FFCP PHASE1:Mm9::chr6:52154314..52154337,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1096|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:52154314..52154337,-|id=chr6:52154314..52154337,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,4.17e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!2.74e-14!27;UBERON:0005178!5.40e-13!17;UBERON:0005181!5.40e-13!17;UBERON:0002224!5.40e-13!17;UBERON:0000915!5.40e-13!17;UBERON:0008947!5.40e-13!17;UBERON:0003258!5.40e-13!17;UBERON:0002048!1.52e-12!14;UBERON:0000117!1.52e-12!14;UBERON:0000171!1.52e-12!14;UBERON:0000170!1.52e-12!14;UBERON:0005597!1.52e-12!14;UBERON:0000118!1.52e-12!14;UBERON:0005153!2.96e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0005157,2.20e-29,20;UBERON:0002048,1.23e-26,14;UBERON:0000117,1.23e-26,14;UBERON:0000171,1.23e-26,14;UBERON:0000170,1.23e-26,14;UBERON:0005597,1.23e-26,14;UBERON:0000118,1.23e-26,14;UBERON:0005153,1.72e-21,17;UBERON:0005178,1.72e-21,17;UBERON:0005181,1.72e-21,17;UBERON:0002224,1.72e-21,17;UBERON:0000915,1.72e-21,17;UBERON:0008947,1.72e-21,17;UBERON:0003258,1.72e-21,17;UBERON:0000310,1.91e-12,6;UBERON:0001443,1.91e-12,6;UBERON:0010313,3.40e-10,3;UBERON:0002342,3.40e-10,3;UBERON:0002005,3.40e-10,3;UBERON:0005428,3.40e-10,3;UBERON:0005062,3.40e-10,3;UBERON:0002410,4.17e-08,9;UBERON:0000065,1.82e-07,41;UBERON:0009569,1.93e-07,66;UBERON:0001004,3.12e-07,42|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0,2.0190142737785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0,0,5.2175607966302,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0.258937883647172,1.48442139064825,2.08182392119363,0,0.230615497256059,0.452167921657868,1.52865319276416,0.628332956648377,0,3.32578520915797,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0.264450566663544,0.853153002140936,1.16118335930219,2.44848176511977,1.21010114774006,0.667134131534611,1.52180500890047,0,1.4822905925161,1.25667604400135,0.795825888164603,0.58489226135736,0,0,0,0.569003702859245,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.923765950833023,5.87423376488503,5.0519142697028,2.71592137240301,2.11221223459652,3.35012514883632,2.85652369063216,1.95133647857799,1.57635144106191,1.55025282754142,1.75400245523236,1.47476983244164,0.863424909329478,1.15719246865209,0,0,0,0,2.0871576698413,0.703270119553219,0.327869890753351,0,21.7700671397217,17.9601822376454,16.8030250231583,0,0,0.283076530788832,0.809621403349789,1.16902343164525,3.16230222357219,0,0.141940085208269,0.534196811001766,0.81443479676788,0.329940245945071,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0.775284879504663,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,0,0,0.412773735926445,0,0,0,0.228778173206523,0.169978429993855,0.419854356970974,0,0,2.05618395827738,0.609958401380546,0.216010681643603,0,0.655087691238533,0.944050424693745,0.578574190077352,0.26175594198403,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0.201932899896295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0.853668028770671,0.243106717068294,0.838452650511929,0.183843508450014,0,0,0.64183841918363,0.505394423527595,0.50695859978048,0.754505365544305,0.655490552289177,0.576226371643824,0.402048282689293,0.476293691283074,1.0429589335037,0.77163688185482,0.824171801606613,0.735994600671987,0,0.177475806159338,0,0.581385666529314,0.658765662907314,0.423073039458382,0.365855945745545,0,0.543216455383447,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.192906610981141,0.999242311751784,0.467863216890817,1.28922632428979,0,0.441182838239031,0|short_description=p@chr6:52154314..52154337,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1096 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:52154314..52154337,- | |||
