FFCP PHASE1:Mm9::chr6:86388612..86388630,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=0|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:86388612..86388630,-|id=chr6:86388612..86388630,-|ontology_enrichment_celltype=CL:0000838!5.02e-09!12;CL:0000084!2.49e-08!11;CL:0000827!2.49e-08!11;CL:0000542!4.90e-08!13;CL:0000051!4.90e-08!13;CL:0000624!5.50e-08!8;CL:0000988!3.29e-07!32;CL:0002032!3.29e-07!32;CL:0000037!3.29e-07!32;CL:0000566!3.29e-07!32;CL:0000837!3.29e-07!32;CL:0000791!8.15e-07!9;CL:0000789!8.15e-07!9;CL:0002420!8.15e-07!9;CL:0002419!8.15e-07!9;CL:0000790!8.15e-07!9|ontology_enrichment_celltype_v019_2=CL:0000213,8.69e-14,1;CL:0002078,8.69e-14,1;CL:0000115,8.69e-14,1;CL:0002262,8.69e-14,1;CL:1000398,8.69e-14,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.31e-15,14;UBERON:0003135,6.59e-14,15;UBERON:0002394,8.69e-14,1;UBERON:0001281,8.69e-14,1;UBERON:0000353,8.69e-14,1;UBERON:0003497,8.69e-14,1;UBERON:0003909,8.69e-14,1;UBERON:0003928,8.69e-14,1;UBERON:0003835,8.69e-14,1;UBERON:0003513,8.69e-14,1;UBERON:0001280,8.69e-14,1;UBERON:0004647,8.69e-14,1;UBERON:0002294,8.69e-14,1;UBERON:0001173,8.69e-14,1;UBERON:0004912,8.69e-14,1;UBERON:0005171,8.69e-14,1;UBERON:0000998,2.06e-13,1;UBERON:0007194,2.06e-13,1;UBERON:0006868,2.06e-13,1;UBERON:0003101,4.52e-13,16;UBERON:0000079,4.52e-13,16;UBERON:0004176,2.48e-12,17;UBERON:0009196,2.48e-12,17;UBERON:0009117,2.48e-12,17;UBERON:0000991,1.13e-11,18;UBERON:0005564,1.13e-11,18;UBERON:0003133,7.18e-09,24;UBERON:0005156,3.21e-08,26;UBERON:0000990,3.21e-08,26;UBERON:0000058,5.24e-08,7;UBERON:0010147,2.35e-07,2;UBERON:0003937,2.35e-07,2;UBERON:0005399,2.35e-07,2|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.774739940649458,0.422366166455,0.468129052643987,0.34243593645101,0.398860794976682,0.342401459862411,0.34968160967599,0.333109761815663,0,0,0,0,0,1.7008658030214,0.695036658406197,0.261199789138935,0,0,0,0,0,0,0,0,3.17515336729816,0.61506478758457,0,0.577703239502549,0.166234645358492,0.612508068787107,0.418531630736908,0,0,0,0,0.485510353031154,0.125896817975577,0.202753862439029,0.550640256485045,0.782391344348039,0.218025156380447,0.219686182734472,0,0,0,0.335565212115473,0.725362142011344,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0,0,3.47837386442013,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.239630249011841,0,0.635351135365324,0.149790639404823,0,0.125654352112864,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0.272145996605311,0.12811372028485,0,0,0.215567992932842,0,0.351902248327898,0,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0,0.852490498186778,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0.38660238396628,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0.341741761595705,0,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.552799895217695,0,0,0,0.216010681643603,0,0,0,0,0,0,0,19.7292528539467,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0,0.104859344425711,6.28118714147616,9.50499020650956,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr6:86388612..86388630,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:86388612..86388630,- | |||
|id=chr6:86388612..86388630,- | |||
|ontology_enrichment_celltype=CL:0000838!5.02e-09!12;CL:0000084!2.49e-08!11;CL:0000827!2.49e-08!11;CL:0000542!4.90e-08!13;CL:0000051!4.90e-08!13;CL:0000624!5.50e-08!8;CL:0000988!3.29e-07!32;CL:0002032!3.29e-07!32;CL:0000037!3.29e-07!32;CL:0000566!3.29e-07!32;CL:0000837!3.29e-07!32;CL:0000791!8.15e-07!9;CL:0000789!8.15e-07!9;CL:0002420!8.15e-07!9;CL:0002419!8.15e-07!9;CL:0000790!8.15e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,8.69e-14,1;CL:0002078,8.69e-14,1;CL:0000115,8.69e-14,1;CL:0002262,8.69e-14,1;CL:1000398,8.69e-14,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.31e-15,14;UBERON:0003135,6.59e-14,15;UBERON:0002394,8.69e-14,1;UBERON:0001