FFCP PHASE1:Hg19::chr1:153587049..153587084,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:153587049..153587084,+ | |||
|id=chr1:153587049..153587084,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.24e-32!43;CL:0000223!8.28e-24!59;CL:0000066!3.55e-23!254;CL:0002368!1.17e-17!13;CL:0002251!1.94e-13!21;CL:0002202!4.64e-12!9;CL:0002632!4.64e-12!9;CL:0002159!3.09e-10!13;CL:0000244!7.96e-08!4;CL:0000731!7.96e-08!4;CL:0002327!1.85e-07!4;CL:0002328!7.78e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.52e-20;13!CL:0002159;6.16e-18;14!CL:0002202;8.54e-14;9!CL:0002632;8.54e-14;9!CL:0000244;1.38e-13;4!CL:0000731;1.38e-13;4!CL:0002076;1.53e-12;42!CL:0002328;1.01e-11;3!CL:0000307;4.19e-11;3!CL:0002166;2.36e-10;3!CL:0002577;5.87e-10;3!CL:0000240;6.29e-09;6!CL:0000311;6.29e-09;6!CL:0000079;6.29e-09;6!CL:0000237;6.29e-09;6!CL:0002077;2.56e-08;34!CL:0002327;3.93e-08;4!CL:0000575;4.74e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,4.50e-20,13;CL:0002159,4.95e-18,14;CL:0000066,1.26e-16,253;CL:0002076,1.77e-16,42;CL:0002202,8.67e-14,9;CL:0002632,8.67e-14,9;CL:0000244,1.32e-13,4;CL:0000731,1.32e-13,4;CL:0002328,1.04e-11,3;CL:0000068,4.20e-11,3;CL:0000069,4.20e-11,3;CL:0000307,4.20e-11,3;CL:0000377,4.20e-11,3;CL:0000223,7.49e-11,58;CL:0002166,1.69e-10,3;CL:0002577,4.72e-10,3;CL:0002077,1.21e-09,34;CL:0000240,5.74e-09,6;CL:0000311,5.74e-09,6;CL:0000079,5.74e-09,6;CL:0000237,5.74e-09,6;CL:0000036,5.74e-09,6;CL:0000357,5.74e-09,6;CL:0000114,5.74e-09,6;CL:0002327,4.04e-08,4;CL:0000575,4.07e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000377;4.19e-11;3!CL:0000357;6.29e-09;6!CL:0000114;6.29e-09;6!UBERON:0008814;1.12e-07;2!UBERON:0010056;1.12e-07;2!CL:0000223;1.59e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!1.32e-09!14;DOID:305!2.34e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.85e-26!169;UBERON:0000925!3.85e-26!169;UBERON:0006595!3.85e-26!169;UBERON:0001007!9.04e-18!155;UBERON:0001555!9.04e-18!155;UBERON:0007026!9.04e-18!155;UBERON:0001004!4.03e-14!72;UBERON:0004921!1.51e-13!129;UBERON:0004185!1.51e-13!129;UBERON:0000077!2.94e-11!130;UBERON:0007196!1.19e-10!14;UBERON:0001558!1.19e-10!14;UBERON:0000161!1.62e-10!35;UBERON:0000166!2.53e-10!21;UBERON:0000065!2.78e-10!53;UBERON:0005911!3.58e-09!82;UBERON:0000974!1.97e-08!10;UBERON:0000165!3.11e-08!28;UBERON:0000930!3.11e-08!28;UBERON:0003729!4.41e-08!5;UBERON:0001041!8.29e-08!98;UBERON:0001911!1.85e-07!4;UBERON:0005333!1.85e-07!4;UBERON:0008425!1.85e-07!4;UBERON:0005311!1.85e-07!4;UBERON:0000344!3.35e-07!12;UBERON:0000072!5.15e-07!46;UBERON:0004815!7.78e-07!3;UBERON:0002031!7.78e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.01e-11;3!UBERON:0002031;1.01e-11;3!UBERON:0000365;7.09e-11;5!UBERON:0001723;7.39e-11;3!UBERON:0001033;7.39e-11;3!UBERON:0000486;2.22e-09;12!UBERON:0005910;4.58e-09;6!UBERON:0001911;3.93e-08;4!UBERON:0007196;5.88e-08;15!UBERON:0001558;5.88e-08;15!UBERON:0001708;7.27e-08;4!UBERON:0008895;7.27e-08;4!UBERON:0001987;1.42e-07;4!UBERON:0002185;3.69e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.09e-13,160;UBERON:0000925,1.09e-13,160;UBERON:0006595,1.09e-13,160;UBERON:0004815,1.04e-11,3;UBERON:0002031,1.04e-11,3;UBERON:0000365,6.84e-11,5;UBERON:0001723,8.18e-11,3;UBERON:0001033,8.18e-11,3;UBERON:0010056,8.18e-11,3;UBERON:0005910,4.45e-09,6;UBERON:0003102,2.80e-08,99;UBERON:0001911,4.04e-08,4;UBERON:0005333,4.04e-08,4;UBERON:0008425,4.04e-08,4;UBERON:0005311,4.04e-08,4;UBERON:0001708,5.66e-08,4;UBERON:0008895,5.66e-08,4;UBERON:0007196,5.92e-08,15;UBERON:0001558,5.92e-08,15;UBERON:0000065,1.18e-07,54;UBERON:0001987,1.21e-07,4;UBERON:0004340,1.21e-07,4;UBERON:0002185,3.73e-07,5;UBERON:0006554,3.98e-07,47;UBERON:0001008,6.28e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.27479102031034,8.13255980701275,8.13458822366933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,3.64295288292542,6.67411997011973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9910864480622,1.09098448236334,0.860413786167011,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.491953754172454,0,3.51200913307602,1.1240175325762,6.63491217916764,1.75918045801206,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,2.81201501960331,1.6798212819886,3.26082723657489,4.65704318054811,2.03443756959773,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,2.72814814301633,