FFCP PHASE1:Hg19::chr1:155948361..155948379,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9181 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=682 | |||
|TSSclassifier=strong | |||
|UniProt=Q92974 | |||
|association_with_transcript=-25bp_to_NM_001162383,NM_001162384,uc001fms.2,uc001fmt.2_5end | |||
|description=CAGE_peak_4_at_ARHGEF2_5end | |||
|id=chr1:155948361..155948379,- | |||
|ontology_enrichment_celltype=CL:0002078!1.66e-12!44;CL:0000115!5.41e-12!35;CL:0000763!6.71e-12!112;CL:0000049!6.71e-12!112;CL:0002032!1.53e-08!165;CL:0000837!1.53e-08!165;CL:0000988!2.18e-08!182;CL:0002139!9.62e-08!24;CL:0000037!1.30e-07!172;CL:0000566!1.30e-07!172;CL:0000766!5.47e-07!76;CL:0000839!9.33e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.70e-10;36!CL:0002078;1.14e-08;45!CL:0002139;5.37e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,1.35e-12,45;CL:0000115,4.61e-12,36;CL:0000763,5.27e-12,108;CL:0000049,5.27e-12,108;CL:0002032,1.59e-08,161;CL:0000837,1.59e-08,161;CL:0000988,2.95e-08,177;CL:0002139,9.62e-08,24;CL:0000037,1.37e-07,168;CL:0000766,4.54e-07,72;CL:0000839,7.54e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.28e-10!112;UBERON:0002390!2.60e-08!102;UBERON:0003061!2.60e-08!102;UBERON:0003081!4.98e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.14e-10,108;UBERON:0002390,2.30e-08,98;UBERON:0003061,2.30e-08,98;UBERON:0002405,2.16e-07,93 | |||
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| |||
|short_description=p4@ARHGEF2 | |||
}} |
Revision as of 21:20, 10 January 2014
Short description: | p4@ARHGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_NM_001162383, NM_001162384, uc001fms.2, uc001fmt.2_5end |
EntrezGene: | ARHGEF2 |
HGNC: | 682 |
UniProt: | Q92974 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 1.35e-12 | 45 |
endothelial cell | 4.61e-12 | 36 |
myeloid cell | 5.27e-12 | 108 |
common myeloid progenitor | 5.27e-12 | 108 |
hematopoietic oligopotent progenitor cell | 1.59e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-08 | 161 |
hematopoietic cell | 2.95e-08 | 177 |
endothelial cell of vascular tree | 9.62e-08 | 24 |
hematopoietic stem cell | 1.37e-07 | 168 |
myeloid leukocyte | 4.54e-07 | 72 |
myeloid lineage restricted progenitor cell | 7.54e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.14e-10 | 108 |
hematopoietic system | 2.30e-08 | 98 |
blood island | 2.30e-08 | 98 |
immune system | 2.16e-07 | 93 |