FFCP PHASE1:Mm9::chr3:86352399..86352406,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23937|HGNC=|MCL_coexpression_id=673|UniProt=Q8BPP1,O70299|association_with_transcript=-194bp_to_ENSMUST00000077524,NM_011839,uc008prj.1_5end|description=CAGE_peak_9_at_Mab21l2_5end|id=chr3:86352399..86352406,-|ontology_enrichment_celltype=CL:0000540!3.76e-09!33;CL:0000047!3.76e-09!33;CL:0000031!3.76e-09!33;CL:0000404!3.76e-09!33;CL:0000117!1.30e-07!23;CL:0000337!1.30e-07!23;CL:0000393!5.68e-07!39;CL:0000211!5.68e-07!39|ontology_enrichment_celltype_v019_2=CL:0002612,4.00e-20,3;CL:0000117,4.21e-13,23;CL:0000337,4.21e-13,23;CL:0000120,1.34e-09,3;CL:0000540,5.82e-09,33;CL:0000047,5.82e-09,33;CL:0000031,5.82e-09,33;CL:0000404,5.82e-09,33;CL:0002679,7.32e-08,1;CL:0000393,1.73e-07,39;CL:0000211,1.73e-07,39;CL:0002319,9.81e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.19e-11!9;UBERON:0000019!1.19e-11!9;UBERON:0000047!1.19e-11!9;UBERON:0004088!1.19e-11!9;UBERON:0002104!1.19e-11!9;UBERON:0001456!1.19e-11!9;UBERON:0003072!1.19e-11!9;UBERON:0003071!1.19e-11!9;UBERON:0004128!1.19e-11!9;UBERON:0001444!4.21e-09!11;UBERON:0002240!4.77e-09!6;UBERON:0005174!4.77e-09!6;UBERON:0001137!4.77e-09!6;UBERON:0001948!3.35e-08!5;UBERON:0002315!3.35e-08!5;UBERON:0000020!3.75e-08!12;UBERON:0001032!3.75e-08!12;UBERON:0004456!3.75e-08!12;UBERON:0002346!8.66e-08!71;UBERON:0003075!8.66e-08!71;UBERON:0007284!8.66e-08!71;UBERON:0005085!2.37e-07!13;UBERON:0004121!3.61e-07!102;UBERON:0000924!3.61e-07!102;UBERON:0006601!3.61e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.01e-20,5;UBERON:0002315,1.01e-20,5;UBERON:0002257,4.00e-20,3;UBERON:0002240,2.52e-17,6;UBERON:0005174,2.52e-17,6;UBERON:0001137,2.52e-17,6;UBERON:0000970,3.29e-11,9;UBERON:0000019,3.29e-11,9;UBERON:0000047,3.29e-11,9;UBERON:0010312,3.29e-11,9;UBERON:0004088,3.29e-11,9;UBERON:0002104,3.29e-11,9;UBERON:0001456,3.29e-11,9;UBERON:0003072,3.29e-11,9;UBERON:0004128,3.29e-11,9;UBERON:0003071,3.29e-11,9;UBERON:0001444,3.24e-09,11;UBERON:0003076,8.65e-09,12;UBERON:0003057,8.65e-09,12;UBERON:0000020,1.82e-08,12;UBERON:0001032,1.82e-08,12;UBERON:0004456,1.82e-08,12;UBERON:0000033,7.84e-08,13;UBERON:0005085,7.84e-08,13;UBERON:0002346,5.54e-07,64;UBERON:0003075,5.54e-07,64;UBERON:0007284,5.54e-07,64;UBERON:0004121,8.78e-07,95;UBERON:0000924,8.78e-07,95;UBERON:0006601,8.78e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,3.70293685490423,0.633831403506179,0,0,0.449949858640699,0,0,0,0,0,0,0,0.856952953211411,1.10434270475807,0,0,0,0,0.127687338085188,0,0.263772575460388,0.457438218012048,0,1.3959149950069,0,0.30559649555362,2.94628585473668,1.70846016958924,1.86399445825301,0,0,0,0,0,0,0,0,0,0.511290967734173,0.779358013808606,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,1.17108398666433,0.229902104433473,0.720248519221397,0.753524089178575,1.02054748726992,1.5373646434182,1.3118241438362,0.776110112217047,0.646703978798527,0,1.05570674498369,0.219