FFCP PHASE1:Mm9::chr8:26127507..26127525,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11502|HGNC=|UniProt=Q61072,Q3U1W3,Q3UG15|association_with_transcript=-113bp_to_ENSMUST00000084035,NM_007404,uc009lfk.2,uc009lfl.2_5end|description=CAGE_peak_3_at_Adam9_5end|id=chr8:26127507..26127525,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.39e-08!17;UBERON:0005181!2.39e-08!17;UBERON:0002224!2.39e-08!17;UBERON:0000915!2.39e-08!17;UBERON:0008947!2.39e-08!17;UBERON:0003258!2.39e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.66e-10,17;UBERON:0005181,3.66e-10,17;UBERON:0002224,3.66e-10,17;UBERON:0000915,3.66e-10,17;UBERON:0008947,3.66e-10,17;UBERON:0003258,3.66e-10,17;UBERON:0002048,1.31e-07,14;UBERON:0000117,1.31e-07,14;UBERON:0000171,1.31e-07,14;UBERON:0000170,1.31e-07,14;UBERON:0005597,1.31e-07,14;UBERON:0000118,1.31e-07,14|phase1_expression=0.480446541314382,0.348975407639361,0,0.90739263392049,0.500895729946347,0.16787927191189,0.467225281191051,0.258246646883153,0.140788722151667,0.468129052643987,0.513653904676515,0.319088635981346,0.171200729931206,0.174840804837995,0,0.202475267389826,2.09868563438444,2.68142840554502,1.50825876966313,1.69755860719212,1.78590909317247,0.794327609607082,1.04479915655574,0.319984845586813,0.68822784320151,0.57423196411502,0.430761996159075,0,0.760093677825496,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,1.67412652294763,0,0.523523743973798,2.35292595212406,0,0.485510353031154,0.755380907853464,0.912392380975631,4.58866880404204,0,1.30815093828268,1.09843091367236,1.74986909166855,2.79972843250725,0,7.04686945442493,0.725362142011344,0.672187598284928,10.8048963135098,2.57880095944881,4.64104883049698,0.606949382578793,0.528990979272033,0.633831403506179,2.37191172448392,1.77858959222228,0.449949858640699,0,0.7104801149461,0.299600110518405,1.15265491596466,0,0.405017814995072,0,0.856952953211411,0.220868540951614,0.489963196859816,0.670918297127655,0.919218786610021,3.30347642998166,0.383062014255563,0.768032666281217,0,0.182975287204819,0,0.837548997004143,1.68828783009504,2.44477196442896,1.17851434189467,0.854230084794618,0.372798891650601,1.36307147999731,3.09843396437821,1.73918693221007,1.72084775396277,0,0.539703191637817,2.59910566979068,0.896053774194671,1.12355536105401,3.57903677413921,2.07828803682295,3.18005617059306,0.845060518660083,1.28326477414318,0,7.11066703153331,9.52560580449342,7.85415582972806,5.56076889516262,0.91347103775248,2.33044095282455,0.593768556259299,0.520455980298408,0,0.461230994512117,0.301445281105245,0.823120949949934,0.628332956648377,1.48316980640624,1.01219549843938,0.884610551949874,0.808834249737046,0.662524555381181,2.90925151881133,3.72783522436244,0.292780797011547,1.04723353406728,1.27728527604296,0.11981512450592,0,0.508280908292259,0.898743836428936,0.915001205637253,0.753926112677186,0.695297280769106,1.02286182932132,0.20778804455956,1.1356888414743,0.407357455401265,1.7416975885413,1.0108910337347,0.420883711772948,0.650602214813519,1.14951052216736,0.720248519221397,1.9591626318643,1.02054748726992,1.40925092313335,1.3118241438362,0.776110112217047,0.646703978798527,0.567318240503458,0,0.657587197282725,0,1.39300866608867,0.823128545631774,0.398068533636986,0.702213187313235,0,0.284163499395593,1.44988040774851,0.703578179943289,0.900310307305074,0.23674473558521,0.393528463494808,1.85120535464854,1.62773761325285,1.60964040839772,1.05088808130453,0.987359099480883,1.31333971263276,1.21603214318784,0.438599962275997,1.3173006917463,1.34206418760372,0.841159794256509,1.13195073617213,1.65209391491899,0.264450566663544,0.426576501070468,0.232236671860439,0.38660238396628,1.00841762311671,0.22237804384487,0.380451252225118,0.949058123089023,0.494096864172033,0,0.596869416123452,0.19496408711912,0,1.08069024937347,0.597423819763102,0,0.456994050438915,2.25415471346161,1.01825663922657,0,0.