46e-07,64;UBERON:0000383,6.46e-07,64|phase1_expression=9.08391896352783,14.5588356245869,6.90676580070259,33.024188456533,6.70441641640932,20.9361245784089,7.59899634504932,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0.495065411840187,0.662794751455832,6.05092631806598,6.62963980826375,7.30310090387373,8.78279037822912,0.123121058076788,0.408001382488506,0,2.28988789704845,1.77936752594749,2.13422487311165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,2.89151321907653,2.00535164254356,4.05570253090306,0,2.43317435151318,1.03988298880475,3.76939975686359,0.966182642624386,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.419499436209906,1.10047216776027,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,1.46437234528902,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,1.3082821564276,11.4303548889923,3.41902381494365,2.91300197789081,2.29469296599051,1.77334191099179,2.80338800071154,0,6.41335625884616,0.311211035399766,0.942974704487816,0.817309515567294,0,6.33793516927999,0,0.936480230490962,0,1.19558944441441,0.469737994575059,0.161872944368132,0.561803226808994,0.61246251376468,0.737005903870608,0.516628905878827,1.18800285728205,9.89067717114228,0,0.718618141816238,1.0100166837244,0.500474079487857,0,2.19488810440419,11.9530240361618,5.25833206173089,1.47461838108027,7.35497506324334,5.55249210928275,4.87443372666992,3.30100205692843,1.23663035086127,9.79034052173391,5.95573940261087,2.02531598689519,2.14361411354637,4.54380793639406,3.58994604704967,2.90962902273861,8.16522062788213,3.32481924151213,1.18692414617341,0.773043412653187,2.72746120590835,0,0.365921118388786,0,0.116193942869518,0.621966330092223,0.504641701751257,0.36497735907583,0,19.2972281457866,1.38134921352481,3.25057549622385,2.88751792667834,0.828147600278907,0.674338760312407,1.92808823906786,0.882351781859152,0.435758888184812,0.237270619111097,2.56179485504312,0,1.53898862778556,0,0,0,1.47008711385542,0,1.96565443335525,1.77236972004421,0,0.368965315629341,0.857839051492628,1.42675371031213,0,1.20634766893957,0.648119116109707,0,0,4.3299402607582,0.927443239800615,0.587043471179108,0.288732895522148,0,2.47330397904978,0,0,0,0,0,0.93733833986777,3.02367830757947,0.850650583454319,0.895585227028483,0.581267877027924,1.91691339582606,0,0,0.207328115540772,0,0,0.507983154337352,0.381988425558278,1.17217447210047,1.7107244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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C320 | |||
|description=CAGE_peak_at_chr7:134653144..134653160,+ | |||
|id=chr7:134653144..134653160,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.16e-23!180;CL:0000057!7.63e-14!75;CL:0000680!6.56e-08!57;CL:0000056!6.56e-08!57;CL:0000355!6.56e-08!57;CL:0002620!1.70e-07!23;CL:0000187!2.48e-07!54;CL:0002334!9.05e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000134;2.76e-08;55!CL:0002620;4.70e-08;23!CL:0002334;2.03e-07;12!CL:0000048;9.09e-07;58!CL:0000723;9.25e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.86e-15,76;CL:0002620,8.68e-08,23;CL:0002334,1.37e-07,12;CL:0000192,2.05e-07,43;CL:0000514,2.05e-07,43;CL:0000048,2.35e-07,427;CL:0000723,2.36e-07,433;CL:0000680,3.61e-07,58;CL:0000056,3.61e-07,58;CL:0000355,3.61e-07,58;CL:0000187,9.27e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.62e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.48e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.26e-09!143;UBERON:0000914!1.42e-09!83;UBERON:0002329!1.42e-09!83;UBERON:0003077!1.42e-09!83;UBERON:0003059!1.42e-09!83;UBERON:0007282!1.42e-09!83;UBERON:0009618!1.42e-09!83;UBERON:0007285!1.42e-09!83;UBERON:0000475!4.47e-09!365;UBERON:0003102!4.48e-09!95;UBERON:0002385!3.83e-08!63;UBERON:0001015!3.83e-08!63;UBERON:0000383!3.83e-08!63;UBERON:0000468!4.06e-08!659;UBERON:0004290!7.47e-08!70;UBERON:0000486!1.11e-07!82;UBERON:0001134!1.17e-07!61;UBERON:0002036!1.17e-07!61;UBERON:0003082!1.17e-07!61;UBERON:0002100!1.38e-07!216;UBERON:0002199!3.08e-07!45;UBERON:0002416!3.08e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.78e-07;6!UBERON:0002358;1.78e-07;6!UBERON:0003684;1.78e-07;6!UBERON:0001178;1.78e-07;6!UBERON:0001135;2.90e-07;15!UBERON:0002384;3.66e-07;198!UBERON:0004457;4.42e-07;9!UBERON:0000042;4.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.77e-08,46;UBERON:0002416,2.77e-08,46;UBERON:0003102,3.87e-08,99;UBERON:0005256,1.16e-07,122;UBERON:0002097,1.68e-07,41;UBERON:0003688,1.73e-07,6;UBERON:0002358,1.73e-07,6;UBERON:0003684,1.73e-07,6;UBERON:0001178,1.73e-07,6;UBERON:0001135,2.61e-07,15;UBERON:0002385,6.46e-07,64;UBERON:0001015,6.46e-07,64;UBERON:0000383,6.46e-07,64 | |||
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| |||
|short_description=p@chr7:134653144..134653160,+ | |||
}} |
Revision as of 23:22, 13 September 2013
Short description: | p@chr7:134653144..134653160, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:134653144..134653160, + |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.86e-15 | 76 |
skin fibroblast | 8.68e-08 | 23 |
preadipocyte | 1.37e-07 | 12 |
smooth muscle cell | 2.05e-07 | 43 |
smooth muscle myoblast | 2.05e-07 | 43 |
multi fate stem cell | 2.35e-07 | 427 |
somatic stem cell | 2.36e-07 | 433 |
muscle precursor cell | 3.61e-07 | 58 |
myoblast | 3.61e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.61e-07 | 58 |
muscle cell | 9.27e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
integument | 2.77e-08 | 46 |
integumental system | 2.77e-08 | 46 |
surface structure | 3.87e-08 | 99 |
trunk mesenchyme | 1.16e-07 | 122 |
skin of body | 1.68e-07 | 41 |
omentum | 1.73e-07 | 6 |
peritoneum | 1.73e-07 | 6 |
abdominal cavity | 1.73e-07 | 6 |
visceral peritoneum | 1.73e-07 | 6 |
smooth muscle tissue | 2.61e-07 | 15 |
muscle tissue | 6.46e-07 | 64 |
musculature | 6.46e-07 | 64 |
musculature of body | 6.46e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.48e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.