FFCP PHASE1:Hg19::chr8:37654457..37654468,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25960|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17849|TSSclassifier=S|UniProt=|association_with_transcript=33bp_to_ENST00000315215,uc003xki.2,uc003xkj.2,uc010lvy.2_5end|coexpression_cluster_id=C4749|description=CAGE_peak_2_at_GPR124_5end|id=chr8:37654457..37654468,+|ontology_enrichment_celltype=CL:0000055!1.99e-27!180;CL:0000057!6.47e-19!75;CL:0000183!4.60e-09!59;CL:0002620!1.49e-08!23;CL:0000187!2.57e-08!54;CL:0000680!5.02e-08!57;CL:0000056!5.02e-08!57;CL:0000355!5.02e-08!57;CL:0000192!9.80e-08!42;CL:0000514!9.80e-08!42;CL:0000393!6.04e-07!60;CL:0000211!6.04e-07!60|ontology_enrichment_celltype_v019=CL:0002620;4.29e-08;23!CL:0000057;2.47e-07;73!CL:0000192;7.47e-07;43|ontology_enrichment_celltype_v019_2=CL:0000057,7.68e-20,76;CL:0000192,4.26e-09,43;CL:0000514,4.26e-09,43;CL:0002620,1.66e-08,23;CL:0000187,3.95e-08,55;CL:0000680,2.59e-07,58;CL:0000056,2.59e-07,58;CL:0000355,2.59e-07,58;CL:0000136,2.94e-07,15|ontology_enrichment_development_v019=CL:0000514;7.47e-07;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!2.85e-10!83;UBERON:0002329!2.85e-10!83;UBERON:0003077!2.85e-10!83;UBERON:0003059!2.85e-10!83;UBERON:0007282!2.85e-10!83;UBERON:0009618!2.85e-10!83;UBERON:0007285!2.85e-10!83;UBERON:0000475!1.32e-09!365;UBERON:0000468!4.10e-09!659;UBERON:0004872!5.26e-09!84;UBERON:0002385!6.85e-09!63;UBERON:0001015!6.85e-09!63;UBERON:0000383!6.85e-09!63;UBERON:0004290!8.73e-09!70;UBERON:0001134!2.89e-08!61;UBERON:0002036!2.89e-08!61;UBERON:0003082!2.89e-08!61;UBERON:0005256!5.05e-08!143;UBERON:0002049!6.25e-08!79;UBERON:0007798!6.25e-08!79;UBERON:0000479!2.24e-07!787;UBERON:0004535!6.53e-07!110|ontology_enrichment_uberon_v019=UBERON:0003688;7.23e-08;6!UBERON:0002358;7.23e-08;6!UBERON:0003684;7.23e-08;6!UBERON:0001178;7.23e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.50e-08,99;UBERON:0003688,8.71e-08,6;UBERON:0002358,8.71e-08,6;UBERON:0003684,8.71e-08,6;UBERON:0001178,8.71e-08,6;UBERON:0005256,1.72e-07,122;UBERON:0002385,1.78e-07,64;UBERON:0001015,1.78e-07,64;UBERON:0000383,1.78e-07,64;UBERON:0001134,4.07e-07,62;UBERON:0002036,4.07e-07,62;UBERON:0003082,4.07e-07,62;UBERON:0007524,8.33e-07,73|phase1_expression=1.2717486548939,0.856402095563933,2.53717927372748,2.00146596706261,4.91657203870017,2.61701557230111,0,0,2.35067065379855,0,0.697801167972428,0,0,0.37129905888014,0.662794751455832,2.6893005858071,0,1.46062018077475,0.487932798790507,0.123121058076788,0.204000691244253,0.626909442956176,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.17366355134002,2.1686349143074,0.50133791063589,1.01392563272577,0,0.973269740605272,0.378139268656271,0.221729397462564,0.263504357079378,1.17881167947941,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,1.13061588384802,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0.402829317109147,0.760272105718513,1.22031028774085,0,2.43042584364528,0.17859945656816,0,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,4.47274756525787,2.40597972162702,0.397227542439656,4.01571269048339,1.06400514659507,1.68203280042692,1.06748995729705,1.97334038733728,1.55605517699883,0.67355336034844,0.653847612453835,2.57307626996383,2.30470369792,2.10889288650417,0.312160076830321,0,0.896692083310806,0.23486899728753,0.971237666208789,0.421352420106746,0.408308342509787,1.22834317311768,1.75653827998801,5.94001428641027,5.43987244412825,0,3.59309070908119,0.168336113954066,1.00094815897571,0.277064115484183,3.95079858792754,2.75839016219118,4.95785594391769,0.794025282120147,1.79389635688862,5.76604949810132,4.02670612203168,3.30100205692843,3.60683852334536,4.63752972082133,6.51408997160564,2.02531598689519,1.85130309806277,2.77677151668526,5.98324341174946,4.68773564774555,2.84007674013291,1.91428986632517,1.86516651541536,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0.252320850875628,0,1.56449532329816,4.5026865673502,0,2.3218396401599,1.44375896333917,0,0,0,0,0.217879444092406,0,0,0,0,0,0,1.6462960453256,4.41026134156626,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,1.62904152655162,0,0,0.927443239800615,1.40890433082986,0.721832238805369,1.38895653772983,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0.698476837213859,1.14596527667483,0,1.71072446022705,0.616964956219941,0,0.285826432630578,0.897048674762886,2.61576041299968,0.8800594298514,1.93907573636667,3.57656445851882,0.845302752556,7.44626726437637,4.16029747645464,0.257207374262142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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17849 