841629838683823,1.64414996523069,0.590440591918409,1.72698600625512,0.987177311374404,1.1858105083486,0.500535317148282,0.196558995113203,0.449724224769707,0.608580364165509,0,0.763877555344259,0.287696137450811,0.648540907100142,1.37280706594041,1.43768206527355,0.372140947668503,0.312037673114561,0.757736633841335,0.717589654087649,0.482443521363367,2.21703828199926,0.757965647081939,1.14075483509418,1.18821560042632,1.87752198630802,1.84256883185997,2.14239276797412,3.31727201358258,2.04925687338048,2.21464689648775,2.39182152986231,2.29408640602033,1.20879487306127,2.4590339958857,1.50791283939272,4.35124547054968,0.491764273019036,0.551873492609465,1.12385412991454,1.52375192569864,0.491804836130026,1.00988370881749,0.631016438832513,1.56175497718655,0.861693590931196,1.19484398976276,1.78238939265915,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,0.642642632843614,0.709700426041343,0.534196811001766,0.651547837414304,0.329940245945071,0,0.485561272309963,0.604647113929502,0,0.295301892880773,0,1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| ||
|EntrezGene=11502 | |||
|HGNC= | |||
|UniProt=Q61072,Q3U1W3,Q3UG15 | |||
|association_with_transcript=-113bp_to_ENSMUST00000084035,NM_007404,uc009lfk.2,uc009lfl.2_5end | |||
|description=CAGE_peak_3_at_Adam9_5end | |||
|id=chr8:26127507..26127525,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.39e-08!17;UBERON:0005181!2.39e-08!17;UBERON:0002224!2.39e-08!17;UBERON:0000915!2.39e-08!17;UBERON:0008947!2.39e-08!17;UBERON:0003258!2.39e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.66e-10,17;UBERON:0005181,3.66e-10,17;UBERON:0002224,3.66e-10,17;UBERON:0000915,3.66e-10,17;UBERON:0008947,3.66e-10,17;UBERON:0003258,3.66e-10,17;UBERON:0002048,1.31e-07,14;UBERON:0000117,1.31e-07,14;UBERON:0000171,1.31e-07,14;UBERON:0000170,1.31e-07,14;UBERON:0005597,1.31e-07,14;UBERON:0000118,1.31e-07,14 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0,0.90739263392049,0.500895729946347,0.16787927191189,0.467225281191051,0.258246646883153,0.140788722151667,0.468129052643987,0.513653904676515,0.319088635981346,0.171200729931206,0.174840804837995,0,0.202475267389826,2.09868563438444,2.68142840554502,1.50825876966313,1.69755860719212,1.78590909317247,0.794327609607082,1.04479915655574,0.319984845586813,0.68822784320151,0.57423196411502,0.430761996159075,0,0.760093677825496,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,1.67412652294763,0,0.523523743973798,2.35292595212406,0,0.485510353031154,0.755380907853464,0.912392380975631,4.58866880404204,0,1.30815093828268,1.09843091367236,1.74986909166855,2.79972843250725,0,7.04686945442493,0.725362142011344,0.672187598284928,10.8048963135098,2.57880095944881,4.64104883049698,0.606949382578793,0.528990979272033,0.633831403506179,2.37191172448392,1.77858959222228,0.449949858640699,0,0.7104801149461,0.299600110518405,1.15265491596466,0,0.405017814995072,0,0.856952953211411,0.220868540951614,0.489963196859816,0.670918297127655,0.919218786610021,3.30347642998166,0.383062014255563,0.768032666281217,0,0.182975287204819,0,0.837548997004143,1.68828783009504,2.44477196442896,1.17851434189467,0.854230084794618,0.372798891650601,1.36307147999731,3.09843396437821,1.73918693221007,1.72084775396277,0,0.539703191637817,2.59910566979068,0.896053774194671,1.12355536105401,3.57903677413921,2.07828803682295,3.18005617059306,0.845060518660083,1.28326477414318,0,7.11066703153331,9.52560580449342,7.85415582972806,5.56076889516262,0.91347103775248,2.33044095282455,0.593768556259299,0.520455980298408,0,0.461230994512117,0.301445281105245,0.823120949949934,0.628332956648377,1.48316980640624,1.01219549843938,0.884610551949874,0.808834249737046,0.662524555381181,2.90925151881133,3.72783522436244,0.292780797011547,1.04723353406728,1.27728527604296,0.11981512450592,0,0.508280908292259,0.898743836428936,0.915001205637253,0.753926