195732427575,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55945900642281,4.64473343720877,0.77320476793256,0.201683524623343,0.667134131534611,0,0,0,0.754005626400808,0.397912944082302,0.38992817423824,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0.430846795465598,0,0.445597348164788,0.566153061577665,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.399024873401031,0.512200817262403,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0,0,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0,0,0|short_description=p9@Mab21l2}} | ||
|EntrezGene=23937 | |||
|HGNC= | |||
|MCL_coexpression_id=673 | |||
|UniProt=Q8BPP1,O70299 | |||
|association_with_transcript=-194bp_to_ENSMUST00000077524,NM_011839,uc008prj.1_5end | |||
|description=CAGE_peak_9_at_Mab21l2_5end | |||
|id=chr3:86352399..86352406,- | |||
|ontology_enrichment_celltype=CL:0000540!3.76e-09!33;CL:0000047!3.76e-09!33;CL:0000031!3.76e-09!33;CL:0000404!3.76e-09!33;CL:0000117!1.30e-07!23;CL:0000337!1.30e-07!23;CL:0000393!5.68e-07!39;CL:0000211!5.68e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,4.00e-20,3;CL:0000117,4.21e-13,23;CL:0000337,4.21e-13,23;CL:0000120,1.34e-09,3;CL:0000540,5.82e-09,33;CL:0000047,5.82e-09,33;CL:0000031,5.82e-09,33;CL:0000404,5.82e-09,33;CL:0002679,7.32e-08,1;CL:0000393,1.73e-07,39;CL:0000211,1.73e-07,39;CL:0002319,9.81e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.19e-11!9;UBERON:0000019!1.19e-11!9;UBERON:0000047!1.19e-11!9;UBERON:0004088!1.19e-11!9;UBERON:0002104!1.19e-11!9;UBERON:0001456!1.19e-11!9;UBERON:0003072!1.19e-11!9;UBERON:0003071!1.19e-11!9;UBERON:0004128!1.19e-11!9;UBERON:0001444!4.21e-09!11;UBERON:0002240!4.77e-09!6;UBERON:0005174!4.77e-09!6;UBERON:0001137!4.77e-09!6;UBERON:0001948!3.35e-08!5;UBERON:0002315!3.35e-08!5;UBERON:0000020!3.75e-08!12;UBERON:0001032!3.75e-08!12;UBERON:0004456!3.75e-08!12;UBERON:0002346!8.66e-08!71;UBERON:0003075!8.66e-08!71;UBERON:0007284!8.66e-08!71;UBERON:0005085!2.37e-07!13;UBERON:0004121!3.61e-07!102;UBERON:0000924!3.61e-07!102;UBERON:0006601!3.61e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.01e-20,5;UBERON:0002315,1.01e-20,5;UBERON:0002257,4.00e-20,3;UBERON:0002240,2.52e-17,6;UBERON:0005174,2.52e-17,6;UBERON:0001137,2.52e-17,6;UBERON:0000970,3.29e-11,9;UBERON:0000019,3.29e-11,9;UBERON:0000047,3.29e-11,9;UBERON:0010312,3.29e-11,9;UBERON:0004088,3.29e-11,9;UBERON:0002104,3.29e-11,9;UBERON:0001456,3.29e-11,9;UBERON:0003072,3.29e-11,9;UBERON:0004128,3.29e-11,9;UBERON:0003071,3.29e-11,9;UBERON:0001444,3.24e-09,11;UBERON:0003076,8.65e-09,12;UBERON:0003057,8.65e-09,12;UBERON:0000020,1.82e-08,12;UBERON:0001032,1.82e-08,12;UBERON:0004456,1.82e-08,12;UBERON:0000033,7.84e-08,13;UBERON:0005085,7.84e-08,13;UBERON:0002346,5.54e-07,64;UBERON:0003075,5.54e-07,64;UBERON:0007284,5.54e-07,64;UBERON:0004121,8.78e-07,95;UBERON:0000924,8.78e-07,95;UBERON:0006601,8.78e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,3.70293685490423,0.633