FFCP PHASE1:Mm9::chr4:140172977..140172999,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72754|HGNC=|MCL_coexpression_id=1525|UniProt=A8Y5U3|association_with_transcript=0bp_to_ENSMUST00000154979_5end|description=CAGE_peak_5_at_Arhgef10l_5end|id=chr4:140172977..140172999,-|ontology_enrichment_celltype=CL:0000066!3.90e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,1.36e-12,25;CL:0000223,8.86e-11,20;CL:0002563,1.06e-09,9;CL:0002251,1.06e-09,9;CL:0000182,8.12e-09,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!9.65e-28!128;UBERON:0001555!9.65e-28!128;UBERON:0007026!9.65e-28!128;UBERON:0004119!1.44e-27!130;UBERON:0000925!1.44e-27!130;UBERON:0006595!1.44e-27!130;UBERON:0004921!2.61e-26!126;UBERON:0004185!2.61e-26!126;UBERON:0000160!6.84e-25!43;UBERON:0005409!3.79e-23!59;UBERON:0009854!1.09e-14!23;UBERON:0009856!1.09e-14!23;UBERON:0002107!7.44e-14!22;UBERON:0007499!7.44e-14!22;UBERON:0006925!7.44e-14!22;UBERON:0009497!7.44e-14!22;UBERON:0000015!7.44e-14!22;UBERON:0002423!7.44e-14!22;UBERON:0006235!7.44e-14!22;UBERON:0008835!7.44e-14!22;UBERON:0003894!7.44e-14!22;UBERON:0004161!7.44e-14!22;UBERON:0008836!7.44e-14!22;UBERON:0005177!9.39e-14!85;UBERON:0002108!2.54e-12!16;UBERON:0001041!2.13e-11!92;UBERON:0000466!2.46e-11!79;UBERON:0002365!3.88e-11!25;UBERON:0002330!3.88e-11!25;UBERON:0000077!7.89e-11!97;UBERON:0001045!1.39e-10!13;UBERON:0000344!4.72e-10!15;UBERON:0001264!9.32e-10!12;UBERON:0003922!9.32e-10!12;UBERON:0002114!9.32e-10!12;UBERON:0003923!9.32e-10!12;UBERON:0003924!9.32e-10!12;UBERON:0003921!9.32e-10!12;UBERON:0002100!1.91e-09!98;UBERON:0009569!2.85e-09!66;UBERON:0005911!2.87e-09!69;UBERON:0001242!8.29e-09!13;UBERON:0000060!8.29e-09!13;UBERON:0001262!8.29e-09!13;UBERON:0004786!8.29e-09!13;UBERON:0005172!3.10e-08!49;UBERON:0005173!3.10e-08!49;UBERON:0002417!3.10e-08!49;UBERON:0000916!3.10e-08!49;UBERON:0003929!1.12e-07!55;UBERON:0003104!1.51e-07!131;UBERON:0009142!1.51e-07!131;UBERON:0000481!5.95e-07!230;UBERON:0004923!9.00e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0009854,8.80e-21,23;UBERON:0009856,8.80e-21,23;UBERON:0002107,2.74e-19,22;UBERON:0007499,2.74e-19,22;UBERON:0006925,2.74e-19,22;UBERON:0009497,2.74e-19,22;UBERON:0000015,2.74e-19,22;UBERON:0002423,2.74e-19,22;UBERON:0006235,2.74e-19,22;UBERON:0008835,2.74e-19,22;UBERON:0003894,2.74e-19,22;UBERON:0004161,2.74e-19,22;UBERON:0008836,2.74e-19,22;UBERON:0002365,2.24e-16,25;UBERON:0002330,2.24e-16,25;UBERON:0000160,9.79e-16,31;UBERON:0001007,4.88e-15,116;UBERON:0001555,4.88e-15,116;UBERON:0007026,4.88e-15,116;UBERON:0004119,1.35e-14,118;UBERON:0000925,1.35e-14,118;UBERON:0006595,1.35e-14,118;UBERON:0000344,2.40e-14,15;UBERON:0004921,1.61e-13,114;UBERON:0003929,1.12e-12,55;UBERON:0001264,1.43e-12,12;UBERON:0001242,4.67e-12,13;UBERON:0001262,4.67e-12,13;UBERON:0004786,4.67e-12,13;UBERON:0005409,7.37e-11,47;UBERON:0000949,1.31e-10,72;UBERON:0005177,7.12e-10,79;UBERON:0003350,1.06e-09,9;UBERON:0004808,1.06e-09,9;UBERON:0001277,1.06e-09,9;UBERON:0005911,1.26e-09,69;UBERON:0000490,1.92e-09,66;UBERON:0004923,2.53e-09,24;UBERON:0002100,9.04e-08,90;UBERON:0000485,1.15e-07,11;UBERON:0002075,4.53e-07,19;UBERON:0005256,4.88e-07,45|phase1_expression=0,1.04692622291808,2.27499619694768,0.30246421130683,1.00179145989269,4.36486106970913,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,3.03985603307473,2.2940928106717,2.8711598205751,3.4460959692726,4.09395342103189,3.99049180858385,1.26015064879965,5.32153225572731,0,0,0,6.35473563452804,4.15586613396231,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,14.6272059086836,6.79971333707751,8.63525106620507,14.9448576012964,14.7848872742121,0.842666520790511,0,0,0,0,0,0,0,0,0.253359865475