FFCP PHASE1:Hg19::chr1:155917202..155917224,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9181 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=682 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_BC027722_5end | |||
|description=CAGE_peak_7_at_ARHGEF2_5end | |||
|id=chr1:155917202..155917224,- | |||
|ontology_enrichment_celltype=CL:0002057!1.30e-09!42;CL:0000860!8.62e-09!45;CL:0002194!2.62e-08!63;CL:0000576!2.62e-08!63;CL:0000040!2.62e-08!63;CL:0000559!2.62e-08!63;CL:0000839!9.20e-08!70;CL:0002009!1.29e-07!65;CL:0000557!1.32e-07!71;CL:0000766!5.07e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-15;33!CL:0002057;1.03e-15;33!CL:0000473;3.14e-14;39!CL:0000234;3.14e-14;39!CL:0000576;3.44e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.42e-13,48;CL:0000234,1.42e-13,48;CL:0000860,3.61e-12,42;CL:0002057,3.61e-12,42;CL:0002194,4.49e-10,59;CL:0000576,4.49e-10,59;CL:0000040,4.49e-10,59;CL:0000559,4.49e-10,59;CL:0002009,2.16e-09,61;CL:0000766,3.13e-09,72;CL:0000839,3.14e-09,66;CL:0000557,6.28e-09,67;CL:0000763,1.48e-08,108;CL:0000049,1.48e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.11e-07,76;UBERON:0001474,5.94e-07,82 | |||
|phase1_expression=0.726713517082227,2.35510576280081,1.26858963686374,1.0007329835313,0.446961094427288,0,0,0.631719873426831,1.56711376919903,0.245733936501509,0.697801167972428,0.436882744260345,0,0.247532705920093,0,2.6893005858071,2.41077811209591,0.730310090387373,1.46379839637152,0.369363174230364,0.204000691244253,0.940364164434263,0,0.410623275218653,0.125542639594803,0.534893840235659,0.164201178899891,0.472264687882075,0,0,0,0,0,0.369754010166788,0.619737604642413,0.710846162437108,0,0,1.20326668482085,0.651032612147555,0.895661896959697,1.94336199611388,0,1.74477886535478,2.26725566213286,2.91100873425379,2.09186133215116,1.23350366406548,3.40677007984614,0.575384784644301,1.0246428261164,0.709446689665756,5.17118521104928,7.74581620300591,6.77132432971709,6.02375486536335,4.36649840092553,1.12361742222542,3.36692281607993,2.88836124368484,5.11469700639233,1.31940520074686,2.39356389145958,0.426224750532694,6.09439401120026,2.8369261234557,6.85104473895132,2.26123798731069,4.69334626578181,1.08594422352558,2.42159801053347,4.05105399586321,1.89877432464531,0.633765858935825,0.637812899895131,0.209658645508376,0.44931452458598,1.35159203557356,0.64290234678832,0,0.59675003159727,0.547992461293902,0,0,0.889509253863555,0.853460445133014,0.400395987036012,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0.790152254325231,0.590129310341499,0,0.411202997999018,0.83593247695339,0,0,1.94826728407911,0.891283655081389,0.589211814949674,0.443067789167242,0.270803863765016,1.15282187753108,0.650296737799391,1.64437904603676,1.65810010671509,0.869409257205157,0.593146252648242,1.07016331235885,0,0.339928028092699,0,0.34362744548263,0,0,0,0,0.301150238155546,0.383959833463255,0,0,0,0.604820229674197,0.534880391567015,0.434473211648397,0,1.34140171940727,1.02290049474824,1.80719576192283,1.00267582127178,1.44846518960824,0.795285947051099,0.486634870302636,0.378139268656271,0.443458794925128,0.263504357079378,0.130979075497713,1.09288586487763,1.11235332835329,0.324547393654683,0.348259474598534,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0.835979866147242,0.516833518338658,0.35576626268671,0.33472061276467,1.61131726843659,0.760272105718513,1.46437234528902,0.735326160691737,0.81014194788176,0.357198913136319,0.44905874525234,0.563057402416611,1.53316637465883,0,0.183201743930407,0,0,0.872188104285069,0.993943903390637