FFCP PHASE1:Mm9::chr7:134614505..134614520,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=233895|HGNC=|MCL_coexpression_id=2459|UniProt=Q7TPN9|association_with_transcript=0bp_to_uc009jvo.1_5end|description=CAGE_peak_3_at_Prr14_5end|id=chr7:134614505..134614520,+|ontology_enrichment_celltype=CL:0000988!3.07e-07!32;CL:0002032!3.07e-07!32;CL:0000037!3.07e-07!32;CL:0000566!3.07e-07!32;CL:0000837!3.07e-07!32|ontology_enrichment_celltype_v019_2=CL:0000988,2.91e-07,32;CL:0002032,2.91e-07,32;CL:0000037,2.91e-07,32;CL:0000837,2.91e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.25e-12!130;UBERON:0000925!3.25e-12!130;UBERON:0006595!3.25e-12!130;UBERON:0001007!7.34e-12!128;UBERON:0001555!7.34e-12!128;UBERON:0007026!7.34e-12!128;UBERON:0004921!2.48e-11!126;UBERON:0004185!2.48e-11!126;UBERON:0002405!2.96e-10!70;UBERON:0002193!4.64e-10!48;UBERON:0000926!2.54e-09!193;UBERON:0004120!2.54e-09!193;UBERON:0006603!2.54e-09!193;UBERON:0002390!5.31e-09!45;UBERON:0003061!5.31e-09!45;UBERON:0000077!9.07e-09!97;UBERON:0005911!1.07e-08!69;UBERON:0003104!7.64e-08!131;UBERON:0009142!7.64e-08!131;UBERON:0001041!8.67e-08!92|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.12e-12,118;UBERON:0000925,2.12e-12,118;UBERON:0006595,2.12e-12,118;UBERON:0001007,4.73e-12,116;UBERON:0001555,4.73e-12,116;UBERON:0007026,4.73e-12,116;UBERON:0004921,1.61e-11,114;UBERON:0002193,2.17e-10,48;UBERON:0002405,2.17e-10,48;UBERON:0002390,2.57e-09,45;UBERON:0003061,2.57e-09,45;UBERON:0005911,7.94e-09,69;UBERON:0001041,4.10e-08,80;UBERON:0000077,3.36e-07,35;UBERON:0004177,8.32e-07,29;UBERON:0005057,8.32e-07,29|phase1_expression=0.960893082628764,4.53668029931169,3.18499467572675,1.51232105653415,6.51164448930251,2.68606835059024,3.73780224952841,10.3298658753261,8.024957162645,9.36258105287974,4.96532107853964,4.3874687447435,8.56003649656029,12.5885379483356,2.33176833270964,3.84703008040669,3.49780939064073,7.88655413395594,5.07323404341233,8.06340338416257,3.14660173558958,2.78014663362479,2.35079810225042,2.87986361028132,5.04700418347774,2.29692785646008,3.87685796543167,4.95583835177545,4.94060890586572,1.76421090831952,1.55211357458713,1.27006134691926,1.84519436275371,15.8481681015439,3.46621943701529,2.49351968037739,1.83752420636132,7.11503772252743,8.5946887897618,7.32933241563318,11.7646297606203,12.294818729252,7.2826552954673,2.26614272356039,1.01376931219515,0.734187008646726,3.12956537739216,2.18025156380447,2.63623419281366,1.74986909166855,1.39986421625363,0,8.55691290894455,8.70434570413613,6.04968838456435,2.31533492432352,1.71920063963254,4.64104883049698,1.01158230429799,0,0.633831403506179,0.338844532069132,0,4.94944844504769,4.94433181283487,7.8152812644071,2.09720077362883,1.53687322128622,1.24427534770173,1.4850653216486,0.841299845405528,1.71390590642282,0.883474163806454,1.46988959057945,2.68367318851062,0,4.40463523997555,1.14918604276669,1.38245879930619,1.05509030184155,1.09785172322892,0.52091337055676,1.95428099300967,0.56276261003168,1.06958773443767,0.294628585473668,1.13897344639282,0.931997229126503,2.12033341332915,2.26714680320357,1.15945795480671,3.44169550792555,2.03991400112325,3.77792234146472,3.24888208723835,0.896053774194671,2.38755514223978,2.04516387093