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FFCP PHASE1:Mm9::chr5:148241729..148241793,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=72587|HGNC=|MCL_coexpression_id=298|UniProt=Q640Q5,F8VPL8|association_with_transcript=-362bp_to_ENSMUST00000031651,ENSMUST00000085571,NM_028291,uc009aod.2_5end|description=CAGE_peak_1_at_Pan3_5end|id=chr5:148241729..148241793,+|ontology_enrichment_celltype=CL:0000988!1.25e-07!32;CL:0002032!1.25e-07!32;CL:0000037!1.25e-07!32;CL:0000566!1.25e-07!32;CL:0000837!1.25e-07!32;CL:0002031!2.68e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,1.25e-07,32;CL:0002032,1.25e-07,32;CL:0000037,1.25e-07,32;CL:0000837,1.25e-07,32;CL:0002031,2.68e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.26e-10!45;UBERON:0003061!2.26e-10!45;UBERON:0004177!1.54e-08!29;UBERON:0002193!2.04e-08!48;UBERON:0006562!2.74e-07!24;UBERON:0001557!2.74e-07!24;UBERON:0001042!2.74e-07!24;UBERON:0008814!2.74e-07!24;UBERON:0009145!2.74e-07!24;UBERON:0003408!4.40e-07!24;UBERON:0002370!4.58e-07!23;UBERON:0000974!4.58e-07!23;UBERON:0004807!4.58e-07!23;UBERON:0005058!4.58e-07!23;UBERON:0003351!4.58e-07!23;UBERON:0009113!4.58e-07!23;UBERON:0003295!4.58e-07!23;UBERON:0009722!4.58e-07!23;UBERON:0005562!4.58e-07!23;UBERON:0007690!4.58e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.26e-10,45;UBERON:0003061,2.26e-10,45;UBERON:0000077,3.28e-09,35;UBERON:0004177,1.54e-08,29;UBERON:0005057,1.54e-08,29;UBERON:0002193,2.04e-08,48;UBERON:0002405,2.04e-08,48;UBERON:0006562,2.74e-07,24;UBERON:0001557,2.74e-07,24;UBERON:0001042,2.74e-07,24;UBERON:0008814,2.74e-07,24;UBERON:0009145,2.74e-07,24;UBERON:0003408,4.40e-07,24;UBERON:0002370,4.58e-07,23;UBERON:0000974,4.58e-07,23;UBERON:0004807,4.58e-07,23;UBERON:0005058,4.58e-07,23;UBERON:0003351,4.58e-07,23;UBERON:0009113,4.58e-07,23;UBERON:0003295,4.58e-07,23;UBERON:0009722,4.58e-07,23;UBERON:0005562,4.58e-07,23;UBERON:0007690,4.58e-07,23;UBERON:0007811,8.86e-07,36|phase1_expression=17.6163731815273,19.1936474201649,20.4749657725291,29.0365642854557,28.0501608769954,16.2842893754533,14.2503710763271,36.0254072401998,27.3130120974233,20.8317428426574,15.7520530767465,18.6666852049087,37.3217591250028,41.6121115514428,20.6528052325711,26.1193094932875,37.7763414189199,34.8585692720853,34.8270661358576,32.2536135366503,20.5804762165589,29.5887034578638,24.8139799681989,9.75953779039781,8.94696196161963,15.5042630311055,8.61523992318149,13.3592164265251,11.2113817479261,12.6015064879965,9.3126814475228,27.9413496322238,28.9080450164748,0,21.6638714813456,13.7974755647549,14.2918549383658,59.8500231953778,34.3787551590472,45.5465657257204,42.940898626264,58.7419117064263,45.6379731849284,11.330713617802,11.7597240214637,15.4179271815813,3.9119567217402,4.79655344036982,5.71184075109627,6.22175677037707,5.31948402176378,0,46.475781877993,46.423177088726,55.1193830593641,12.8629718017974,13.1805382371828,18.5641953219879,10.3181395038395,14.2827564403449,10.775133859605,6.43804610931351,6.22506357277798,20.6976934974722,18.7884608887725,19.1829631035447,11.085204089181,9.98967593836042,15.0349937847293,12.9605700798423,13.8814474491912,7.14127461009509,7.50953039235486,12.1265891222804,12.555756703389,11.9498442259303,11.0115880999389,11.8749224419225,13.5173749265494,10.6827893061457,10.0636407962651,11.4600941522487,9.77140496504833,7.87867654044352,12.2238598221448,10.3120004915784,8.54230084794618,5.96478226640962,11.7375599666435,12.318164297406,25.5080750057476,6.0229671388697,6.79971333707751,10.2543606411185,7.79731700937203,8.96053774194671,14.8871085339657,8.69194645148094,5.45550609666024,7.77347063922748,17.8871143116384,26.9485602570067,7.64415719119937,21.3320010945999,10.3915699685383,9.12095515710355,13.1436355703844,17.3559497172971,9.83963957859253,21.3756680253348,9.02123699183906,9.43842982767638,9.91646638201052,12.2085338847624,22.1066769415125,19.2269884734403,24.472301805703,9.39895819979426,21.230653246797