FFCP PHASE1:Mm9::chr3:27455075..27455090,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:27455075..27455090,-|id=chr3:27455075..27455090,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,2.95e-13,7;CL:0000680,2.93e-11,6;CL:0000187,2.93e-11,6;CL:0000056,2.93e-11,6;CL:0002494,1.81e-09,3;CL:0000737,1.81e-09,3;CL:0000746,1.81e-09,3;CL:0000513,1.81e-09,3;CL:0000355,2.27e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.52e-08,3;UBERON:0000478,2.52e-08,3;UBERON:0000158,2.52e-08,3;UBERON:0000055,3.43e-08,5;UBERON:0007500,3.43e-08,5;UBERON:0001981,3.43e-08,5;UBERON:0002049,3.43e-08,5;UBERON:0007798,3.43e-08,5;UBERON:0004537,3.43e-08,5;UBERON:0006965,3.43e-08,5;UBERON:0001134,2.27e-07,9;UBERON:0002036,2.27e-07,9;UBERON:0002385,2.27e-07,9;UBERON:0000486,2.27e-07,9;UBERON:0007503,2.27e-07,9;UBERON:0001015,2.27e-07,9;UBERON:0002329,2.27e-07,9;UBERON:0003082,2.27e-07,9;UBERON:0003059,2.27e-07,9;UBERON:0007282,2.27e-07,9;UBERON:0004290,2.27e-07,9;UBERON:0009618,2.27e-07,9|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0.159544317990673,0,0,0,0.202475267389826,0,0.157731082679119,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,1.38486499773135,0.811015449756117,1.10128051297009,0,0.218025156380447,0.219686182734472,0.58328969722285,0.55994568650145,1.43752564364972,0,0,0,3.8588915405392,3.43840127926508,4.64104883049698,0.202316460859598,0,0,1.0165335962074,0,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,0,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0.122490799214954,0.383381884072945,0,2.20231761998777,0.255374676170375,0.153606533256243,0.395658863190582,0.548925861614458,0.52091337055676,0.837548997004143,0,0.15279824777681,1.17851434189467,0.284743361598206,0,0.454357159999104,0.226714680320357,1.15945795480671,0.860423876981386,0.679971333707751,1.61910957491345,2.59910566979068,0.448026887097336,0.280888840263504,0.340860645156116,0,0,0.281686839553361,1.28326477414318,0,0,0.865964164044856,1.01343946190039,0.505524445014783,0.22836775943812,0.258937883647172,0.148442139064825,0.346970653532272,0.913396434936424,0.230615497256059,0.60289056221049,0.470354828542819,0.376999773989026,1.48316980640624,1.59059292611903,0,0.323533699894818,0.441683036920787,0,0,0,0,0,0.359445373517761,0.599902730993408,0.381210681219194,0,0.457500602818626,0.251308704225729,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.497627882440372,0.505445516867349,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0,0.408218994907967,0,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.834141747676794,1.0447564995665,0.61734640922383,0.398068533636986,0,0.51469581422943,0,0.414251545071004,0.938104239924385,0.36012412292203,0,0.196764231747404,0.617068451549513,0.697601834251224,0.268273401399619,0.467061369468678,0.16455984991348,0,0.0810688095458557,0.438599962275997,0.439100230582101,0.134206418760372,0,0.205809224758569,0,1.05780226665418,0.213288250535234,0,0.257734922644187,0.403367049246685,0.667134131534611,0.380451252225118,0.474529061544512,0,0.502670417600539,0.198956472041151,0,0,0,0.398282546508734,0.569003702859245,0.456994050438915,0,0.814605311381257,0.775809948670503,0.561086559122548,0.505892296994058,0.295220295959204,0.470996183524124,0.370191491765402,0,0.667380422864376,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0,1.15078454980324,0,0.549122826376163,7.18841032636773,0.372140947668503,0.624075346229121,0.252578877947112,0.358794827043824,0,0.369506380333209,0.189491411770485,0.488894929326078,0.339490171550376,0.469380496577004,0.837531287209079,1.19021820443007,0.390267295715598,0.788175720530955,0.664394068946325,0.637819074629948,0.327726629431476,0.172684981865896,0.433947175744535,1.50791283939272,0.54390568381871,1.47529281905711,1.10374698521893,0,0.117211686592203,0.327869890753351,0,0.94652465824877,0,0.215423397732799,0,0.445597348164788,0,0,0.876767573733936