|id=chr6:52154314..52154337,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.17e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!2.74e-14!27;UBERON:0005178!5.40e-13!17;UBERON:0005181!5.40e-13!17;UBERON:0002224!5.40e-13!17;UBERON:0000915!5.40e-13!17;UBERON:0008947!5.40e-13!17;UBERON:0003258!5.40e-13!17;UBERON:0002048!1.52e-12!14;UBERON:0000117!1.52e-12!14;UBERON:0000171!1.52e-12!14;UBERON:0000170!1.52e-12!14;UBERON:0005597!1.52e-12!14;UBERON:0000118!1.52e-12!14;UBERON:0005153!2.96e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005157,2.20e-29,20;UBERON:0002048,1.23e-26,14;UBERON:0000117,1.23e-26,14;UBERON:0000171,1.23e-26,14;UBERON:0000170,1.23e-26,14;UBERON:0005597,1.23e-26,14;UBERON:0000118,1.23e-26,14;UBERON:0005153,1.72e-21,17;UBERON:0005178,1.72e-21,17;UBERON:0005181,1.72e-21,17;UBERON:0002224,1.72e-21,17;UBERON:0000915,1.72e-21,17;UBERON:0008947,1.72e-21,17;UBERON:0003258,1.72e-21,17;UBERON:0000310,1.91e-12,6;UBERON:0001443,1.91e-12,6;UBERON:0010313,3.40e-10,3;UBERON:0002342,3.40e-10,3;UBERON:0002005,3.40e-10,3;UBERON:0005428,3.40e-10,3;UBERON:0005062,3.40e-10,3;UBERON:0002410,4.17e-08,9;UBERON:0000065,1.82e-07,41;UBERON:0009569,1.93e-07,66;UBERON:0001004,3.12e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0,2.0190142737785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0,0,5.2175607966302,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0.258937883647172,1.48442139064825,2.08182392119363,0,0.230615497256059,0.452167921657868,1.52865319276416,0.628332956648377,0,3.32578520915797,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0.264450566663544,0.853153002140936,1.16118335930219,2.44848176511977,1.21010114774006,0.667134131534611,1.52180500890047,0,1.4822905925161,1.25667604400135,0.795825888164603,0.58489226135736,0,0,0,0.569003702859245,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.923765950833023,5.87423376488503,5.0519142697028,2.71592137240301,2.11221223459652,3.35012514883632,2.85652369063216,1.95133647857799,1.57635144106191,1.55025282754142,1.75400245523236,1.47476983244164,0.863424909329478,1.15719246865209,0,0,0,0,2.0871576698413,0.703270119553219,0.327869890753351,0,21.7700671397217,17.9601822376454,16.8030250231583,0,0,0.283076530788832,0.809621403349789,1.16902343164525,3.16230222357219,0,0.141940085208269,0.534196811001766,0.81443479676788,0.329940245945071,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0.775284879504663,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,0,0,0.412773735926445,0,0,0,0.228778173206523,0.169978429993855,0.419854356970974,0,0,2.05618395827738,0.609958401380546,0.216010681643603,0,0.655087691238533,0.944050424693745,0.578574190077352,0.26175594198403,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0.201932899896295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0.853668028770671,0.243106717068294,0.838452650511929,0.183843508450014,0,0,0.64183841918363,0.505394423527595,0.50695859978048,0.754505365544305,0.655490552289177,0.576226371643824,0.402048282689293,0.476293691283074,1.0429589335037,0.77163688185482,0.824171801606613,0.735994600671987,0,0.177475806159338,0,0.581385666529314,0.658765662907314,0.423073039458382,0.365855945745545,0,0.543216455383447,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.192906610981141,0.999242311751784,0.467863216890817,1.28922632428979,0,0.441182838239031,0 | |||
|short_description=p@chr6:52154314..52154337,- | |||
}} |
Revision as of 10:16, 14 September 2013
Short description: | p@chr6:52154314..52154337, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:52154314..52154337, - |
Coexpression cluster: | MCL_coexpression_mm9:1096 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.17e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelial fold | 2.20e-29 | 20 |
lung | 1.23e-26 | 14 |
respiratory tube | 1.23e-26 | 14 |
respiration organ | 1.23e-26 | 14 |
pair of lungs | 1.23e-26 | 14 |
lung primordium | 1.23e-26 | 14 |
lung bud | 1.23e-26 | 14 |
epithelial bud | 1.72e-21 | 17 |
thoracic cavity element | 1.72e-21 | 17 |
thoracic segment organ | 1.72e-21 | 17 |
thoracic cavity | 1.72e-21 | 17 |
thoracic segment of trunk | 1.72e-21 | 17 |
respiratory primordium | 1.72e-21 | 17 |
endoderm of foregut | 1.72e-21 | 17 |
breast | 1.91e-12 | 6 |
chest | 1.91e-12 | 6 |
neural crest-derived structure | 3.40e-10 | 3 |
neural crest | 3.40e-10 | 3 |
enteric nervous system | 3.40e-10 | 3 |
vagal neural crest | 3.40e-10 | 3 |
neural fold | 3.40e-10 | 3 |
autonomic nervous system | 4.17e-08 | 9 |
respiratory tract | 1.82e-07 | 41 |
subdivision of trunk | 1.93e-07 | 66 |
respiratory system | 3.12e-07 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.