,14.7207833452142,24.0717255121829,18.4252596191384,9.31958806090611,28.1069565131085,54.4561437714983,13.2837668708468,45.8891926857675,24.5960119707297,34.5631017638736,11.9832511523858,12.3525162761029,11.1832373380449,15.9918374576894,20.2015211290961,11.8439185398949,14.4394724130304,18.5347642207576,26.74749868117,24.7668303265001,21.8859530121933,10.4096354370163,10.5754968039398,13.8647839950119,15.5225962370787,26.1940521732612,18.5764894413032,23.9876414872906,14.4873887613849,8.62271971731369,12.8592134514117,10.205165201509,9.86380795924087,15.5706459566335,16.3678518265418,17.0799173218593,14.3304672109315,11.937624184325,18.2717014051448,17.0498099637356,11.5990432619881,9.61556845922494,7.20248245844059,11.6004920436753,9.05115466038058,12.3413690309903,10.4640275137684,9.65784245038629,14.8291984806305,12.0128690436841,11.4917224855367,15.727349051896,12.7193989060039,6.36695334344047,14.4942932261202,17.0334858336943,15.4356918568927,18.1730330641089,11.1069237998689,10.8777007772969,13.9342003116263,14.0465532841082,15.7313149206207,11.1189021922435,10.6526350623033,16.1339880925134,8.39964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|EntrezGene=72587
|HGNC=
|MCL_coexpression_id=298
|UniProt=Q640Q5,F8VPL8
|association_with_transcript=-362bp_to_ENSMUST00000031651,ENSMUST00000085571,NM_028291,uc009aod.2_5end
|description=CAGE_peak_1_at_Pan3_5end
|id=chr5:148241729..148241793,+
|ontology_enrichment_celltype=CL:0000988!1.25e-07!32;CL:0002032!1.25e-07!32;CL:0000037!1.25e-07!32;CL:0000566!1.25e-07!32;CL:0000837!1.25e-07!32;CL:0002031!2.68e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000988,1.25e-07,32;CL:0002032,1.25e-07,32;CL:0000037,1.25e-07,32;CL:0000837,1.25e-07,32;CL:0002031,2.68e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!2.26e-10!45;UBERON:0003061!2.26e-10!45;UBERON:0004177!1.54e-08!29;UBERON:0002193!2.04e-08!48;UBERON:0006562!2.74e-07!24;UBERON:0001557!2.74e-07!24;UBERON:0001042!2.74e-07!24;UBERON:0008814!2.74e-07!24;UBERON:0009145!2.74e-07!24;UBERON:0003408!4.40e-07!24;UBERON:0002370!4.58e-07!23;UBERON:0000974!4.58e-07!23;UBERON:0004807!4.58e-07!23;UBERON:0005058!4.58e-07!23;UBERON:0003351!4.58e-07!23;UBERON:0009113!4.58e-07!23;UBERON:0003295!4.58e-07!23;UBERON:0009722!4.58e-07!23;UBERON:0005562!4.58e-07!23;UBERON:0007690!4.58e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.26e-10,45;UBERON:0003061,2.26e-10,45;UBERON:0000077,3.28e-09,35;UBERON:0004177,1.54e-08,29;UBERON:0005057,1.54e-08,29;UBERON:0002193,2.04e-08,48;UBERON:0002405,2.04e-08,48;UBERON:0006562,2.74e-07,24;UBERON:0001557,2.74e-07,24;UBERON:0001042,2.74e-07,24;UBERON:0008814,2.74e-07,24;UBERON:0009145,2.74e-07,24;UBERON:0003408,4.40e-07,24;UBERON:0002370,4.58e-07,23;UBERON:0000974,4.58e-07,23;UBERON:0004807,4.58e-07,23;UBERON:0005058,4.58e-07,23;UBERON:0003351,4.58e-07,23;UBERON:0009113,4.58e-07,23;UBERON:0003295,4.58e-07,23;UBERON:0009722,4.58e-07,23;UBERON:0005562,4.58e-07,23;UBERON:0007690,4.58e-07,23;UBERON:0007811,8.86e-07,36
|phase1_expression=17.6163731815273,19.1936474201649,20.4749657725291,29.0365642854557,28.0501608769954,16.2842893754533,14.2503710763271,36.0254072401998,27.3130120974233,20.8317428426574,15.7520530767465,18.6666852049087,37.3217591250028,41.6121115514428,20.6528052325711,26.1193094932875,37.7763414189199,34.8585692720853,34.8270661358576,32.2536135366503,20.5804762165589,29.5887034578638,24.8139799681989,9.75953779039781,8.94696196161963,15.5042630311055,8.61523992318149,13.3592164265251,11.2113817479261,12.6015064879965,9.3126814475228,27.9413496322238,28.9080450164748,0,21.6638714813456,13.7974755647549,14.2918549383658,59.8500231953778,34.3787551590472,45.5465657257204,42.940898626264,58.7419117064263,45.6379731849284,11.330713617802,11.7597240214637,15.4179271815813,3.9119567217402,4.79655344036982,5.71184075109627,6.22175677037707,5.31948402176378,0,46.475781877993,46.423177088726,55.1193830593641,12.8629718017974,13.1805