,0.395287777946524,0,1.13552068166615,0.35613120733451,0.162886959353576,0.494910368917606,2.65490276679926,0.728341908464944,0,0.377210159511796,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.258717367565509,1.07168517515796,0.886701168211368,0.178368817602071,0.493647061806363,0.304464949114599,1.17335854031855,1.48282449604674,0.441056796109924,0.65954501176592,0.645857706783622,0.0603129249281559,0.238744688006273,0.164140899745061,0.291480836629851,0.370850604021019,0,0,0.370389054739423,0.188368457004691,0.27338845544205,0,0,0.139951452323658,0,0.954670618015114,0.316335993581135,0.406638934253697,0.324016022465404,0.418176592028937,0.218362563746178,0.404593039154462,0.165306911450672,0.26175594198403,0.388844919875379,0.621339313086926,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:27455075..27455090,- | |||
|id=chr3:27455075..27455090,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.95e-13,7;CL:0000680,2.93e-11,6;CL:0000187,2.93e-11,6;CL:0000056,2.93e-11,6;CL:0002494,1.81e-09,3;CL:0000737,1.81e-09,3;CL:0000746,1.81e-09,3;CL:0000513,1.81e-09,3;CL:0000355,2.27e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.52e-08,3;UBERON:0000478,2.52e-08,3;UBERON:0000158,2.52e-08,3;UBERON:0000055,3.43e-08,5;UBERON:0007500,3.43e-08,5;UBERON:0001981,3.43e-08,5;UBERON:0002049,3.43e-08,5;UBERON:0007798,3.43e-08,5;UBERON:0004537,3.43e-08,5;UBERON:0006965,3.43e-08,5;UBERON:0001134,2.27e-07,9;UBERON:0002036,2.27e-07,9;UBERON:0002385,2.27e-07,9;UBERON:0000486,2.27e-07,9;UBERON:0007503,2.27e-07,9;UBERON:0001015,2.27e-07,9;UBERON:0002329,2.27e-07,9;UBERON:0003082,2.27e-07,9;UBERON:0003059,2.27e-07,9;UBERON:0007282,2.27e-07,9;UBERON:0004290,2.27e-07,9;UBERON:0009618,2.27e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0.159544317990673,0,0,0,0.202475267389826,0,0.157731082679119,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,1.38486499773135,0.811015449756117,1.10128051297009,0,0.218025156380447,0.219686182734472,0.58328969722285,0.55994568650145,1.43752564364972,0,0,0,3.8588915405392,3.43840127926508,4.64104883049698,0.202316460859598,0,0,1.0165335962074,0,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,0,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0.122490799214954,0.383381884072945,0,2.20231761998777,0.255374676170375,0.153606533256243,0.395658863190582,0.548925861614458,0.52091337055676,0.837548997004143,0,0.15279824777681,1.17851434189467,0.284743361598206,0,0.454357159999104,0.226714680320357,1.15945795480671,0.860423876981386,0.679971333707751,1.61910957491345,2.59910566979068,0.448026887097336,0.280888840263504,0.340860645156116,0,0,0.281686839553361,1.28326477414318,0,0,0.865964164044856,1.01343946190039,0.505524445014783,0.22836775943812,0.258937883647172,0.148442139064825,0.346970653532272,0.913396434936424,0.230615497256059,0.60289056221049,0.470354828542819,0.376999773989026,1.48316980640624,1.59059292611903,0,0.323533699894818,0.441683036920787,0,0,0,0,0,0.359445373517761,0.599902730993408,0.381210681219194,0,0.457500602818626,0.251308704225729,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.497627882440372,0.505445516867349,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0,0.408218994907967,0,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.834141747676794,1.0447564995665,0.61734640922383,0.398068533636986,0,0.51469581422943,0,0.414251545071004,0.938104239924385,0.36012412292203,0,0.196764231747404,0.617068451549513,0.697601834251224,0.268273401399619,0.467061369468678,0.16455984991348,0,0.0810688095458557,0.438599962275997,0.439100230582101,0.134206418760372,0,0.205809224758569,0,1.05780226665418,0.213288250535234,0,0.257734922644187,0.403367049246685,0.667134131534611,0.380451252225118,0.474529061544512,0,0.502670417600539,0.198956472041151,0,0,0,0.398282546508734,0.569003702859245,0.456994050438915,0,0.814605311381257,0.775809948670503,0.561086559