FFCP PHASE1:Mm9::chr6:53771218..53771253,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66873|HGNC=|MCL_coexpression_id=1206|UniProt=Q9DBY4|association_with_transcript=-399bp_to_ENSMUST00000127748,NM_025817,uc009bzk.2_5end|description=CAGE_peak_10_at_Tril_5end|id=chr6:53771218..53771253,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,2.55e-11,9;CL:0000393,1.16e-07,39;CL:0000211,1.16e-07,39;CL:0000540,6.90e-07,33;CL:0000047,6.90e-07,33;CL:0000031,6.90e-07,33;CL:0000404,6.90e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!1.10e-10!21;UBERON:0004121!1.09e-07!102;UBERON:0000924!1.09e-07!102;UBERON:0006601!1.09e-07!102;UBERON:0001017!1.51e-07!73;UBERON:0005743!1.51e-07!73;UBERON:0000073!2.25e-07!75;UBERON:0001016!2.25e-07!75;UBERON:0002113!3.52e-07!14;UBERON:0003918!3.52e-07!14;UBERON:0005095!3.52e-07!14;UBERON:0007687!3.52e-07!14;UBERON:0000991!8.68e-07!18;UBERON:0005564!8.68e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.55e-11,9;UBERON:0000489,6.13e-11,21;UBERON:0000991,3.64e-09,18;UBERON:0005564,3.64e-09,18;UBERON:0000010,7.34e-09,11;UBERON:0003076,1.54e-08,12;UBERON:0003057,1.54e-08,12;UBERON:0001017,1.99e-08,73;UBERON:0004176,4.44e-08,17;UBERON:0009196,4.44e-08,17;UBERON:0009117,4.44e-08,17;UBERON:0001016,5.39e-08,75;UBERON:0002113,5.50e-07,14;UBERON:0003918,5.50e-07,14;UBERON:0011143,5.50e-07,14;UBERON:0005095,5.50e-07,14;UBERON:0007687,5.50e-07,14|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0.219686182734472,0.194429899074283,0.279972843250725,2.87505128729943,0,0,0,3.08711323243136,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,0,0.898800331555214,3.84218305321555,0,0,0,4.85606673486466,3.53389665522582,0,0.0958454710182364,0,0,0.638436690425939,1.99688493233117,0,0.365950574409639,0,1.95428099300967,0.56276261003168,1.5279824777681,2.94628585473668,2.42031857358475,0.372798891650601,0,0.529000920747499,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,1.90833859442749,0.608930956624282,2.07553947530453,1.05505848386836,1.29347577849275,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0,0,0,2.04946557908083,1.8850203613211,0,0,0,0,1.49790639404823,1.37250180845588,0.376963056338593,0.869121600961382,1.27857728665165,1.24672826735736,1.29793010454206,3.1570202793598,0.373220911830279,0.252722758433675,0.420883711772948,0.390361328888111,0,0.360124259610698,0.30140963567143,0.0680364991513279,0,0,0.258703370739016,0.215567992932842,1.51284864134255,2.46331573829528,1.31517439456545,1.11218899690239,0,1.02891068203972,3.58261680273288,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0,0,0,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0,0.268412837520744,1.89260953707715,0.411618449517138,0,0.264450566663544,0.426576501070468,0.696710015581316,0.77320476793256,0.403367049246685,0.667134131534611,0.570676878337677,0,0.164698954724011,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.199141273254367,5.31070122668629,2.85621281524322,3.38123207019241,2.64746726198909,4.07300223052014,2.59502533594179,3.16182685621286,1.32849133181642,0.784993639206874,0.863780147452604,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,2.08440552947533,3.42226450528254,2.54617628662782,1.40814148973101,1.84256883185997,1.42826184531608,0.780534591431195,0.472905432318573,1.32878813789265,0.637819074629948,0.327726629431476,0.172684981865896,1.44649058581512,0,0,0,0,2.88991061978026,3.5163505977661,0,0.504941854408746,3.47059041357882,2.73307121007647,1.29254038639679,2.38968797952552,2.22798674082394,1.69845918473299,8.09621403