382371828,18.5641953219879,10.3181395038395,14.2827564403449,10.775133859605,6.43804610931351,6.22506357277798,20.6976934974722,18.7884608887725,19.1829631035447,11.085204089181,9.98967593836042,15.0349937847293,12.9605700798423,13.8814474491912,7.14127461009509,7.50953039235486,12.1265891222804,12.555756703389,11.9498442259303,11.0115880999389,11.8749224419225,13.5173749265494,10.6827893061457,10.0636407962651,11.4600941522487,9.77140496504833,7.87867654044352,12.2238598221448,10.3120004915784,8.54230084794618,5.96478226640962,11.7375599666435,12.318164297406,25.5080750057476,6.0229671388697,6.79971333707751,10.2543606411185,7.79731700937203,8.96053774194671,14.8871085339657,8.69194645148094,5.45550609666024,7.77347063922748,17.8871143116384,26.9485602570067,7.64415719119937,21.3320010945999,10.3915699685383,9.12095515710355,13.1436355703844,17.3559497172971,9.83963957859253,21.3756680253348,9.02123699183906,9.43842982767638,9.91646638201052,12.2085338847624,22.1066769415125,19.2269884734403,24.472301805703,9.39895819979426,21.230653246797,14.7207833452142,24.0717255121829,18.4252596191384,9.31958806090611,28.1069565131085,54.4561437714983,13.2837668708468,45.8891926857675,24.5960119707297,34.5631017638736,11.9832511523858,12.3525162761029,11.1832373380449,15.9918374576894,20.2015211290961,11.8439185398949,14.4394724130304,18.5347642207576,26.74749868117,24.7668303265001,21.8859530121933,10.4096354370163,10.5754968039398,13.8647839950119,15.5225962370787,26.1940521732612,18.5764894413032,23.9876414872906,14.4873887613849,8.62271971731369,12.8592134514117,10.205165201509,9.86380795924087,15.5706459566335,16.3678518265418,17.0799173218593,14.3304672109315,11.937624184325,18.2717014051448,17.0498099637356,11.5990432619881,9.61556845922494,7.20248245844059,11.6004920436753,9.05115466038058,12.3413690309903,10.4640275137684,9.65784245038629,14.8291984806305,12.0128690436841,11.4917224855367,15.727349051896,12.7193989060039,6.36695334344047,14.4942932261202,17.0334858336943,15.4356918568927,18.1730330641089,11.1069237998689,10.8777007772969,13.9342003116263,14.0465532841082,15.7313149206207,11.1189021922435,10.6526350623033,16.1339880925134,8.39964669092456,14.8287773192159,15.7175612912509,15.9870551437679,19.7740269903929,14.6973873914792,15.1347367673319,11.0007382552787,11.6533482861923,20.2873924211545,11.4044743593376,11.4431967428899,24.4774011417212,21.2474764737504,20.2225902732055,13.815888050041,15.6714398180687,5.63259991465583,17.8524263116221,17.1006325748487,15.5154857545549,22.5174734741238,20.258881419203,19.6061905871693,21.8649064462616,23.3474726556051,13.7280706594041,14.3768206527355,14.5134969590716,12.4815069245824,8.84026072814891,8.7904732625737,8.20153986317724,17.736306255994,12.3169417650815,12.711268162478,10.1847051465113,9.62230017982859,19.9332446355761,21.9000149615133,34.7337893186882,17.6551361398934,20.3747514476873,29.9774965076076,18.3526912481627,17.9592381140531,26.0368305446721,39.2057338242108,16.3171705145613,14.2611639175521,17.1080782708934,8.83028244932856,10.3146284201139,8.36068221421045,14.895784705058,13.566853434899,8.58965237452605,18.7418356027535,19.8344102300618,23.8394581268162,19.5322806244294,17.0020494703456,18.4121190484126,15.4162233399144,19.2792789853084,20.5813123551989,10.8620018237026,26.3876874152793,26.2302495526331,17.2568679841952,8.25454162926937,8.76738315197778,9.6188590675508,11.2214719294694,11.6825356218692,18.8652654012801,17.0860852854428,14.2598951353889,19.9103157499564,6.32511651449993,22.6898195146011,19.0646179222121,9.18311579559682,7.89087971074802,11.1455258216428,15.2512600932355,13.3776613201553,15.9612549984057,16.4411072521884,12.4376005273766,35.5877879051218,15.8780446599573,23.2489616647487,23.2508774442104,22.2554692984895,23.2776070806116,25.1135576609944,16.9058885245313,12.0526446306831,22.7258271461144,15.8917888331681,16.6675074632741,29.9505846637459,30.2094243263466,29.0