669,0.519572009205738,1.7666978725517,1.26759077799012,0,0,0,2.59789249213457,1.01343946190039,1.01104889002957,3.53970027129086,13.7237078333001,3.41416919849097,1.38788261412909,3.04465478312141,2.07553947530453,1.3565037649736,2.4693628498498,2.38766523526383,2.47194967734374,4.916378135277,6.19227386364912,1.29413479957927,3.5334642953663,0.969750506270444,3.72783522436244,2.04946557908083,1.67557365450764,5.62005521458901,4.31334448221313,2.99951365496704,4.95573885584952,1.04853447583376,0.915001205637253,0.502617408451458,0.695297280769106,0.767146371990992,1.66230435647648,0.973447578406546,1.2220723662038,3.98102305952298,3.79084137650512,4.8401626853889,1.30120442962704,0.689706313300419,1.80062129805349,1.50704817835715,1.90502197623718,2.43416068541215,1.59292931751539,3.10444044886819,2.80238390812695,1.70195472151037,1.40760899331159,0.219195732427575,2.22437799380478,1.74126083261083,1.85203922767149,0.398068533636986,3.51106593656617,3.08817488537658,4.54661599032948,0.828503090142008,1.87620847984877,1.62055855314913,2.84093682702252,1.77087808572663,1.3884040159864,3.0229412817553,1.07309360559848,1.86824547787471,1.81015834904829,1.97000956894914,2.26992666728396,2.92399974850665,1.53685080703735,2.41571553768669,1.26173969138476,0.720332286654991,8.92130714056255,3.96675849995316,1.2797295032114,0.696710015581316,1.03093969057675,2.01683524623343,1.55664630691409,2.85338439168839,3.32170343081158,3.45867804920423,2.76468729680296,1.98956472041151,2.53453313254856,2.69645822596266,4.53889904736858,5.17767310461355,1.51734320762465,1.82797620175566,0,1.62921062276251,1.35766741017338,1.82353131714828,2.40298841072178,2.95220295959204,2.98297582898612,1.60416313098341,4.15033677922008,3.17005700860579,3.34150291692445,3.37293168577281,2.23146133527353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| ||
|EntrezGene=233895 | |||
|HGNC= | |||
|MCL_coexpression_id=2459 | |||
|UniProt=Q7TPN9 | |||
|association_with_transcript=0bp_to_uc009jvo.1_5end | |||
|description=CAGE_peak_3_at_Prr14_5end | |||
|id=chr7:134614505..134614520,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.07e-07!32;CL:0002032!3.07e-07!32;CL:0000037!3.07e-07!32;CL:0000566!3.07e-07!32;CL:0000837!3.07e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.91e-07,32;CL:0002032,2.91e-07,32;CL:0000037,2.91e-07,32;CL:0000837,2.91e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.25e-12!130;UBERON:0000925!3.25e-12!130;UBERON:0006595!3.25e-12!130;UBERON:0001007!7.34e-12!128;UBERON:0001555!7.34e-12!128;UBERON:0007026!7.34e-12!128;UBERON:0004921!2.48e-11!126;UBERON:0004185!2.48e-11!126;UBERON:0002405!2.96e-10!70;UBERON:0002193!4.64e-10!48;UBERON:0000926!2.54e-09!193;UBERON:0004120!2.54e-09!193;UBERON:0006603!2.54e-09!193;UBERON:0002390!5.31e-09!45;UBERON:0003061!5.31e-09!45;UBERON:0000077!9.07e-09!97;UBERON:0005911!1.07e-08!69;UBERON:0003104!7.64e-08!131;UBERON:0009142!7.64e-08!131;UBERON:0001041!8.67e-08!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.12e-12,118;UBERON:0000925,2.12e-12,118;UBERON:0006595,2.12e-12,118;UBERON:0001007,4.73e-12,116;UBERON:0001555,4.73e-12,116;UBERON:0007026,4.73e-12,116;UBERON:0004921,1.61e-11,114;UBERON:0002193,2.17e-10,48;UBERON:0002405,2.17e-10,48;UBERON:0002390,2.57e-09,45;UBERON:0003061,2.57e-09,45;UBERON:0005911,7.94e-09,69;UBERON:0001041,4.10e-08,80;UBERON:0000077,3.36e-07,35;UBERON:0004177,8.32e-07,29;UBERON:0005057,8.32e-07,29 | |||