099,0,1.48439043634778,0,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0,5.6854842578906,0,0,0,0,0,9.31958806090611,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0.330418782983798,1.58670339998127,0.213288250535234,0,0.77320476793256,2.01683524623343,0.889512175379481,1.14135375667535,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,2.14460495831032,1.79763881730844,1.08069024937347,1.1948476395262,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.252946148497029,0.442830443938806,0.156998727841375,0.370191491765402,7.41131567717872,0,0.196558995113203,1.12431056192427,0.202860121388503,0.241177159752417,0.50925170356284,1.43848068725405,5.18832725680113,4.3929826110093,25.8782771749238,10.0478055870496,9.98520553966594,14.6495749209325,10.7638448113147,12.0610880340842,0.369506380333209,0,0,0,0.234690248288502,0,0.952174563544055,0.195133647857799,1.89162172927429,0.8858587585951,0.478364305972461,0.163863314715738,0.863424909329478,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5490276679926,0.728341908464944,0.90697067089425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| ||
|EntrezGene=72754 | |||
|HGNC= | |||
|MCL_coexpression_id=1525 | |||
|UniProt=A8Y5U3 | |||
|association_with_transcript=0bp_to_ENSMUST00000154979_5end | |||
|description=CAGE_peak_5_at_Arhgef10l_5end | |||
|id=chr4:140172977..140172999,- | |||
|ontology_enrichment_celltype=CL:0000066!3.90e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.36e-12,25;CL:0000223,8.86e-11,20;CL:0002563,1.06e-09,9;CL:0002251,1.06e-09,9;CL:0000182,8.12e-09,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!9.65e-28!128;UBERON:0001555!9.65e-28!128;UBERON:0007026!9.65e-28!128;UBERON:0004119!1.44e-27!130;UBERON:0000925!1.44e-27!130;UBERON:0006595!1.44e-27!130;UBERON:0004921!2.61e-26!126;UBERON:0004185!2.61e-26!126;UBERON:0000160!6.84e-25!43;UBERON:0005409!3.79e-23!59;UBERON:0009854!1.09e-14!23;UBERON:0009856!1.09e-14!23;UBERON:0002107!7.44e-14!22;UBERON:0007499!7.44e-14!22;UBERON:0006925!7.44e-14!22;UBERON:0009497!7.44e-14!22;UBERON:0000015!7.44e-14!22;UBERON:0002423!7.44e-14!22;UBERON:0006235!7.44e-14!22;UBERON:0008835!7.44e-14!22;UBERON:0003894!7.44e-14!22;UBERON:0004161!7.44e-14!22;UBERON:0008836!7.44e-14!22;UBERON:0005177!9.39e-14!85;UBERON:0002108!2.54e-12!16;UBERON:0001041!2.13e-11!92;UBERON:0000466!2.46e-11!79;UBERON:0002365!3.88e-11!25;UBERON:0002330!3.88e-11!25;UBERON:0000077!7.89e-11!97;UBERON:0001045!1.39e-10!13;UBERON:0000344!4.72e-10!15;UBERON:0001264!9.32e-10!12;UBERON:0003922!9.32e-10!12;UBERON:0002114!9.32e-10!12;UBERON:0003923!9.32e-10!12;UBERON:0003924!9.32e-10!12;UBERON:0003921!9.32e-10!12;UBERON:0002100!1.91e-09!98;UBERON:0009569!2.85e-09!66;UBERON:0005911!2.87e-09!69;UBERON:0001242!8.29e-09!13;UBERON:0000060!8.29e-09!13;UBERON:0001262!8.29e-09!13;UBERON:0004786!8.29e-09!13;UBERON:0005172!3.10e-08!49;UBERON:0005173!3.10e-08!49;UBERON:0002417!3.10e-08!49;UBERON:0000916!3.10e-08!49;UBERON:0003929!1.12e-07!55;UBERON:0003104!1.51e-07!131;UBERON:0009142!1.51e-07!131;UBERON:0000481!5.95e-07!230;UBERON:0004923!9.00e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,8.80e-21,23;UBERON:0009856,8.80e-21,23;UBERON:0002107,2.74e-19,22;UBERON:0007499,2.74e-19,22;UBERON:0006925,2.74e-19,22;UBERON:0009497,2.74e-19,22;UBERON:0000015,2.74e-19,22;UBERON:0002423,2.74e-19,22;UBERON:0006235,2.74e-19,22;UBERON:0008835,2.74e-19,22;UBERON:0003894,2.74e-19,22;UBERON:0004161,2.74e-19,22;UBERON:0008836,2.74e-19,22;UBERON:0002365,2.24e-16,25;UBERON:0002330,2.24e-16,25;UBERON:0000160,9.79e-16,31;UBERON:0001007,4.88e-15,116;UBERON:0001555,4.88e-15,116;UBERON:0007026,4.88e-15,116;UBERON:0004119,1.35e-14,118;UBERON:0000925,1.35e-14,