548279972284,49.6337015582058,43.2449987680103,43.3947917745891,4.77335309007557,13.7606157207794,12.4024874947378,11.7725821495763,11.2907679847813,10.6997656235627,11.4634694427098,22.15112613439,15.4436005770577,16.5907165813495,17.3975007664339,8.45539408026285,17.0448862490136,10.2584264083401,11.8615224889869,13.0451421712508,12.8406655372991,22.2978753426933,22.7857673476913,20.5524315074393,13.5287107662563,14.4015003128933,42.3454901641759,9.52808511863772,13.2497134742627,17.5393111020023,24.3476306107775,33.9745116675963,36.5394166540705,33.6732121958036,39.7807812795702,45.8002907996549,39.0197336479573,47.1696142780402,55.5142326264701,59.8409739169633,20.6324649089842,18.6468200834214,9.86852422704233,13.9344231582185,20.28490737338,18.3928825942158,22.8939530334081,19.2931541171159,22.5707446815914,16.942555278512,11.5081309126794,17.1868654031819,17.1853182343688,13.0165678756422,17.3740596399631,14.1754725048679,16.2115633160719,14.9536994964788,20.192652158321,7.05753963572401,10.3746467084268,10.0732827394939,16.0450433265074,6.91723436672342,7.35374033800057,13.5570503958985,13.3922787205281,9.62757628775446,13.8983466470089,11.9135270948413,12.8265912142532,15.1699242101209,15.8142126440027,15.9096249007049,12.3836359733599,18.425607825232,16.3972837394149,15.2471783297223,12.6591071315582,12.6861623382604,14.0205886865877,11.6833733074187,10.9009812474246,13.8340789210536,10.3229821627845,10.0610385080025,10.5227884575137,11.6791537907441,9.53941861818155,12.2194068667899,13.8891320149544,13.5046244245997,13.3245683419931,18.7119412651707,15.9878769880285,16.8430758080694,20.6276211886366,17.7898148824024,14.559033661888,13.6802023016049
|short_description=p1@Pan3
}}

Revision as of 07:03, 14 September 2013

Short description:p1@Pan3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pan3_5end
Coexpression cluster:MCL_coexpression_mm9:298
Association with transcript: -362bp_to_ENSMUST00000031651, ENSMUST00000085571, NM_028291, uc009aod.2_5end
EntrezGene:Pan3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pan3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I519.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.47
CD326+ enterocyte, pool1.CNhs13542.11848-124I329.04
CD326+ enterocyte, pool2.CNhs13197.11849-124I428.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.28
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.25
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E936.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E727.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E615.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F118.67
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E437.32
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E841.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A326.12
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A537.78
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A234.86
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A434.83
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A632.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H229.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.95
GP2+ M cell, pool1.CNhs13228.11845-124H915.50
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I213.36
Ileum epithelium, pool1.CNhs13199.10252-104B911.21
Ileum epithelium, pool2.CNhs13232.10253-104C112.60
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I327.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G628.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.66
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.80
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G859.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H134.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H345.55
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G942.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H258.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H445.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A246.48