112677186,0.695297280769106,1.02286182932132,0.20778804455956,1.1356888414743,0.407357455401265,1.7416975885413,1.0108910337347,0.420883711772948,0.650602214813519,1.14951052216736,0.720248519221397,1.9591626318643,1.02054748726992,1.40925092313335,1.3118241438362,0.776110112217047,0.646703978798527,0.567318240503458,0,0.657587197282725,0,1.39300866608867,0.823128545631774,0.398068533636986,0.702213187313235,0,0.284163499395593,1.44988040774851,0.703578179943289,0.900310307305074,0.23674473558521,0.393528463494808,1.85120535464854,1.62773761325285,1.60964040839772,1.05088808130453,0.987359099480883,1.31333971263276,1.21603214318784,0.438599962275997,1.3173006917463,1.34206418760372,0.841159794256509,1.13195073617213,1.65209391491899,0.264450566663544,0.426576501070468,0.232236671860439,0.38660238396628,1.00841762311671,0.22237804384487,0.380451252225118,0.949058123089023,0.494096864172033,0,0.596869416123452,0.19496408711912,0,1.08069024937347,0.597423819763102,0,0.456994050438915,2.25415471346161,1.01825663922657,0,0.841629838683823,1.64414996523069,0.590440591918409,1.72698600625512,0.987177311374404,1.1858105083486,0.500535317148282,0.196558995113203,0.449724224769707,0.608580364165509,0,0.763877555344259,0.287696137450811,0.648540907100142,1.37280706594041,1.43768206527355,0.372140947668503,0.312037673114561,0.757736633841335,0.717589654087649,0.482443521363367,2.21703828199926,0.757965647081939,1.14075483509418,1.18821560042632,1.87752198630802,1.84256883185997,2.14239276797412,3.31727201358258,2.04925687338048,2.21464689648775,2.39182152986231,2.29408640602033,1.20879487306127,2.4590339958857,1.50791283939272,4.35124547054968,0.491764273019036,0.551873492609465,1.12385412991454,1.52375192569864,0.491804836130026,1.00988370881749,0.631016438832513,1.56175497718655,0.861693590931196,1.19484398976276,1.78238939265915,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,0.642642632843614,0.709700426041343,0.534196811001766,0.651547837414304,0.329940245945071,0,0.485561272309963,0.604647113929502,0,0.295301892880773,0,1.03371317267288,1.45413491791002,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,0,0.36012218806262,0.258717367565509,0.857348140126369,0.532020700926821,1.78368817602071,0.822745103010605,0.913394847343798,1.87737366450968,2.33015277950202,1.98475558249466,0.32977250588296,0.807322133479528,1.14594557363496,0.716234064018819,1.31312719796049,0.582961673259701,0.927126510052548,1.19609616558497,1.44470807574256,0.925972636848558,0.376736914009382,0.956859594047176,0.915112692826091,0.509935289981566,0.559805809294632,0.138199973804424,0.954670618015114,0.949007980743406,1.21991680276109,1.08005340821801,0.627264888043406,0.87345025498471,0.944050424693745,0.578574190077352,2.09404753587224,1.03691978633434,1.24267862617385,0.56369293868419,0.448549638131936,0.330916980914195,0.583353565032143,0.774958940866387,1.520605129417,1.17357238645754,1.43224823328345,1.0485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| |||
|short_description=p3@Adam9 | |||
}} | |||
Revision as of 15:24, 14 September 2013
| Short description: | p3@Adam9 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Adam9_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -113bp_to_ENSMUST00000084035, NM_007404, uc009lfk.2, uc009lfl.2_5end |
| EntrezGene: | Adam9 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| thoracic cavity element | 3.66e-10 | 17 |
| thoracic segment organ | 3.66e-10 | 17 |
| thoracic cavity | 3.66e-10 | 17 |
| thoracic segment of trunk | 3.66e-10 | 17 |
| respiratory primordium | 3.66e-10 | 17 |
| endoderm of foregut | 3.66e-10 | 17 |
| lung | 1.31e-07 | 14 |
| respiratory tube | 1.31e-07 | 14 |
| respiration organ | 1.31e-07 | 14 |
| pair of lungs | 1.31e-07 | 14 |
| lung primordium | 1.31e-07 | 14 |
| lung bud | 1.31e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