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,1.20303882181971,3.22283461275637,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0,0,0.103041011647722,0,0,0,5.85054221432869,0,0,0,0,0,0,0,0,0,2.64455864577565,2.49847087574638,0.382838137483752,2.52894452138875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59799704358883,5.3624182042863,5.44454924306613,0.0941438007767792,1.72202149068492,3.36942951335251,5.32116184244011,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0,0,0,0.23874448473769,1.48482340416319,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,3.58042349351218,0,0,0,0,0,0,0,1.04171104434093,0.524759999977174,0,4.43794448313449,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,2.23077990845765,0.230850775511391,0,0.23056390438806,0,1.3037684630641,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,1.99052386215701,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0.586993856796269,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,1.07791637155815,0,0.17472666824203,0,0.0967563312890851,0,0.164230914106418,2.32773639572207,0,0.451961481561065,0,0,0,0.586654148204409,0,0.426905989478705,0,0.288180834308212,0,0,0.288109595976299,0,3.53541051925193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,11.0693446907758,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49698769298611,1.86623178009892,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.471878893390961,0.733714394086716,1.27078232765372,0,0,0,0,0,1.56302802246618,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,1.00108261702862,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0.098150233615243,0.853425474875886,0,0,0,0,0,0,0,0,0,0,0.308696632431779,1.96703604453562,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0.705789743431384,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.852935927603924,0.23806443146374,0.258355639344024,0.186224142887574,0,0.190941474834495,0.606351566874658,8.27323642008453,4.10679961302337,1.0776328482334,0.215166616178029,0.665320713092027,0,0,0,0,0,0,4.47585796147312,0.665756774185513,0,0 | |||
|short_description=p@chr1:153587049..153587084,+ | |||
}} |
Revision as of 21:02, 10 January 2014
Short description: | p@chr1:153587049..153587084, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:153587049..153587084, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 4.50e-20 | 13 |
general ecto-epithelial cell | 4.95e-18 | 14 |
epithelial cell | 1.26e-16 | 253 |
endo-epithelial cell | 1.77e-16 | 42 |
epithelial cell of tracheobronchial tree | 8.67e-14 | 9 |
epithelial cell of lower respiratory tract | 8.67e-14 | 9 |
transitional epithelial cell | 1.32e-13 | 4 |
urothelial cell | 1.32e-13 | 4 |
bronchial epithelial cell | 1.04e-11 | 3 |
duct epithelial cell | 4.20e-11 | 3 |
branched duct epithelial cell | 4.20e-11 | 3 |
tracheal epithelial cell | 4.20e-11 | 3 |
tracheoblast | 4.20e-11 | 3 |
endodermal cell | 7.49e-11 | 58 |
epithelial cell of Malassez | 1.69e-10 | 3 |
placental epithelial cell | 4.72e-10 | 3 |
ecto-epithelial cell | 1.21e-09 | 34 |
stratified squamous epithelial cell | 5.74e-09 | 6 |
keratin accumulating cell | 5.74e-09 | 6 |
stratified epithelial cell | 5.74e-09 | 6 |
keratinizing barrier epithelial cell | 5.74e-09 | 6 |
epithelial fate stem cell | 5.74e-09 | 6 |
stratified epithelial stem cell | 5.74e-09 | 6 |
surface ectodermal cell | 5.74e-09 | 6 |
mammary gland epithelial cell | 4.04e-08 | 4 |
corneal epithelial cell | 4.07e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.09e-13 | 160 |
endoderm | 1.09e-13 | 160 |
presumptive endoderm | 1.09e-13 | 160 |
lower respiratory tract epithelium | 1.04e-11 | 3 |
epithelium of bronchus | 1.04e-11 | 3 |
urothelium | 6.84e-11 | 5 |
tongue | 8.18e-11 | 3 |
gustatory system | 8.18e-11 | 3 |
future tongue | 8.18e-11 | 3 |
transitional epithelium | 4.45e-09 | 6 |
surface structure | 2.80e-08 | 99 |
mammary gland | 4.04e-08 | 4 |
mammary bud | 4.04e-08 | 4 |
mammary ridge | 4.04e-08 | 4 |
mammary placode | 4.04e-08 | 4 |
jaw skeleton | 5.66e-08 | 4 |
splanchnocranium | 5.66e-08 | 4 |
tracheobronchial tree | 5.92e-08 | 15 |
lower respiratory tract | 5.92e-08 | 15 |
respiratory tract | 1.18e-07 | 54 |
placenta | 1.21e-07 | 4 |
allantois | 1.21e-07 | 4 |
bronchus | 3.73e-07 | 5 |
urinary system structure | 3.98e-07 | 47 |
renal system | 6.28e-07 | 48 |