349789,2.33804686329049,4.34816555741176,0,2.2710413633323,3.5613120733451,2.28041743095006,0.494910368917606,1.32745138339963,0.728341908464944,0,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0,0,0,0,0.340439605753788,0,0.388076051348264,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.358117032009409,0,0,4.45020724825223,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0.621339313086926,0,4.03694674318743,1.98550188548517,6.61134040369762,3.09983576346555,2.53434188236167,3.75543163666413,1.3020438484395,0.314578033277133,0,0.576060012515731,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0.228620419965,0,0,0,0.116876902181569,0.453460767230423,0,0,0,0.965947970160952,0.563047426353546,0.183151624267265,0,0.501572104035363,0.564751842617067,0.920650473014354,1.14579102687879,1.20297227640581,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.341467211508268,1.21553358534147,0,0.735374033800057,0.44449345560323,0.2060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| ||
|EntrezGene=66873 | |||
|HGNC= | |||
|MCL_coexpression_id=1206 | |||
|UniProt=Q9DBY4 | |||
|association_with_transcript=-399bp_to_ENSMUST00000127748,NM_025817,uc009bzk.2_5end | |||
|description=CAGE_peak_10_at_Tril_5end | |||
|id=chr6:53771218..53771253,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.55e-11,9;CL:0000393,1.16e-07,39;CL:0000211,1.16e-07,39;CL:0000540,6.90e-07,33;CL:0000047,6.90e-07,33;CL:0000031,6.90e-07,33;CL:0000404,6.90e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.10e-10!21;UBERON:0004121!1.09e-07!102;UBERON:0000924!1.09e-07!102;UBERON:0006601!1.09e-07!102;UBERON:0001017!1.51e-07!73;UBERON:0005743!1.51e-07!73;UBERON:0000073!2.25e-07!75;UBERON:0001016!2.25e-07!75;UBERON:0002113!3.52e-07!14;UBERON:0003918!3.52e-07!14;UBERON:0005095!3.52e-07!14;UBERON:0007687!3.52e-07!14;UBERON:0000991!8.68e-07!18;UBERON:0005564!8.68e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.55e-11,9;UBERON:0000489,6.13e-11,21;UBERON:0000991,3.64e-09,18;UBERON:0005564,3.64e-09,18;UBERON:0000010,7.34e-09,11;UBERON:0003076,1.54e-08,12;UBERON:0003057,1.54e-08,12;UBERON:0001017,1.99e-08,73;UBERON:0004176,4.44e-08,17;UBERON:0009196,4.44e-08,17;UBERON:0009117,4.44e-08,17;UBERON:0001016,5.39e-08,75;UBERON:0002113,5.50e-07,14;UBERON:0003918,5.50e-07,14;UBERON:0011143,5.50e-07,14;UBERON:0005095,5.50e-07,14;UBERON:0007687,5.50e-07,14 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0.219686182734472,0.194429899074283,0.279972843250725,2.87505128729943,0,0,0,3.08711323243136,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,0,0.898800331555214,3.84218305321555,0,0,0,4.85606673486466,3.53389665522582,0,0.0958454710182364,0,0,0.638436690425939,1.99688493233117,0,0.365950574409639,0,1.95428099300967,0.56276261003168,1.5279824777681,2.94628585473668,2.42031857358475,0.372798891650601,0,0.529000920747499,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,1.90833859442749,0.608930956624282,2.07553947530453,1.05505848386836,1.29347577849275,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0,0,0,2.04946557908083,1.8850203613211,0,0,0,0,1.49790639404823,1.37250180845588,0.376963056338593,0.869121600961382,1.27857728665165,1.24672826735736,1.29793010454206,3.1570202793598,0.373220911830279,0.252722758433675,0.420883711772948,0.390361328888111,0,0.360124259610698,0.30140963567143,0.0680364991513279,0,0,0.258703370739016,0.215567992932842,1.51284864134255,2.46331573829528,1.31517439456545,1.11218899690239,0,1.02891068203972,3.58261680273288,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