FFCP PHASE1:Hg19::chr7:139762438..139762447,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64761|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21919|TSSclassifier=S|UniProt=|association_with_transcript=-87bp_to_ENST00000467638_5end|coexpression_cluster_id=C166|description=CAGE_peak_4_at_PARP12_5end|id=chr7:139762438..139762447,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000840;7.77e-28;5!CL:0000990;8.16e-19;8!CL:0000451;1.60e-15;10!CL:0000235;3.55e-13;6!CL:0002593;2.85e-10;2|ontology_enrichment_celltype_v019_2=CL:0000840,7.10e-28,5;CL:0001029,7.10e-28,5;CL:0000990,7.68e-19,8;CL:0000451,1.52e-15,10;CL:0000235,3.55e-13,6;CL:0002593,3.58e-10,2;CL:0002194,1.13e-07,59;CL:0000576,1.13e-07,59;CL:0000040,1.13e-07,59;CL:0000559,1.13e-07,59;CL:0002009,1.99e-07,61;CL:0000839,7.16e-07,66;CL:0000557,9.04e-07,67|ontology_enrichment_development_v019=UBERON:0000358;1.71e-19;1!UBERON:0004161;1.90e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001905;2.85e-10;2!UBERON:0002757;2.85e-10;2!UBERON:0010134;2.85e-10;2!UBERON:0005408;2.85e-10;2!UBERON:0002456;2.85e-10;2!UBERON:0001899;2.85e-10;2|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.27e-10,2;UBERON:0002757,3.27e-10,2;UBERON:0010134,3.27e-10,2;UBERON:0005408,3.27e-10,2;UBERON:0001899,3.27e-10,2;UBERON:0002456,3.58e-10,2|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,0.130979075497713,0,0,1.29818957461873,4.35324343248168,3.85578085504709,0,0,0,0,0,0,0,0.838998872419812,0,0,0.258416759169329,0.35576626268671,0,0,0,0.732186172644509,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0.246217006087397,4.21207677250628,2.67536092119711,0,0.16798212819886,0.283550194484773,0,0,0.383382679165211,0.492663237895943,0.528290604079356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.111443384277478,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0.141353071433941,0,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0.225980740780532,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0.146552233678082,1.32506888912221,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0.573409195690071,0,0.0620964029413835,0.138348634936231,0,0.151649117541648,0.856396000634902,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.53168342911599,0.521745061811734,0,0,0.406870733204662,0,0,0,0.796191777397232,0,0,0,0,0,0,0,0.22670592551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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64761 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21919 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-87bp_to_ENST00000467638_5end | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_4_at_PARP12_5end | |||
|id=chr7:139762438..139762447,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000840;7.77e-28;5!CL:0000990;8.16e-19;8!CL:0000451;1.60e-15;10!CL:0000235;3.55e-13;6!CL:0002593;2.85e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,7.10e-28,5;CL:0001029,7.10e-28,5;CL:0000990,7.68e-19,8;CL:0000451,1.52e-15,10;CL:0000235,3.55e-13,6;CL:0002593,3.58e-10,2;CL:0002194,1.13e-07,59;CL:0000576,1.13e-07,59;CL:0000040,1.13e-07,59;CL:0000559,1.13e-07,59;CL:0002009,1.99e-07,61;CL:0000839,7.16e-07,66;CL:0000557,9.04e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.71e-19;1!UBERON:0004161;1.90e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.85e-10;2!UBERON:0002757;2.85e-10;2!UBERON:0010134;2.85e-10;2!UBERON:0005408;2.85e-10;2!UBERON:0002456;2.85e-10;2!UBERON:0001899;2.85e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.27e-10,2;UBERON:0002757,3.27e-10,2;UBERON:0010134,3.27e-10,2;UBERON:0005408,3.27e-10,2;UBERON:0001899,3.27e-10,2;UBERON:0002456,3.58e-10,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,0.130979075497713,0,0,1.29818957461873,4.35324343248168,3.85578085504709,0,0,0,0,0,0,0,0.838998872419812,0,0,0.258416759169329,0.35576626268671,0,0,0,0.732186172644509,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0.246217006087397,4.21207677250628,2.67536092119711,0,0.16798212819886,0.283550194484773,0,0,0.383382679165211,0.492663237895943,0.528290604079356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.111443384277478,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0.141353071433941,0,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0.225980740780532,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0.146552233678082,1.32506888912221,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0.573409195690071,0,0.0620964029413835,0.138348634936231,0,0.151649117541648,0.856396000634902,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.53168342911599,0.521745061811734,0,0,0.406870733204662,0,0,0,0.796191777397232,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0,0,0.337884881306145,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0,0,0.196295437002051,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,1.07140367175657,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,1.41095188908457,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0.160482733378337,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0.179650404213174,2.34640942403454,0.244482888365733,0,0.665756774185513,0,0 | |||
|short_description=p4@PARP12 | |||
}} |
Revision as of 23:32, 13 September 2013
Short description: | p4@PARP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PARP12_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -87bp_to_ENST00000467638_5end |
EntrezGene: | PARP12 |
HGNC: | 21919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 7.10e-28 | 5 |
common dendritic progenitor | 7.10e-28 | 5 |
conventional dendritic cell | 7.68e-19 | 8 |
dendritic cell | 1.52e-15 | 10 |
macrophage | 3.55e-13 | 6 |
smooth muscle cell of the internal thoracic artery | 3.58e-10 | 2 |
monopoietic cell | 1.13e-07 | 59 |
monocyte | 1.13e-07 | 59 |
monoblast | 1.13e-07 | 59 |
promonocyte | 1.13e-07 | 59 |
macrophage dendritic cell progenitor | 1.99e-07 | 61 |
myeloid lineage restricted progenitor cell | 7.16e-07 | 66 |
granulocyte monocyte progenitor cell | 9.04e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.27e-10 | 2 |
regional part of epithalamus | 3.27e-10 | 2 |
secretory circumventricular organ | 3.27e-10 | 2 |
circumventricular organ | 3.27e-10 | 2 |
epithalamus | 3.27e-10 | 2 |
internal thoracic artery | 3.58e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.