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I946.42
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A155.12
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.18
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.56
Mouse Granule cells, donor1.CNhs12131.11713-123C310.32
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C720.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E718.79
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.18
Mouse Microglia, donor1.CNhs12629.11718-123C811.09
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.96
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.88
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.13
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D911.74
Mouse Schwann, donor2.CNhs12573.11746-123F912.32
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G325.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.96
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H126.95
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.36
accessory axillary lymph node, adult.CNhs10475.1063-29H99.84
adrenal gland, adult.CNhs10508.49-24D721.38
adrenal gland, embryo E14.CNhs11038.406-44C59.02
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I19.92
adrenal gland, embryo E18.CNhs11026.1262-18F512.21
adrenal gland, neonate N00.CNhs11191.1311-23C122.11
adrenal gland, neonate N25.CNhs11223.1377-27I319.23
amnion, adult pregnant day17.5.CNhs10488.583-22A824.47
aorta, adult.CNhs10498.46-23H19.40
bone (os femoris), adult.CNhs10483.56-12G221.23
bone (os femoris), neonate N02.CNhs11227.1985-43F514.72
bone (os femoris), neonate N16.CNhs11225.1525-43A624.07
bone (os femoris), neonate N20.CNhs11195.1350-25C318.43
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B228.11
cerebellum, neonate N30.CNhs11135.1395-42I254.46
colon, adult.CNhs10468.36-18H713.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C745.89
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D124.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D434.56
corpora quadrigemina, adult.CNhs10501.16-22A411.98
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F111.18
cortex, adult.CNhs10473.12-14D515.99
cortex, neonate N30.CNhs11107.1392-42F220.20
diencephalon, adult.CNhs10482.20-12F211.84
diencephalon, neonate N30.CNhs11201.1388-42B214.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A226.75
epididymis, adult.CNhs10490.58-23B224.77
eyeball, adult.CNhs10484.31-12G421.89
eyeball, embryo E12.CNhs11016.345-16C610.41
eyeball, embryo E14.CNhs10521.399-16E210.58
eyeball, embryo E15.CNhs10593.426-16C913.86
eyeball, embryo E17.CNhs11023.1261-18D415.52
eyeball, neonate N00.CNhs11207.633-15C626.19
eyeball, neonate N01.CNhs11140.1532-43E718.58
eyeball, neonate N02.CNhs11205.1551-44G823.99
eyeball, neonate N16.CNhs11188.777-19A214.49
forelimb, embryo E11.CNhs10596.335-25E28.62
forelimb, embryo E12.CNhs10600.359-14H212.86
forelimb, embryo E13.CNhs10589.384-1E210.21
forelimb, embryo E14.CNhs10577.413-26A89.86
forelimb, embryo E15.CNhs11007.437-20E715.57
forelimb, embryo E17.CNhs10598.1517-43C416.37
forelimb, embryo E18.CNhs11008.1520-43B517.08
gonad, embryo E13.CNhs11044.1564-45I614.33
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D218.27
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.05
heart, embryo E11.CNhs10586.331-24E911.60
heart, embryo E12.CNhs11015.353-12F59.62
heart, embryo E13.CNhs11013.376-3I97.20
heart, embryo E14.CNhs10597.403-26D411.60
heart, embryo E15.CNhs11017.431-16C89.05
heart, embryo E16.CNhs11021.457-17C612.34
heart, embryo E17.CNhs11025.479-18E510.46
heart, embryo E18.CNhs11030.1283-20G39.66
heart, neonate N00.CNhs11213.639-21E314.83
heart, neonate N03.CNhs11221.1349-25I212.01
heart, neonate N10.CNhs11118.749-24G111.49
heart, neonate N16.CNhs11209.782-15G115.73
heart, neonate N20.CNhs11127.821-26I612.72
