FFCP PHASE1:Mm9::chr4:114730288..114730306,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=21349|HGNC=|UniProt=P22091,Q3TZH7|association_with_transcript=-109bp_to_ENSMUST00000161601,uc008uek.1_5end|description=CAGE_peak_8_at_Tal1_5end|id=chr4:114730288..114730306,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000839,4.70e-13,13;CL:0000120,2.28e-12,3;CL:0002027,1.71e-11,3;CL:0002006,1.71e-11,3;CL:0002024,1.71e-11,3;CL:0002613,5.32e-11,3;CL:0000763,1.92e-10,16;CL:0000050,2.27e-10,9;CL:0000049,1.18e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.16e-07,22;UBERON:0007499,4.16e-07,22;UBERON:0006925,4.16e-07,22;UBERON:0009497,4.16e-07,22;UBERON:0000015,4.16e-07,22;UBERON:0002423,4.16e-07,22;UBERON:0006235,4.16e-07,22;UBERON:0008835,4.16e-07,22;UBERON:0003894,4.16e-07,22;UBERON:0004161,4.16e-07,22;UBERON:0008836,4.16e-07,22;UBERON:0000369,8.78e-07,5;UBERON:0002435,8.78e-07,5;UBERON:0000204,8.78e-07,5;UBERON:0010082,8.78e-07,5;UBERON:0009854,9.21e-07,23;UBERON:0009856,9.21e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.41732687172878,2.79824751251259,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,8.25539875497521,5.53558308826113,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,5.26022798234954,4.23192783417626,2.53532561402472,0,0,0.899899717281399,0,0.7104801149461,1.19840044207362,0.384218305321555,0,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0.255374676170375,0.46081959976873,1.31886287730194,1.55528994124096,1.56274011167028,0.279182999001381,0,0.15279824777681,0.883885756421003,0.142371680799103,0.559198337475902,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,1.76922110389975,0,0.662524555381181,0.484875253135222,0,0,0.209446706813455,0,0.239630249011841,0,0.254140454146129,0.898743836428936,0,0,0,0.255715457330331,0.20778804455956,0,0.203678727700633,0.746441823660558,0,0,0.260240885925407,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0.378212160335639,0,0.219195732427575,0,0,0,0,0,0.51469581422943,0.284163499395593,1.44988040774851,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.308534225774757,0.697601834251224,0.268273401399619,0.934122738937356,0.16455984991348,0.492502392237286,0.324275238183423,0.292399974850665,0.219550115291051,0.134206418760372,0,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.701358198903186,0.126473074248515,0,0.156998727841375,0,0,2.8363667971736,1.76903095601883,1.12431056192427,2.02860121388503,2.41177159752417,1.01850340712568,0.863088412352432,1.45921704097532,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.975668239288994,0.157635144106191,0.44292937929755,0,0.163863314715738,0,0.144649058581512,1.50791283939272,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,2.05045056957423,0.412773735926445,0.555583582109135,0.565105371014073,2.05041341581538,0.915112692826091,1.01987057996313,0.69975726161829,0.967399816630967,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.853668028770671,0.243106717068294,0.628839487883947,0.735374033800057,0,0.206035057238894,0.320919209591815,0,0,0.377252682772152,0.37456602987953,0.320125762024346,0.402048282689293,0.476293691283074,0,0.578727661391115,0,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0,0.188218760830661,0.423073039458382,0,0.526139422875686,0.407412341537585,0,0,0,0,0.154936841185966,0.578719832943424,0,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0|short_description=p8@Tal1}} | ||
|EntrezGene=21349 | |||
|HGNC= | |||
|UniProt=P22091,Q3TZH7 | |||
|association_with_transcript=-109bp_to_ENSMUST00000161601,uc008uek.1_5end | |||
|description=CAGE_peak_8_at_Tal1_5end | |||