281,8.69e-14,1;UBERON:0000353,8.69e-14,1;UBERON:0003497,8.69e-14,1;UBERON:0003909,8.69e-14,1;UBERON:0003928,8.69e-14,1;UBERON:0003835,8.69e-14,1;UBERON:0003513,8.69e-14,1;UBERON:0001280,8.69e-14,1;UBERON:0004647,8.69e-14,1;UBERON:0002294,8.69e-14,1;UBERON:0001173,8.69e-14,1;UBERON:0004912,8.69e-14,1;UBERON:0005171,8.69e-14,1;UBERON:0000998,2.06e-13,1;UBERON:0007194,2.06e-13,1;UBERON:0006868,2.06e-13,1;UBERON:0003101,4.52e-13,16;UBERON:0000079,4.52e-13,16;UBERON:0004176,2.48e-12,17;UBERON:0009196,2.48e-12,17;UBERON:0009117,2.48e-12,17;UBERON:0000991,1.13e-11,18;UBERON:0005564,1.13e-11,18;UBERON:0003133,7.18e-09,24;UBERON:0005156,3.21e-08,26;UBERON:0000990,3.21e-08,26;UBERON:0000058,5.24e-08,7;UBERON:0010147,2.35e-07,2;UBERON:0003937,2.35e-07,2;UBERON:0005399,2.35e-07,2 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.774739940649458,0.422366166455,0.468129052643987,0.34243593645101,0.398860794976682,0.342401459862411,0.34968160967599,0.333109761815663,0,0,0,0,0,1.7008658030214,0.695036658406197,0.261199789138935,0,0,0,0,0,0,0,0,3.17515336729816,0.61506478758457,0,0.577703239502549,0.166234645358492,0.612508068787107,0.418531630736908,0,0,0,0,0.485510353031154,0.125896817975577,0.202753862439029,0.550640256485045,0.782391344348039,0.218025156380447,0.219686182734472,0,0,0,0.335565212115473,0.725362142011344,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0,0,3.47837386442013,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.239630249011841,0,0.635351135365324,0.149790639404823,0,0.125654352112864,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0.272145996605311,0.12811372028485,0,0,0.215567992932842,0,0.351902248327898,0,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0,0.852490498186778,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0.38660238396628,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0.341741761595705,0,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.552799895217695,0,0,0,0.216010681643603,0,0,0,0,0,0,0,19.7292528539467,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0,0.104859344425711,6.28118714147616,9.50499020650956,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr6:86388612..86388630,- | |||
}} |
Revision as of 10:49, 14 September 2013
Short description: | p@chr6:86388612..86388630, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:86388612..86388630, - |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 8.69e-14 | 1 |
meso-epithelial cell | 8.69e-14 | 1 |
endothelial cell | 8.69e-14 | 1 |
endothelial cell of sinusoid | 8.69e-14 | 1 |
endothelial cell of hepatic sinusoid | 8.69e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 7.31e-15 | 14 |
male reproductive organ | 6.59e-14 | 15 |
bile duct | 8.69e-14 | 1 |
hepatic sinusoid | 8.69e-14 | 1 |
parenchyma | 8.69e-14 | 1 |
abdomen blood vessel | 8.69e-14 | 1 |
sinusoid | 8.69e-14 | 1 |
digestive system duct | 8.69e-14 | 1 |
abdominal segment blood vessel | 8.69e-14 | 1 |
trunk blood vessel | 8.69e-14 | 1 |
liver parenchyma | 8.69e-14 | 1 |
liver lobule | 8.69e-14 | 1 |
biliary system | 8.69e-14 | 1 |
biliary tree | 8.69e-14 | 1 |
biliary bud | 8.69e-14 | 1 |
hepatic duct | 8.69e-14 | 1 |
seminal vesicle | 2.06e-13 | 1 |
vesicular gland | 2.06e-13 | 1 |
seminal fluid secreting gland | 2.06e-13 | 1 |
male organism | 4.52e-13 | 16 |
male reproductive system | 4.52e-13 | 16 |
external genitalia | 2.48e-12 | 17 |
indifferent external genitalia | 2.48e-12 | 17 |
indifferent gonad | 2.48e-12 | 17 |
gonad | 1.13e-11 | 18 |
gonad primordium | 1.13e-11 | 18 |
reproductive organ | 7.18e-09 | 24 |
reproductive structure | 3.21e-08 | 26 |
reproductive system | 3.21e-08 | 26 |
duct | 5.24e-08 | 7 |
male accessory sex gland | 2.35e-07 | 2 |
sex gland | 2.35e-07 | 2 |
male reproductive gland | 2.35e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.