FFCP PHASE1:Mm9::chr5:97168231..97168241,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:97168231..97168241,-|id=chr5:97168231..97168241,-|ontology_enrichment_celltype=CL:0000181!1.11e-13!5;CL:0000417!1.11e-13!5;CL:0000668!1.11e-13!5;CL:0000412!1.11e-13!5;CL:0000182!1.11e-13!5|ontology_enrichment_celltype_v019_2=CL:0000182,5.37e-15,5;CL:0000057,3.65e-09,1;CL:0000632,3.65e-09,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.24e-30!22;UBERON:0007499!2.24e-30!22;UBERON:0006925!2.24e-30!22;UBERON:0009497!2.24e-30!22;UBERON:0000015!2.24e-30!22;UBERON:0002423!2.24e-30!22;UBERON:0006235!2.24e-30!22;UBERON:0008835!2.24e-30!22;UBERON:0003894!2.24e-30!22;UBERON:0004161!2.24e-30!22;UBERON:0008836!2.24e-30!22;UBERON:0009854!5.85e-29!23;UBERON:0009856!5.85e-29!23;UBERON:0002365!1.83e-26!25;UBERON:0002330!1.83e-26!25;UBERON:0005172!2.20e-14!49;UBERON:0005173!2.20e-14!49;UBERON:0002417!2.20e-14!49;UBERON:0000916!2.20e-14!49;UBERON:0003914!5.21e-13!47;UBERON:0005256!5.21e-13!47;UBERON:0005057!8.29e-12!51;UBERON:0003929!8.84e-11!55;UBERON:0009569!4.93e-10!66;UBERON:0002368!1.09e-09!60;UBERON:0000949!4.70e-09!72;UBERON:0002530!9.18e-09!65;UBERON:0004921!1.12e-08!126;UBERON:0004185!1.12e-08!126;UBERON:0000490!1.35e-08!66;UBERON:0001007!1.72e-08!128;UBERON:0001555!1.72e-08!128;UBERON:0007026!1.72e-08!128;UBERON:0005177!1.82e-08!85;UBERON:0004119!2.61e-08!130;UBERON:0000925!2.61e-08!130;UBERON:0006595!2.61e-08!130;UBERON:0005911!4.04e-08!69;UBERON:0000466!4.99e-08!79;UBERON:0002405!5.69e-08!70;UBERON:0001041!1.24e-07!92;UBERON:0000077!4.22e-07!97;UBERON:0002100!5.53e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.91e-43,22;UBERON:0007499,3.91e-43,22;UBERON:0006925,3.91e-43,22;UBERON:0009497,3.91e-43,22;UBERON:0000015,3.91e-43,22;UBERON:0002423,3.91e-43,22;UBERON:0006235,3.91e-43,22;UBERON:0008835,3.91e-43,22;UBERON:0003894,3.91e-43,22;UBERON:0004161,3.91e-43,22;UBERON:0008836,3.91e-43,22;UBERON:0009854,3.06e-41,23;UBERON:0009856,3.06e-41,23;UBERON:0002365,6.60e-38,25;UBERON:0002330,6.60e-38,25;UBERON:0005256,7.95e-21,45;UBERON:0003914,6.49e-20,47;UBERON:0005172,4.47e-19,49;UBERON:0005173,4.47e-19,49;UBERON:0002417,4.47e-19,49;UBERON:0000916,4.47e-19,49;UBERON:0003929,6.31e-17,55;UBERON:0002368,1.84e-15,60;UBERON:0003104,3.39e-15,61;UBERON:0009142,3.39e-15,61;UBERON:0002530,3.22e-14,65;UBERON:0000490,5.41e-14,66;UBERON:0009569,5.41e-14,66;UBERON:0005911,2.36e-13,69;UBERON:0000949,9.10e-13,72;UBERON:0005177,1.43e-11,79;UBERON:0001041,2.04e-11,80;UBERON:0002100,4.62e-10,90;UBERON:0000025,9.12e-08,114;UBERON:0004921,9.12e-08,114;UBERON:0001007,1.29e-07,116;UBERON:0001555,1.29e-07,116;UBERON:0007026,1.29e-07,116;UBERON:0004119,1.79e-07,118;UBERON:0000925,1.79e-07,118;UBERON:0006595,1.79e-07,118;UBERON:0004111,3.37e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,2.58127163094416,1.3599426674155,0,5.19821133958135,4.92829575807069,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0.156998727841375,0,7.11486305009157,0,0,0,0,0,0,0,0,0.274561413188081,2.87536413054709,1.48856379067401,2.18426371180192,5.05157755894223,5.38192240565737,4.3419916922703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:97168231..97168241,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:97168231..97168241,- | |||
|id=chr5:97168231..97168241,- | |||