|phase1_expression=0.960893082628764,4.53668029931169,3.18499467572675,1.51232105653415,6.51164448930251,2.68606835059024,3.73780224952841,10.3298658753261,8.024957162645,9.36258105287974,4.96532107853964,4.3874687447435,8.56003649656029,12.5885379483356,2.33176833270964,3.84703008040669,3.49780939064073,7.88655413395594,5.07323404341233,8.06340338416257,3.14660173558958,2.78014663362479,2.35079810225042,2.87986361028132,5.04700418347774,2.29692785646008,3.87685796543167,4.95583835177545,4.94060890586572,1.76421090831952,1.55211357458713,1.27006134691926,1.84519436275371,15.8481681015439,3.46621943701529,2.49351968037739,1.83752420636132,7.11503772252743,8.5946887897618,7.32933241563318,11.7646297606203,12.294818729252,7.2826552954673,2.26614272356039,1.01376931219515,0.734187008646726,3.12956537739216,2.18025156380447,2.63623419281366,1.74986909166855,1.39986421625363,0,8.55691290894455,8.70434570413613,6.04968838456435,2.31533492432352,1.71920063963254,4.64104883049698,1.01158230429799,0,0.633831403506179,0.338844532069132,0,4.94944844504769,4.94433181283487,7.8152812644071,2.09720077362883,1.53687322128622,1.24427534770173,1.4850653216486,0.841299845405528,1.71390590642282,0.883474163806454,1.46988959057945,2.68367318851062,0,4.40463523997555,1.14918604276669,1.38245879930619,1.05509030184155,1.09785172322892,0.52091337055676,1.95428099300967,0.56276261003168,1.06958773443767,0.294628585473668,1.13897344639282,0.931997229126503,2.12033341332915,2.26714680320357,1.15945795480671,3.44169550792555,2.03991400112325,3.77792234146472,3.24888208723835,0.896053774194671,2.38755514223978,2.04516387093669,0.519572009205738,1.7666978725517,1.26759077799012,0,0,0,2.59789249213457,1.01343946190039,1.01104889002957,3.53970027129086,13.7237078333001,3.41416919849097,1.38788261412909,3.04465478312141,2.07553947530453,1.3565037649736,2.4693628498498,2.38766523526383,2.47194967734374,4.916378135277,6.19227386364912,1.29413479957927,3.5334642953663,0.969750506270444,3.72783522436244,2.04946557908083,1.67557365450764,5.62005521458901,4.31334448221313,2.99951365496704,4.95573885584952,1.04853447583376,0.915001205637253,0.502617408451458,0.695297280769106,0.767146371990992,1.66230435647648,0.973447578406546,1.2220723662038,3.98102305952298,3.79084137650512,4.8401626853889,1.30120442962704,0.689706313300419,1.80062129805349,1.50704817835715,1.90502197623718,2.43416068541215,1.59292931751539,3.10444044886819,2.80238390812695,1.70195472151037,1.40760899331159,0.219195732427575,2.22437799380478,1.74126083261083,1.85203922767149,0.398068533636986,3.51106593656617,3.08817488537658,4.54661599032948,0.828503090142008,1.87620847984877,1.62055855314913,2.84093682702252,1.77087808572663,1.3884040159864,3.0229412817553,1.07309360559848,1.86824547787471,1.81015834904829,1.97000956894914,2.26992666728396,2.92399974850665,1.53685080703735,2.41571553768669,1.26173969138476,0.720332286654991,8.92130714056255,3.96675849995316,1.2797295032114,0.696710015581316,1.03093969057675,2.01683524623343,1.55