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=33bp_to_ENST00000315215,uc003xki.2,uc003xkj.2,uc010lvy.2_5end | |||
|coexpression_cluster_id=C4749 | |||
|description=CAGE_peak_2_at_GPR124_5end | |||
|id=chr8:37654457..37654468,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.99e-27!180;CL:0000057!6.47e-19!75;CL:0000183!4.60e-09!59;CL:0002620!1.49e-08!23;CL:0000187!2.57e-08!54;CL:0000680!5.02e-08!57;CL:0000056!5.02e-08!57;CL:0000355!5.02e-08!57;CL:0000192!9.80e-08!42;CL:0000514!9.80e-08!42;CL:0000393!6.04e-07!60;CL:0000211!6.04e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.29e-08;23!CL:0000057;2.47e-07;73!CL:0000192;7.47e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.68e-20,76;CL:0000192,4.26e-09,43;CL:0000514,4.26e-09,43;CL:0002620,1.66e-08,23;CL:0000187,3.95e-08,55;CL:0000680,2.59e-07,58;CL:0000056,2.59e-07,58;CL:0000355,2.59e-07,58;CL:0000136,2.94e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;7.47e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.85e-10!83;UBERON:0002329!2.85e-10!83;UBERON:0003077!2.85e-10!83;UBERON:0003059!2.85e-10!83;UBERON:0007282!2.85e-10!83;UBERON:0009618!2.85e-10!83;UBERON:0007285!2.85e-10!83;UBERON:0000475!1.32e-09!365;UBERON:0000468!4.10e-09!659;UBERON:0004872!5.26e-09!84;UBERON:0002385!6.85e-09!63;UBERON:0001015!6.85e-09!63;UBERON:0000383!6.85e-09!63;UBERON:0004290!8.73e-09!70;UBERON:0001134!2.89e-08!61;UBERON:0002036!2.89e-08!61;UBERON:0003082!2.89e-08!61;UBERON:0005256!5.05e-08!143;UBERON:0002049!6.25e-08!79;UBERON:0007798!6.25e-08!79;UBERON:0000479!2.24e-07!787;UBERON:0004535!6.53e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.23e-08;6!UBERON:0002358;7.23e-08;6!UBERON:0003684;7.23e-08;6!UBERON:0001178;7.23e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.50e-08,99;UBERON:0003688,8.71e-08,6;UBERON:0002358,8.71e-08,6;UBERON:0003684,8.71e-08,6;UBERON:0001178,8.71e-08,6;UBERON:0005256,1.72e-07,122;UBERON:0002385,1.78e-07,64;UBERON:0001015,1.78e-07,64;UBERON:0000383,1.78e-07,64;UBERON:0001134,4.07e-07,62;UBERON:0002036,4.07e-07,62;UBERON:0003082,4.07e-07,62;UBERON:0007524,8.33e-07,73 | |||
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| |||
|short_description=p2@GPR124 | |||
}} |
Revision as of 05:10, 14 September 2013
Short description: | p2@GPR124 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GPR124_5end |
Coexpression cluster: | C4749_Mesenchymal_Hepatic_sacrococcigeal_rhabdomyosarcoma_Smooth_Trabecular_Fibroblast |
Association with transcript: | 33bp_to_ENST00000315215, uc003xki.2, uc003xkj.2, uc010lvy.2_5end |
EntrezGene: | GPR124 |
HGNC: | 17849 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.68e-20 | 76 |
smooth muscle cell | 4.26e-09 | 43 |
smooth muscle myoblast | 4.26e-09 | 43 |
skin fibroblast | 1.66e-08 | 23 |
muscle cell | 3.95e-08 | 55 |
muscle precursor cell | 2.59e-07 | 58 |
myoblast | 2.59e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.59e-07 | 58 |
fat cell | 2.94e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.50e-08 | 99 |
omentum | 8.71e-08 | 6 |
peritoneum | 8.71e-08 | 6 |
abdominal cavity | 8.71e-08 | 6 |
visceral peritoneum | 8.71e-08 | 6 |
trunk mesenchyme | 1.72e-07 | 122 |
muscle tissue | 1.78e-07 | 64 |
musculature | 1.78e-07 | 64 |
musculature of body | 1.78e-07 | 64 |
skeletal muscle tissue | 4.07e-07 | 62 |
striated muscle tissue | 4.07e-07 | 62 |
myotome | 4.07e-07 | 62 |
dense mesenchyme tissue | 8.33e-07 | 73 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.