0,0,0,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0,0.268412837520744,1.89260953707715,0.411618449517138,0,0.264450566663544,0.426576501070468,0.696710015581316,0.77320476793256,0.403367049246685,0.667134131534611,0.570676878337677,0,0.164698954724011,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.199141273254367,5.31070122668629,2.85621281524322,3.38123207019241,2.64746726198909,4.07300223052014,2.59502533594179,3.16182685621286,1.32849133181642,0.784993639206874,0.863780147452604,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,2.08440552947533,3.42226450528254,2.54617628662782,1.40814148973101,1.84256883185997,1.42826184531608,0.780534591431195,0.472905432318573,1.32878813789265,0.637819074629948,0.327726629431476,0.172684981865896,1.44649058581512,0,0,0,0,2.88991061978026,3.5163505977661,0,0.504941854408746,3.47059041357882,2.73307121007647,1.29254038639679,2.38968797952552,2.22798674082394,1.69845918473299,8.09621403349789,2.33804686329049,4.34816555741176,0,2.2710413633323,3.5613120733451,2.28041743095006,0.494910368917606,1.32745138339963,0.728341908464944,0,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0,0,0,0,0.340439605753788,0,0.388076051348264,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.358117032009409,0,0,4.45020724825223,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0.621339313086926,0,4.03694674318743,1.98550188548517,6.61134040369762,3.09983576346555,2.53434188236167,3.75543163666413,1.3020438484395,0.314578033277133,0,0.576060012515731,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0.228620419965,0,0,0,0.116876902181569,0.453460767230423,0,0,0,0.965947970160952,0.563047426353546,0.183151624267265,0,0.501572104035363,0.564751842617067,0.920650473014354,1.14579102687879,1.20297227640581,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.341467211508268,1.21553358534147,0,0.735374033800057,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0.468207537349412,0.576226371643824,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0,0.436039249896986,0.282328141245992,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0.749431733813838,0.233931608445408,0,0.57386499620653,0,0.695603506861264 | |||
|short_description=p10@Tril | |||
}} |
Revision as of 10:19, 14 September 2013
Short description: | p10@Tril |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Tril_5end |
Coexpression cluster: | MCL_coexpression_mm9:1206 |
Association with transcript: | -399bp_to_ENSMUST00000127748, NM_025817, uc009bzk.2_5end |
EntrezGene: | Tril |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.55e-11 | 9 |
electrically responsive cell | 1.16e-07 | 39 |
electrically active cell | 1.16e-07 | 39 |
neuron | 6.90e-07 | 33 |
neuronal stem cell | 6.90e-07 | 33 |
neuroblast | 6.90e-07 | 33 |
electrically signaling cell | 6.90e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.55e-11 | 9 |
cavitated compound organ | 6.13e-11 | 21 |
gonad | 3.64e-09 | 18 |
gonad primordium | 3.64e-09 | 18 |
peripheral nervous system | 7.34e-09 | 11 |
posterior neural tube | 1.54e-08 | 12 |
chordal neural plate | 1.54e-08 | 12 |
central nervous system | 1.99e-08 | 73 |
external genitalia | 4.44e-08 | 17 |
indifferent external genitalia | 4.44e-08 | 17 |
indifferent gonad | 4.44e-08 | 17 |
nervous system | 5.39e-08 | 75 |
kidney | 5.50e-07 | 14 |
kidney mesenchyme | 5.50e-07 | 14 |
upper urinary tract | 5.50e-07 | 14 |
kidney rudiment | 5.50e-07 | 14 |
kidney field | 5.50e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.