664630691409,2.85338439168839,3.32170343081158,3.45867804920423,2.76468729680296,1.98956472041151,2.53453313254856,2.69645822596266,4.53889904736858,5.17767310461355,1.51734320762465,1.82797620175566,0,1.62921062276251,1.35766741017338,1.82353131714828,2.40298841072178,2.95220295959204,2.98297582898612,1.60416313098341,4.15033677922008,3.17005700860579,3.34150291692445,3.37293168577281,2.23146133527353,1.68824011826692,1.2731292589071,1.43848068725405,2.91843408195064,2.74561413188081,8.62609239164127,3.34926852901653,2.49630138491648,3.53610429125956,2.87035861635059,1.92977408545347,6.65111484599777,0.947457058852424,2.28150967018836,1.52770577197669,2.58159273117352,3.01511263395268,2.85652369063216,4.09780660501378,5.04432461139811,5.09368786192182,4.14582398509466,6.06294264448231,4.83517949224508,5.35201516751593,1.50791283939272,1.63171705145613,2.45882136509518,5.51873492609465,1.9266070798535,1.87538698547525,0.983609672260053,1.51482556322624,0.315508219416257,1.56175497718655,1.72338718186239,1.43381278771531,1.33679204449436,1.69845918473299,2.02405350837447,0.584511715822624,0.790575555893047,0.963963949265421,2.55492153374884,1.42452482933804,0.162886959353576,2.96946221350564,2.65490276679926,1.69946445308487,0.604647113929502,2.26326095707078,3.54362271456927,1.22974059177571,2.58428293168221,2.90826983582004,1.42598951353889,4.74055136903724,2.10837217149998,4.12542172992747,2.38307724027652,1.8006109403131,2.71653235943784,1.71469628025274,1.06404140185364,0.535106452806212,0.658196082408484,1.8267896946876,4.22409074514679,2.33015277950202,3.74898276693435,4.28704257647848,2.58343082713449,3.79971427047382,3.34242563208782,3.61109979439135,3.49777003955821,3.52308073819968,4.78438466233988,2.06386867963222,3.51869602002452,5.27431679613135,3.96413260390973,5.0331198105435,1.86976272993241,2.23922323717853,3.45499934511059,7.63736494412091,1.26534397432454,2.84647253977588,1.18805874903981,1.88179466413022,2.62035076495413,3.23674431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| |||
|short_description=p3@Prr14 | |||
}} |
Revision as of 11:55, 14 September 2013
Short description: | p3@Prr14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Prr14_5end |
Coexpression cluster: | MCL_coexpression_mm9:2459 |
Association with transcript: | 0bp_to_uc009jvo.1_5end |
EntrezGene: | Prr14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.91e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.91e-07 | 32 |
hematopoietic stem cell | 2.91e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.91e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.12e-12 | 118 |
endoderm | 2.12e-12 | 118 |
presumptive endoderm | 2.12e-12 | 118 |
digestive system | 4.73e-12 | 116 |
digestive tract | 4.73e-12 | 116 |
primitive gut | 4.73e-12 | 116 |
subdivision of digestive tract | 1.61e-11 | 114 |
hemolymphoid system | 2.17e-10 | 48 |
immune system | 2.17e-10 | 48 |
hematopoietic system | 2.57e-09 | 45 |
blood island | 2.57e-09 | 45 |
endo-epithelium | 7.94e-09 | 69 |
foregut | 4.10e-08 | 80 |
mixed endoderm/mesoderm-derived structure | 3.36e-07 | 35 |
hemopoietic organ | 8.32e-07 | 29 |
immune organ | 8.32e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.