FFCP PHASE1:Hg19::chr7:4008614..4008625,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C88|description=CAGE_peak_at_chr7:4008614..4008625,-|id=chr7:4008614..4008625,-|ontology_enrichment_celltype=CL:0000148!1.76e-19!10;CL:0000541!1.76e-19!10;CL:0002567!5.30e-17!3;CL:0000147!5.35e-14!14;CL:0002566!1.61e-13!1;CL:0000946!7.68e-13!1;CL:0000786!7.68e-13!1;CL:0000980!7.68e-13!1;CL:0000710!7.24e-10!20;CL:0000075!2.36e-07!27;CL:0000785!4.69e-07!2;CL:0000955!4.69e-07!2;CL:0000818!4.69e-07!2;CL:0000954!4.69e-07!2;CL:0000816!4.69e-07!2|ontology_enrichment_celltype_v019=CL:0000148;6.89e-53;10!CL:0002567;1.37e-44;3!CL:0000147;4.95e-38;14!CL:0002566;1.84e-34;1!CL:0000710;7.25e-27;20!CL:0000075;4.30e-20;27!CL:0002077;2.06e-14;34|ontology_enrichment_celltype_v019_2=CL:0000148,6.89e-53,10;CL:0000541,6.89e-53,10;CL:0002567,1.22e-44,3;CL:0000147,4.95e-38,14;CL:0002566,1.84e-34,1;CL:0000710,7.25e-27,20;CL:0000075,4.30e-20,27;CL:0002077,4.26e-16,34;CL:0000333,7.37e-13,41;CL:0000133,3.14e-09,59;CL:0000221,1.07e-07,72|ontology_enrichment_development_v019=UBERON:0003056;2.45e-12;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!1.00e-16!3;UBERON:0007029!4.23e-13!1;UBERON:0003076!1.26e-12!15;UBERON:0003057!1.26e-12!15;UBERON:0002370!1.39e-12!4;UBERON:0005058!1.39e-12!4;UBERON:0009113!1.39e-12!4;UBERON:0003295!1.39e-12!4;UBERON:0005562!1.39e-12!4;UBERON:0005174!2.04e-10!5;UBERON:0001137!2.04e-10!5;UBERON:0003351!1.08e-08!6;UBERON:0004177!1.43e-07!7|ontology_enrichment_uberon_v019=UBERON:0000966;6.34e-08;5!UBERON:0005388;6.34e-08;5!UBERON:0001802;6.34e-08;5!UBERON:0000970;1.33e-07;20!UBERON:0002104;2.77e-07;21!UBERON:0000020;9.95e-07;23|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.77e-07,21;UBERON:0002104,2.77e-07,21;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.1626018100002,1.90994212779139,37.509583107215,0,1.54241239054985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71176888936639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,2.93053831124291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.434523000071005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:4008614..4008625,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr7:4008614..4008625,- | |||
|id=chr7:4008614..4008625,- | |||
|ontology_enrichment_celltype=CL:0000148!1.76e-19!10;CL:0000541!1.76e-19!10;CL:0002567!5.30e-17!3;CL:0000147!5.35e-14!14;CL:0002566!1.61e-13!1;CL:0000946!7.68e-13!1;CL:0000786!7.68e-13!1;CL:0000980!7.68e-13!1;CL:0000710!7.24e-10!20;CL:0000075!2.36e-07!27;CL:0000785!4.69e-07!2;CL:0000955!4.69e-07!2;CL:0000818!4.69e-07!2;CL:0000954!4.69e-07!2;CL:0000816!4.69e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000148;6.89e-53;10!CL:0002567;1.37e-44;3!CL:0000147;4.95e-38;14!CL:0002566;1.84e-34;1!CL:0000710;7.25e-27;20!CL:0000075;4.30e-20;27!CL:0002077;2.06e-14;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.89e-53,10;CL:0000541,6.89e-53,10;CL:0002567,1.22e-44,3;CL:0000147,4.95e-38,14;CL:0002566,1.84e-34,1;CL:0000710,7.25e-27,20;CL:0000075,4.30e-20,27;CL:0002077,4.26e-16,34;CL:0000333,7.37e-13,41;CL:0000133,3.14e-09,59;CL:0000221,1.07e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.45e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!1.00e-16!3;UBERON:0007029!4.23e-13!1;UBERON:0003076!1.26e-12!15;UBERON:0003057!1.26e-12!15;UBERON:0002370!1.39e-12!4;UBERON:0005058!1.39e-12!4;UBERON:0009113!1.39e-12!4;UBERON:0003295!1.39e-12!4;UBERON:0005562!1.39e-12!4;UBERON:0005174!2.04e-10!5;UBERON:0001137!2.04e-10!5;UBERON:0003351!1.08e-08!6;UBERON:0004177!1.43e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;6.34e-08;5!UBERON:0005388;6.34e-08;5!UBERON:0001802;6.34e-08;5!UBERON:0000970;1.33e-07;20!UBERON:0002104;2.77e-07;21!UBERON:0000020;9.95e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.77e-07,21;UBERON:0002104,2.77e-07,21;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.1626018100002,1.90994212779139,37.509583107215,0,1.54241239054985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71176888936639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,2.93053831124291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.434523000071005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:4008614..4008625,- | |||
}} |
Revision as of 01:12, 14 September 2013
Short description: | p@chr7:4008614..4008625, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:4008614..4008625, - |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.89e-53 | 10 |
melanoblast | 6.89e-53 | 10 |
light melanocyte | 1.22e-44 | 3 |
pigment cell | 4.95e-38 | 14 |
dark melanocyte | 1.84e-34 | 1 |
neurecto-epithelial cell | 7.25e-27 | 20 |
columnar/cuboidal epithelial cell | 4.30e-20 | 27 |
ecto-epithelial cell | 4.26e-16 | 34 |
migratory neural crest cell | 7.37e-13 | 41 |
neurectodermal cell | 3.14e-09 | 59 |
ectodermal cell | 1.07e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
eye | 2.77e-07 | 21 |
visual system | 2.77e-07 | 21 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.