FFCP PHASE1:Mm9::chr9:106362954..106362977,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=59092|HGNC=|MCL_coexpression_id=30|UniProt=|association_with_transcript=-4bp_to_uc012gzv.1_5end|description=CAGE_peak_6_at_Pcbp4_5end|id=chr9:106362954..106362977,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.19e-12!63;UBERON:0002346!1.96e-09!71;UBERON:0003075!1.96e-09!71;UBERON:0007284!1.96e-09!71;UBERON:0001264!3.39e-09!12;UBERON:0003922!3.39e-09!12;UBERON:0002114!3.39e-09!12;UBERON:0003923!3.39e-09!12;UBERON:0003924!3.39e-09!12;UBERON:0003921!3.39e-09!12;UBERON:0003056!3.64e-09!49;UBERON:0002616!7.29e-09!49;UBERON:0000955!1.46e-08!50;UBERON:0006238!1.46e-08!50;UBERON:0001045!2.61e-08!13;UBERON:0001049!3.44e-08!52;UBERON:0005068!3.44e-08!52;UBERON:0006241!3.44e-08!52;UBERON:0007135!3.44e-08!52;UBERON:0002108!8.95e-08!16;UBERON:0004121!1.09e-07!102;UBERON:0000924!1.09e-07!102;UBERON:0006601!1.09e-07!102;UBERON:0001017!2.40e-07!73;UBERON:0005743!2.40e-07!73;UBERON:0000073!5.81e-07!75;UBERON:0001016!5.81e-07!75;UBERON:0007811!6.82e-07!86;UBERON:0002298!8.28e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.26e-12,12;UBERON:0004733,2.43e-12,6;UBERON:0004732,2.43e-12,6;UBERON:0002028,2.43e-12,6;UBERON:0007277,2.43e-12,6;UBERON:0001896,9.09e-10,2;UBERON:0002298,9.09e-10,2;UBERON:0005290,9.09e-10,2;UBERON:0010096,9.09e-10,2;UBERON:0003076,3.18e-09,12;UBERON:0003057,3.18e-09,12;UBERON:0002075,8.73e-08,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0,0,0,0.383062014255563,0.153606533256243,0.263772575460388,0,0,12.2840519560608,0,2.90316670775939,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,80.5147191781755,91.5282108774799,2.04365644166873,0,0,0,0.599162557619291,0.457500602818626,0,0.173824320192276,0,1.0389402227978,0.162241263067758,0,0,0,1.05220927943237,0.390361328888111,0.229902104433473,0,0,0.136072998302656,0.12811372028485,0.187403449119458,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,1.32167513193519,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,1.79763881730844,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58257418949947,4.33683240391152,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0,0,19.9117707509944,0,0,0,0.295301892880773,0.307435147943927,0.516856586336442,1.45413491791002,1.06949213515416,6.32073515871632,22.1379078007497,33.0033738394198,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0.231867835620421|short_description=p6@Pcbp4}} | ||
|EntrezGene=59092 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_uc012gzv.1_5end | |||
|description=CAGE_peak_6_at_Pcbp4_5end | |||
|id=chr9:106362954..106362977,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.19e-12!63;UBERON:0002346!1.96e-09!71;UBERON:0003075!1.96e-09!71;UBERON:0007284!1.96e-09!71;UBERON:0001264!3.39e-09!12;UBERON:0003922!3.39e-09!12;UBERON:0002114!3.39e-09!12;UBERON:0003923!3.39e-09!12;UBERON:0003924!3.39e-09!12;UBERON:0003921!3.39e-09!12;UBERON:0003056!3.64e-09!49;UBERON:0002616!7.29e-09!49;UBERON:0000955!1.46e-08!50;UBERON:0006238!1.46e-08!50;UBERON:0001045!2.61e-08!13;UBERON:0001049!3.44e-08!52;UBERON:0005068!3.44e-08!52;UBERON:0006241!3.44e-08!52;UBERON:0007135!3.44e-08!52;UBERON:0002108!8.95e-08!16;UBERON:0004121!1.09e-07!102;UBERON:0000924!1.09e-07!102;UBERON:0006601!1.09e-07!102;UBERON:0001017!2.40e-07!73;UBERON:0005743!2.40e-07!73;UBERON:0000073!5.81e-07!75;UBERON:0001016!5.81e-07!75;UBERON:0007811!6.82e-07!86;UBERON:0002298!8.28e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.26e-12,12;UBERON:0004733,2.43e-12,6;UBERON:0004732,2.43e-12,6;UBERON:0002028,2.43e-12,6;UBERON:0007277,2.43e-12,6;UBERON:0001896,9.09e-10,2;UBERON:0002298,9.09e-10,2;UBERON:0005290,9.09e-10,2;UBERON:0010096,9.09e-10,2;UBERON:0003076,3.18e-09,12;UBERON:0003057,3.18e-09,12;UBERON:0002075,8.73e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0,0,0,0.383062014255563,0.153606533256243,0.263772575460388,0,0,12.2840519560608,0,2.90316670775939,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,80.5147191781755,91.5282108774799,2.04365644166873,0,0,0,0.599162557619291,0.457500602818626,0,0.173824320192276,0,1.0389402227978,0.162241263067758,0,0,0,1.05220927943237,0.390361328888111,0.229902104433473,0,0,0.136072998302656,0.12811372028485,0.187403449119458,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,1.32167513193519,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,1.79763881730844,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58257418949947,4.33683240391152,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0,0,19.9117707509944,0,0,0,0.295301892880773,0.307435147943927,0.516856586336442,1.45413491791002,1.06949213515416,6.32073515871632,22.1379078007497,33.0033738394198,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p6@Pcbp4 | |||
}} |
Revision as of 16:43, 14 September 2013
Short description: | p6@Pcbp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pcbp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -4bp_to_uc012gzv.1_5end |
EntrezGene: | Pcbp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pancreas | 1.26e-12 | 12 |
segmental subdivision of hindbrain | 2.43e-12 | 6 |
segmental subdivision of nervous system | 2.43e-12 | 6 |
hindbrain | 2.43e-12 | 6 |
presumptive hindbrain | 2.43e-12 | 6 |
medulla oblongata | 9.09e-10 | 2 |
brainstem | 9.09e-10 | 2 |
myelencephalon | 9.09e-10 | 2 |
future myelencephalon | 9.09e-10 | 2 |
posterior neural tube | 3.18e-09 | 12 |
chordal neural plate | 3.18e-09 | 12 |
viscus | 8.73e-08 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.