831403506179,0,0,0.449949858640699,0,0,0,0,0,0,0,0.856952953211411,1.10434270475807,0,0,0,0,0.127687338085188,0,0.263772575460388,0.457438218012048,0,1.3959149950069,0,0.30559649555362,2.94628585473668,1.70846016958924,1.86399445825301,0,0,0,0,0,0,0,0,0,0.511290967734173,0.779358013808606,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,1.17108398666433,0.229902104433473,0.720248519221397,0.753524089178575,1.02054748726992,1.5373646434182,1.3118241438362,0.776110112217047,0.646703978798527,0,1.05570674498369,0.219195732427575,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55945900642281,4.64473343720877,0.77320476793256,0.201683524623343,0.667134131534611,0,0,0,0.754005626400808,0.397912944082302,0.38992817423824,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0.430846795465598,0,0.445597348164788,0.566153061577665,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.399024873401031,0.512200817262403,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0,0,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p9@Mab21l2 | |||
}} |
Revision as of 02:41, 14 September 2013
Short description: | p9@Mab21l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Mab21l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:673 |
Association with transcript: | -194bp_to_ENSMUST00000077524, NM_011839, uc008prj.1_5end |
EntrezGene: | Mab21l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 4.00e-20 | 3 |
CNS neuron (sensu Vertebrata) | 4.21e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.21e-13 | 23 |
granule cell | 1.34e-09 | 3 |
neuron | 5.82e-09 | 33 |
neuronal stem cell | 5.82e-09 | 33 |
neuroblast | 5.82e-09 | 33 |
electrically signaling cell | 5.82e-09 | 33 |
natural helper lymphocyte | 7.32e-08 | 1 |
electrically responsive cell | 1.73e-07 | 39 |
electrically active cell | 1.73e-07 | 39 |
neural cell | 9.81e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 1.01e-20 | 5 |
gray matter of spinal cord | 1.01e-20 | 5 |
ventral horn of spinal cord | 4.00e-20 | 3 |
spinal cord | 2.52e-17 | 6 |
dorsal region element | 2.52e-17 | 6 |
dorsum | 2.52e-17 | 6 |
eye | 3.29e-11 | 9 |
camera-type eye | 3.29e-11 | 9 |
simple eye | 3.29e-11 | 9 |
immature eye | 3.29e-11 | 9 |
ocular region | 3.29e-11 | 9 |
visual system | 3.29e-11 | 9 |
face | 3.29e-11 | 9 |
optic cup | 3.29e-11 | 9 |
optic vesicle | 3.29e-11 | 9 |
eye primordium | 3.29e-11 | 9 |
subdivision of head | 3.24e-09 | 11 |
posterior neural tube | 8.65e-09 | 12 |
chordal neural plate | 8.65e-09 | 12 |
sense organ | 1.82e-08 | 12 |
sensory system | 1.82e-08 | 12 |
entire sense organ system | 1.82e-08 | 12 |
head | 7.84e-08 | 13 |
ectodermal placode | 7.84e-08 | 13 |
neurectoderm | 5.54e-07 | 64 |
neural plate | 5.54e-07 | 64 |
presumptive neural plate | 5.54e-07 | 64 |
ectoderm-derived structure | 8.78e-07 | 95 |
ectoderm | 8.78e-07 | 95 |
presumptive ectoderm | 8.78e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.