,1.51956613997496,1.72131935057184,2.29469296599051,0.354668382198357,0,2.1349799145941,1.97334038733728,0,0.67355336034844,0.326923806226917,0.454072282934794,0,5.15507150034353,0.624320153660641,0,0.298897361103602,0.469737994575059,0.485618833104395,0,0.408308342509787,0.245668634623536,0.723280468230358,1.18800285728205,3.21447008062124,2.73048408581408,2.87447256726495,0.336672227908132,0.375355559615893,0.277064115484183,0.438977620880838,1.22595118319608,0.45071417671979,0.340296549480063,1.07633781413317,1.70845911054854,1.48352330811693,0.300091096084402,0.618315175430633,2.31876486041066,1.67505170698431,2.02531598689519,0.68205903612839,1.26216887122057,1.38074847963449,1.77810662500693,2.84007674013291,0.604512589365842,0.67824236924195,0.773043412653187,0.545492241181669,0.573609190778008,0.121973706129595,0,0.348581828608555,0.310983165046111,0.504641701751257,0.36497735907583,0,0,4.14404764057442,0.464367928031979,0,0.591534000199219,0.168584690078102,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0.769494313892781,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,0.441463099414651,0.245976877086227,0.343135620597051,0.768251997860379,0,0.100528972411631,0.0925884451585296,2.6064664424826,1.03993478527958,1.44331342025273,0.231860809950154,0.117408694235822,0.577465791044295,1.85194205030644,0.570762456703795,0,0,1.23108503043699,0.468008530278475,0.445893486866185,0,0.503946384596579,0,0.53735113621709,0.290633938513962,0.766765358330422,2.46331618947972,0.528290604079356,0.621984346622316,1.15295962733569,0.88369703398466,0.317489471460845,1.52795370223311,1.17217447210047,0,0.308482478109971,1.20137223137567,1.42913216315289,1.34557301214433,0,0.5867062865676,0.646358578788889,0,2.535908257668,0.531876233169741,3.12022310734098,0.514414748524284,0,0.532844358032199,1.14382394926518,3.25572963234866,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,1.74306691720059,0.499864955910285,2.43247561282381,2.51128545716063,12.6500363689819,2.63587341040741,4.59447743336456,0,0.868687840005475,0.61642896765115,0.716243852959582,0.336255431980582,0.591092280605782,0.215627574859517,0.77005821767849,0.76228387266739,0,0.773288812777695,0.670065061337395,1.27587750330633,5.24304916763028,14.9580729602012,0.414415513436035,0,0,0.271265023699736,0.623912584592421,1.60586089917446,2.52323864054295,0.937131319941706,0.300946099727719,4.5481500811197,1.03473071292505,0,0.368738337083406,0.60818530127658,0.587403472388222,3.43143423810856,0.82707210449155,1.94142780736755,0.213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| |||
|short_description=p7@ARHGEF2 | |||
}} |
Revision as of 21:20, 10 January 2014
Short description: | p7@ARHGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARHGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_BC027722_5end |
EntrezGene: | ARHGEF2 |
HGNC: | 682 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.42e-13 | 48 |
phagocyte | 1.42e-13 | 48 |
classical monocyte | 3.61e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.61e-12 | 42 |
monopoietic cell | 4.49e-10 | 59 |
monocyte | 4.49e-10 | 59 |
monoblast | 4.49e-10 | 59 |
promonocyte | 4.49e-10 | 59 |
macrophage dendritic cell progenitor | 2.16e-09 | 61 |
myeloid leukocyte | 3.13e-09 | 72 |
myeloid lineage restricted progenitor cell | 3.14e-09 | 66 |
granulocyte monocyte progenitor cell | 6.28e-09 | 67 |
myeloid cell | 1.48e-08 | 108 |
common myeloid progenitor | 1.48e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.11e-07 | 76 |
bone element | 5.94e-07 | 82 |