heart, neonate N25.CNhs11196.1351-25D36.37
heart, neonate N30.CNhs11202.1390-42D214.49
hippocampus, adult.CNhs10478.13-16E817.03
hippocampus, neonate N00.CNhs11228.627-43G115.44
intestinal mucosa, adult.CNhs10506.860-29I318.17
intestine, adult.CNhs10496.178-9A311.11
intestine, embryo E12.CNhs11019.1251-16I510.88
intestine, embryo E13.CNhs11010.381-16D513.93
intestine, embryo E15.CNhs10602.976-16D814.05
intestine, embryo E16.CNhs10585.463-22H415.73
intestine, embryo E17.CNhs10582.482-18D311.12
intestine, embryo E18.CNhs10526.1289-20F710.65
intestine, neonate N00.CNhs11126.644-26D116.13
intestine, neonate N01.CNhs11192.1322-23E98.40
intestine, neonate N06.CNhs11102.688-20B814.83
intestine, neonate N07.CNhs11095.720-20F215.72
intestine, neonate N10.CNhs11098.755-23A515.99
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E314.70
intestine, neonate N30.CNhs11131.1384-42G115.13
kidney, embryo E14.CNhs10606.411-4I911.00
kidney, embryo E15.CNhs10997.434-16F811.65
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I211.40
kidney, embryo E18.CNhs11001.1288-20C711.44
kidney, neonate N00.CNhs11214.646-21G724.48
kidney, neonate N10.CNhs11206.758-6D521.25
kidney, neonate N20.CNhs11113.832-19I120.22
kidney, neonate N25.CNhs11122.1353-25F313.82
kidney, neonate N30.CNhs11203.1385-42H115.67
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F817.85
liver, embryo E13.CNhs10524.378-3H617.10
liver, embryo E14.CNhs10594.409-16E115.52
liver, embryo E15.CNhs10520.433-16D722.52
liver, embryo E16.CNhs10523.462-17F520.26
liver, embryo E17.CNhs10510.481-18A319.61
liver, embryo E18.CNhs10579.499-43G421.86
liver, neonate N00.CNhs11117.641-24F423.35
liver, neonate N03.CNhs11123.1345-25G213.73
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H214.51
liver, neonate N10.CNhs11115.751-24B912.48
liver, neonate N20.CNhs11220.823-25A38.84
liver, neonate N25.CNhs11198.1368-26H18.79
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B117.74
lung, embryo E12.CNhs10522.354-16G212.32
lung, embryo E14.CNhs10604.404-26F812.71
lung, embryo E15.CNhs11020.432-17C510.18
lung, embryo E16.CNhs10998.458-17B69.62
lung, embryo E17.CNhs10605.480-44A619.93
lung, embryo E18.CNhs10583.1287-20I621.90
lung, neonate N00.CNhs11224.640-42C634.73
lung, neonate N06.CNhs11212.683-20E517.66
lung, neonate N07.CNhs11111.715-19A320.37
lung, neonate N10.CNhs11219.750-23E629.98
lung, neonate N20.CNhs11109.822-18A418.35
lung, neonate N25.CNhs11119.1359-25C717.96
lung, neonate N30.CNhs11133.1394-42H226.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A139.21
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.32
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H217.11
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A310.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.36
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.90
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D719.83
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.84
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D518.41
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.42
olfactory brain, adult.CNhs10489.18-22I919.28
ovary, adult.CNhs10507.91-2I720.58
ovary, embryo E18.CNhs11040.505-44H710.86
ovary, neonate N00.CNhs11217.1299-22I426.39
oviduct, adult pregnant day01.CNhs10500.988-6G626.23
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E59.62
pancreas, embryo E17.CNhs10599.1558-45G311.22
pancreas, embryo E18.CNhs10580.1535-43I711.68
pancreas, neonate N00.CNhs11105.645-26G918.87
pancreas, neonate N01.CNhs11138.1531-43D717.09
pancreas, neonate N02.CNhs11139.1539-43D814.26
pancreas, neonate N16.CNhs11136.787-43B619.91
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H522.69
pituitary gland, adult.CNhs10493.21-1G819.06
pituitary gland, embryo E12.CNhs11018.346-16E69.18
pituitary gland, embryo E13.CNhs11009.370-44C77.89
pituitary gland, embryo E14.CNhs11037.398-44A511.15
pituitary gland, embryo E15.CNhs10592.427-16B915.25