|id=chr4:114730288..114730306,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,4.70e-13,13;CL:0000120,2.28e-12,3;CL:0002027,1.71e-11,3;CL:0002006,1.71e-11,3;CL:0002024,1.71e-11,3;CL:0002613,5.32e-11,3;CL:0000763,1.92e-10,16;CL:0000050,2.27e-10,9;CL:0000049,1.18e-08,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.16e-07,22;UBERON:0007499,4.16e-07,22;UBERON:0006925,4.16e-07,22;UBERON:0009497,4.16e-07,22;UBERON:0000015,4.16e-07,22;UBERON:0002423,4.16e-07,22;UBERON:0006235,4.16e-07,22;UBERON:0008835,4.16e-07,22;UBERON:0003894,4.16e-07,22;UBERON:0004161,4.16e-07,22;UBERON:0008836,4.16e-07,22;UBERON:0000369,8.78e-07,5;UBERON:0002435,8.78e-07,5;UBERON:0000204,8.78e-07,5;UBERON:0010082,8.78e-07,5;UBERON:0009854,9.21e-07,23;UBERON:0009856,9.21e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.41732687172878,2.79824751251259,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,8.25539875497521,5.53558308826113,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,5.26022798234954,4.23192783417626,2.53532561402472,0,0,0.899899717281399,0,0.7104801149461,1.19840044207362,0.384218305321555,0,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0.255374676170375,0.46081959976873,1.31886287730194,1.55528994124096,1.56274011167028,0.279182999001381,0,0.15279824777681,0.883885756421003,0.142371680799103,0.559198337475902,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,1.76922110389975,0,0.662524555381181,0.484875253135222,0,0,0.209446706813455,0,0.239630249011841,0,0.254140454146129,0.898743836428936,0,0,0,0.255715457330331,0.20778804455956,0,0.203678727700633,0.746441823660558,0,0,0.260240885925407,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0.378212160335639,0,0.219195732427575,0,0,0,0,0,0.51469581422943,0.284163499395593,1.44988040774851,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.308534225774757,0.697601834251224,0.268273401399619,0.934122738937356,0.16455984991348,0.492502392237286,0.324275238183423,0.292399974850665,0.219550115291051,0.134206418760372,0,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.701358198903186,0.126473074248515,0,0.156998727841375,0,0,2.8363667971736,1.76903095601883,1.12431056192427,2.02860121388503,2.41177159752417,1.01850340712568,0.863088412352432,1.45921704097532,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.975668239288994,0.157635144106191,0.44292937929755,0,0.163863314715738,0,0.144649058581512,1.50791283939272,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,2.05045056957423,0.412773735926445,0.555583582109135,0.565105371014073,2.05041341581538,0.915112692826091,1.01987057996313,0.69975726161829,0.967399816630967,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.853668028770671,0.243106717068294,0.628839487883947,0.735374033800057,0,0.206035057238894,0.320919209591815,0,0,0.377252682772152,0.37456602987953,0.320125762024346,0.402048282689293,0.476293691283074,0,0.578727661391115,0,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0,0.188218760830661,0.423073039458382,0,0.526139422875686,0.407412341537585,0,0,0,0,0.154936841185966,0.578719832943424,0,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0 | |||
|short_description=p8@Tal1 | |||
}} |
Revision as of 03:28, 14 September 2013
Short description: | p8@Tal1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Tal1_5end |
Coexpression cluster: | NA |
Association with transcript: | -109bp_to_ENSMUST00000161601, uc008uek.1_5end |
EntrezGene: | Tal1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 4.70e-13 | 13 |
granule cell | 2.28e-12 | 3 |
CD9-positive, CD41-positive megakaryocyte cell | 1.71e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.71e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.71e-11 | 3 |
striatum neuron | 5.32e-11 | 3 |
myeloid cell | 1.92e-10 | 16 |
megakaryocyte-erythroid progenitor cell | 2.27e-10 | 9 |
common myeloid progenitor | 1.18e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
liver | 4.16e-07 | 22 |
epithelial sac | 4.16e-07 | 22 |
digestive gland | 4.16e-07 | 22 |
epithelium of foregut-midgut junction | 4.16e-07 | 22 |
anatomical boundary | 4.16e-07 | 22 |
hepatobiliary system | 4.16e-07 | 22 |
foregut-midgut junction | 4.16e-07 | 22 |
hepatic diverticulum | 4.16e-07 | 22 |
liver primordium | 4.16e-07 | 22 |
septum transversum | 4.16e-07 | 22 |
liver bud | 4.16e-07 | 22 |
corpus striatum | 8.78e-07 | 5 |
striatum | 8.78e-07 | 5 |
ventral part of telencephalon | 8.78e-07 | 5 |
future corpus striatum | 8.78e-07 | 5 |
digestive tract diverticulum | 9.21e-07 | 23 |
sac | 9.21e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.