|ontology_enrichment_celltype=CL:0000181!1.11e-13!5;CL:0000417!1.11e-13!5;CL:0000668!1.11e-13!5;CL:0000412!1.11e-13!5;CL:0000182!1.11e-13!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.37e-15,5;CL:0000057,3.65e-09,1;CL:0000632,3.65e-09,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.24e-30!22;UBERON:0007499!2.24e-30!22;UBERON:0006925!2.24e-30!22;UBERON:0009497!2.24e-30!22;UBERON:0000015!2.24e-30!22;UBERON:0002423!2.24e-30!22;UBERON:0006235!2.24e-30!22;UBERON:0008835!2.24e-30!22;UBERON:0003894!2.24e-30!22;UBERON:0004161!2.24e-30!22;UBERON:0008836!2.24e-30!22;UBERON:0009854!5.85e-29!23;UBERON:0009856!5.85e-29!23;UBERON:0002365!1.83e-26!25;UBERON:0002330!1.83e-26!25;UBERON:0005172!2.20e-14!49;UBERON:0005173!2.20e-14!49;UBERON:0002417!2.20e-14!49;UBERON:0000916!2.20e-14!49;UBERON:0003914!5.21e-13!47;UBERON:0005256!5.21e-13!47;UBERON:0005057!8.29e-12!51;UBERON:0003929!8.84e-11!55;UBERON:0009569!4.93e-10!66;UBERON:0002368!1.09e-09!60;UBERON:0000949!4.70e-09!72;UBERON:0002530!9.18e-09!65;UBERON:0004921!1.12e-08!126;UBERON:0004185!1.12e-08!126;UBERON:0000490!1.35e-08!66;UBERON:0001007!1.72e-08!128;UBERON:0001555!1.72e-08!128;UBERON:0007026!1.72e-08!128;UBERON:0005177!1.82e-08!85;UBERON:0004119!2.61e-08!130;UBERON:0000925!2.61e-08!130;UBERON:0006595!2.61e-08!130;UBERON:0005911!4.04e-08!69;UBERON:0000466!4.99e-08!79;UBERON:0002405!5.69e-08!70;UBERON:0001041!1.24e-07!92;UBERON:0000077!4.22e-07!97;UBERON:0002100!5.53e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.91e-43,22;UBERON:0007499,3.91e-43,22;UBERON:0006925,3.91e-43,22;UBERON:0009497,3.91e-43,22;UBERON:0000015,3.91e-43,22;UBERON:0002423,3.91e-43,22;UBERON:0006235,3.91e-43,22;UBERON:0008835,3.91e-43,22;UBERON:0003894,3.91e-43,22;UBERON:0004161,3.91e-43,22;UBERON:0008836,3.91e-43,22;UBERON:0009854,3.06e-41,23;UBERON:0009856,3.06e-41,23;UBERON:0002365,6.60e-38,25;UBERON:0002330,6.60e-38,25;UBERON:0005256,7.95e-21,45;UBERON:0003914,6.49e-20,47;UBERON:0005172,4.47e-19,49;UBERON:0005173,4.47e-19,49;UBERON:0002417,4.47e-19,49;UBERON:0000916,4.47e-19,49;UBERON:0003929,6.31e-17,55;UBERON:0002368,1.84e-15,60;UBERON:0003104,3.39e-15,61;UBERON:0009142,3.39e-15,61;UBERON:0002530,3.22e-14,65;UBERON:0000490,5.41e-14,66;UBERON:0009569,5.41e-14,66;UBERON:0005911,2.36e-13,69;UBERON:0000949,9.10e-13,72;UBERON:0005177,1.43e-11,79;UBERON:0001041,2.04e-11,80;UBERON:0002100,4.62e-10,90;UBERON:0000025,9.12e-08,114;UBERON:0004921,9.12e-08,114;UBERON:0001007,1.29e-07,116;UBERON:0001555,1.29e-07,116;UBERON:0007026,1.29e-07,116;UBERON:0004119,1.79e-07,118;UBERON:0000925,1.79e-07,118;UBERON:0006595,1.79e-07,118;UBERON:0004111,3.37e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,2.58127163094416,1.3599426674155,0,5.19821133958135,4.92829575807069,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0.156998727841375,0,7.11486305009157,0,0,0,0,0,0,0,0,0.274561413188081,2.87536413054709,1.48856379067401,2.18426371180192,5.05157755894223,5.38192240565737,4.3419916922703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:97168231..97168241,- | |||
}} |
Revision as of 08:23, 14 September 2013
Short description: | p@chr5:97168231..97168241, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:97168231..97168241, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.37e-15 | 5 |
fibroblast | 3.65e-09 | 1 |
hepatic stellate cell | 3.65e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.