pituitary gland, embryo E16.CNhs11036.449-43F613.38
pituitary gland, embryo E17.CNhs11039.1265-44F515.96
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I712.44
placenta, adult pregnant day17.CNhs10464.577-18G335.59
prostate, adult.CNhs10470.859-1F815.88
skin, adult.CNhs10492.30-1C323.25
skin, neonate N00.CNhs11124.650-25G423.25
skin, neonate N03.CNhs11215.662-22H322.26
skin, neonate N06.CNhs11097.693-20I523.28
skin, neonate N10.CNhs11108.762-6C425.11
small intestine, neonate N16.CNhs11114.790-21I116.91
spinal cord, adult.CNhs10505.24-13C912.05
spleen, adult.CNhs10465.25-2G222.73
spleen, embryo E16.CNhs11035.461-43C115.89
spleen, embryo E18.CNhs11011.1271-21F216.67
spleen, neonate N10.CNhs11116.752-24D129.95
spleen, neonate N20.CNhs11112.824-19H130.21
spleen, neonate N25.CNhs11099.1354-25G329.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C649.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C943.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D343.39
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E313.76
stomach, embryo E15.CNhs10603.1252-16G812.40
stomach, embryo E16.CNhs11022.459-17D411.77
stomach, embryo E17.CNhs11006.1035-18D511.29
stomach, embryo E18.CNhs10999.1286-20C610.70
stomach, neonate N03.CNhs11193.1340-24B811.46
stomach, neonate N07.CNhs11210.718-18A922.15
stomach, neonate N25.CNhs11104.1355-25E415.44
stomach, neonate N30.CNhs11134.1386-42I116.59
submandibular gland, adult.CNhs10469.59-29C117.40
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F517.04
testis, embryo E15.CNhs11034.443-27C510.26
testis, embryo E16.CNhs11033.470-26G511.86
testis, embryo E17.CNhs11029.486-18I513.05
testis, embryo E18.CNhs11027.503-18G512.84
testis, neonate N00.CNhs11189.1300-22B722.30
testis, neonate N07.CNhs11222.726-26I422.79
testis, neonate N10.CNhs11204.763-44D920.55
testis, neonate N20.CNhs11110.839-18H313.53
testis, neonate N30.CNhs11130.1391-42E214.40
thymus, adult.CNhs10471.38-12B542.35
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I213.25
thymus, embryo E16.CNhs11002.456-26C517.54
thymus, embryo E17.CNhs10581.478-18C124.35
thymus, embryo E18.CNhs10595.1273-19G433.97
thymus, neonate N02.CNhs11181.1541-43F836.54
thymus, neonate N03.CNhs11137.2104-43C733.67
thymus, neonate N06.CNhs11197.681-26C439.78
thymus, neonate N07.CNhs11211.713-19D345.80
thymus, neonate N10.CNhs11194.748-24E439.02
thymus, neonate N20.CNhs11186.820-7A247.17
thymus, neonate N25.CNhs11125.1362-25G755.51
thymus, neonate N30.CNhs11132.1393-42G259.84
tongue, adult.CNhs10499.32-1B420.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H318.65
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.93
urinary bladder, adult.CNhs10481.879-12E420.28
uterus, adult pregnant day19.CNhs10497.590-15F518.39
uterus, adult.CNhs10509.92-27E522.89
vagina, adult.CNhs10502.89-27D519.29
vesicular gland, adult.CNhs10491.51-27F822.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.19
whole body, embryo E11.CNhs11014.324-5I87.06
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H210.07
whole body, embryo E14.5.CNhs10578.420-27D216.05
whole body, embryo E14.CNhs10519.395-14B16.92
whole body, embryo E16.CNhs10514.453-14F27.35
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.17
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.81
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.91
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.66
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.06
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.32
whole body, embryo E17.5.CNhs10513.490-9F918.71
whole body, embryo E17.CNhs10517.475-3I515.99
whole body, embryo E18.CNhs10516.493-3B316.84
whole body, neonate N00.CNhs10525.657-19C220.63
whole body, neonate N01.CNhs10576.659-23C617.79
whole body, neonate N06.CNhs10515.692-21D114.56
whole body, neonate N10.CNhs10518.761-6B413.68





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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