118;UBERON:0006595,1.35e-14,118;UBERON:0000344,2.40e-14,15;UBERON:0004921,1.61e-13,114;UBERON:0003929,1.12e-12,55;UBERON:0001264,1.43e-12,12;UBERON:0001242,4.67e-12,13;UBERON:0001262,4.67e-12,13;UBERON:0004786,4.67e-12,13;UBERON:0005409,7.37e-11,47;UBERON:0000949,1.31e-10,72;UBERON:0005177,7.12e-10,79;UBERON:0003350,1.06e-09,9;UBERON:0004808,1.06e-09,9;UBERON:0001277,1.06e-09,9;UBERON:0005911,1.26e-09,69;UBERON:0000490,1.92e-09,66;UBERON:0004923,2.53e-09,24;UBERON:0002100,9.04e-08,90;UBERON:0000485,1.15e-07,11;UBERON:0002075,4.53e-07,19;UBERON:0005256,4.88e-07,45 | |||
|phase1_expression=0,1.04692622291808,2.27499619694768,0.30246421130683,1.00179145989269,4.36486106970913,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,3.03985603307473,2.2940928106717,2.8711598205751,3.4460959692726,4.09395342103189,3.99049180858385,1.26015064879965,5.32153225572731,0,0,0,6.35473563452804,4.15586613396231,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,14.6272059086836,6.79971333707751,8.63525106620507,14.9448576012964,14.7848872742121,0.842666520790511,0,0,0,0,0,0,0,0,0.253359865475099,0,1.48439043634778,0,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0,5.6854842578906,0,0,0,0,0,9.31958806090611,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0.330418782983798,1.58670339998127,0.213288250535234,0,0.77320476793256,2.01683524623343,0.889512175379481,1.14135375667535,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,2.14460495831032,1.79763881730844,1.08069024937347,1.1948476395262,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.252946148497029,0.442830443938806,0.156998727841375,0.370191491765402,7.41131567717872,0,0.196558995113203,1.12431056192427,0.202860121388503,0.241177159752417,0.50925170356284,1.43848068725405,5.18832725680113,4.3929826110093,25.8782771749238,10.0478055870496,9.98520553966594,14.6495749209325,10.7638448113147,12.0610880340842,0.369506380333209,0,0,0,0.234690248288502,0,0.952174563544055,0.195133647857799,1.89162172927429,0.8858587585951,0.478364305972461,0.163863314715738,0.863424909329478,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5490276679926,0.728341908464944,0.906970670894253,5.09233715340925,3.83892460745005,3.68922177532713,1.80899805217755,7.63420831902762,3.56497378384721,12.009396801561,11.5960469432499,9.28219889233682,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,2.33184669303881,0,0,0.619160603889667,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0,0.655087691238533,0.674321731924103,1.98368293740806,0.785267825952089,5.96228877142247,0,0,0,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0.563047426353546,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.516919220600519,0.476293691283074,0.463537303779422,0.38581844092741,0,0.294397840268795,0.342869252385415,0.532427418478012,0.476872379894642,0.290692833264657,0.282328141245992,0.507687647350059,0.182927972872773,0.263069711437843,0.407412341537585,1.68342681497322,0.237270036248348,0.394017929502254,0,0.154936841185966,0,0,0.467863216890817,0.859484216193193,0,0.220591419119515,0 | |||
|short_description=p5@Arhgef10l | |||
}} |
Revision as of 04:17, 14 September 2013
Short description: | p5@Arhgef10l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Arhgef10l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1525 |
Association with transcript: | 0bp_to_ENSMUST00000154979_5end |
EntrezGene: | Arhgef10l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.36e-12 | 25 |
endodermal cell | 8.86e-11 | 20 |
intestinal epithelial cell | 1.06e-09 | 9 |
epithelial cell of alimentary canal | 1.06e-09 | 9 |
hepatocyte | 8.12e-09 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.