122548,0.505892296994058,0.295220295959204,0.470996183524124,0.370191491765402,0,0.667380422864376,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0,1.15078454980324,0,0.549122826376163,7.18841032636773,0.372140947668503,0.624075346229121,0.252578877947112,0.358794827043824,0,0.369506380333209,0.189491411770485,0.488894929326078,0.339490171550376,0.469380496577004,0.837531287209079,1.19021820443007,0.390267295715598,0.788175720530955,0.664394068946325,0.637819074629948,0.327726629431476,0.172684981865896,0.433947175744535,1.50791283939272,0.54390568381871,1.47529281905711,1.10374698521893,0,0.117211686592203,0.327869890753351,0,0.94652465824877,0,0.215423397732799,0,0.445597348164788,0,0,0.876767573733936,0.395287777946524,0,1.13552068166615,0.35613120733451,0.162886959353576,0.494910368917606,2.65490276679926,0.728341908464944,0,0.377210159511796,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.258717367565509,1.07168517515796,0.886701168211368,0.178368817602071,0.493647061806363,0.304464949114599,1.17335854031855,1.48282449604674,0.441056796109924,0.65954501176592,0.645857706783622,0.0603129249281559,0.238744688006273,0.164140899745061,0.291480836629851,0.370850604021019,0,0,0.370389054739423,0.188368457004691,0.27338845544205,0,0,0.139951452323658,0,0.954670618015114,0.316335993581135,0.406638934253697,0.324016022465404,0.418176592028937,0.218362563746178,0.404593039154462,0.165306911450672,0.26175594198403,0.388844919875379,0.621339313086926,0,0.448549638131936,0.165458490457098,0.388902376688095,0.129159823477731,0.844780627453891,0.352071715937262,0.39061315453185,0.314578033277133,0.241584120826006,0.288030006257865,0,0.405450430580328,0,0,0.358053391334963,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0.233753804363138,1.36038230169127,0.443971906748129,0.448569283047378,1.17519231454855,0.19318959403219,0.93841237725591,0.549454872801795,0,0,0,0,0,0.515559547031063,0,0,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0,0,0.972426868273176,0,0,0.222246727801615,0,0.320919209591815,1.26348605881899,0.50695859978048,0.188626341386076,0.468207537349412,0.640251524048693,0.402048282689293,0,0.231768651889711,0,0,0.735994600671987,0,0.177475806159338,0.476872379894642,0.726732083161643,0.470546902076653,0.169229215783353,0,0,1.22223702461276,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0,1.35034627686799,0.249810577937946,0.233931608445408,1.50409737833809,1.53030665655075,0,0.463735671240843 | |||
|short_description=p@chr3:27455075..27455090,- | |||
}} |
Revision as of 02:02, 14 September 2013
Short description: | p@chr3:27455075..27455090, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:27455075..27455090, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.95e-13 | 7 |
muscle precursor cell | 2.93e-11 | 6 |
muscle cell | 2.93e-11 | 6 |
myoblast | 2.93e-11 | 6 |
cardiocyte | 1.81e-09 | 3 |
striated muscle cell | 1.81e-09 | 3 |
cardiac muscle cell | 1.81e-09 | 3 |
cardiac muscle myoblast | 1.81e-09 | 3 |
multi-potent skeletal muscle stem cell | 2.27e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.52e-08 | 3 |
extraembryonic structure | 2.52e-08 | 3 |
membranous layer | 2.52e-08 | 3 |
vessel | 3.43e-08 | 5 |
epithelial tube open at both ends | 3.43e-08 | 5 |
blood vessel | 3.43e-08 | 5 |
vasculature | 3.43e-08 | 5 |
vascular system | 3.43e-08 | 5 |
blood vasculature | 3.43e-08 | 5 |
vascular cord | 3.43e-08 | 5 |
skeletal muscle tissue | 2.27e-07 | 9 |
striated muscle tissue | 2.27e-07 | 9 |
muscle tissue | 2.27e-07 | 9 |
multilaminar epithelium | 2.27e-07 | 9 |
epithelial vesicle | 2.27e-07 | 9 |
musculature | 2.27e-07 | 9 |
somite | 2.27e-07 | 9 |
myotome | 2.27e-07 | 9 |
presomitic mesoderm | 2.27e-07 | 9 |
presumptive segmental plate | 2.27e-07 | 9 |
dermomyotome | 2.27e-07 | 9 |
trunk paraxial mesoderm | 2.27e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.