FFCP PHASE1:Hg19::chr1:186275518..186275574,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C287 | |||
|description=CAGE_peak_at_chr1:186275518..186275574,+ | |||
|id=chr1:186275518..186275574,+ | |||
|ontology_enrichment_celltype=CL:0000153!3.71e-09!9;CL:0000447!3.71e-09!9;CL:0002570!4.97e-09!8;CL:0000327!3.91e-08!14;CL:0000667!1.65e-07!6;CL:0000058!1.65e-07!6;CL:0000138!1.65e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.08e-17;9!CL:0000447;1.08e-17;9!CL:0000138;5.55e-14;6!CL:0000327;3.81e-10;15!CL:0000135;4.20e-10;3!CL:0000388;4.20e-10;3!CL:0000499;8.05e-10;28!CL:0002570;1.22e-09;8!CL:0002549;2.18e-07;2!CL:0002575;6.78e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.06e-17,9;CL:0000447,1.06e-17,9;CL:0000058,5.35e-14,6;CL:0000138,5.35e-14,6;CL:0000327,3.76e-10,15;CL:0000135,4.34e-10,3;CL:0000388,4.34e-10,3;CL:0000499,8.07e-10,28;CL:0002570,1.41e-09,8;CL:0002549,2.22e-07,2;CL:0002575,8.65e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;3.28e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.08e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.85e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.38e-14!115;UBERON:0001013!7.70e-12!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.90e-13;14!UBERON:0007846;4.20e-10;3!UBERON:0000043;4.20e-10;3!UBERON:0007845;4.20e-10;3!UBERON:0005629;2.18e-07;2!UBERON:0005358;2.18e-07;2!UBERON:0001886;2.18e-07;2!UBERON:0004086;2.18e-07;2!UBERON:0005282;2.18e-07;2!UBERON:0005281;2.18e-07;2!UBERON:0005090;2.76e-07;2!UBERON:0001630;2.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.62e-13,14;UBERON:0007846,4.34e-10,3;UBERON:0000043,4.34e-10,3;UBERON:0007845,4.34e-10,3;UBERON:0007023,1.72e-07,114;UBERON:0005629,2.22e-07,2;UBERON:0005358,2.22e-07,2;UBERON:0001886,2.22e-07,2;UBERON:0004086,2.22e-07,2;UBERON:0005282,2.22e-07,2;UBERON:0005281,2.22e-07,2;UBERON:0005090,3.04e-07,2;UBERON:0001630,3.04e-07,2 | |||
|phase1_expression=0.363356758541113,2.78330681058278,0.140954404095971,0,0.893922188854576,0.872338524100369,0,80.2284239252075,1.30592814099919,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0.294605907474837,0,0,1.79327847615945,1.43065282315866,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.0477882954585,1.50401373190767,52.1447468258965,143.946756416249,117.279003742935,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0,0,3.48122083583342,5.76175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,79.8556719377534,58.9696330006576,42.5368732810611,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,5.917119267892,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,1.88215698667853,0,0,0,0,0.215627574859517,0,0,0,0.773288812777695,0,0,0,0,0,0.858840442033979,0,0,0.207970861530807,0,0,0,0,0,1.03473071292505,0,0,0,2.93701736194111,1.02943027143257,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,1.77561725313127,2.62806899244189,0,3.48631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.17065003664728,0,0,0,0,0,0,0.308097234229289,1.68854042198743,0,0.107420244868274,0.435050081742686,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,25.5440238710174,49.7235288369452,0,0,0,0,0,8.28465446835657,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1601788795672,0,0.111443384277478,0,0,0,0,0.994147647766298,0,0,0,0,15.5413430835834,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.278304294485554,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,0,0.296521128680622,0,0,0.202203398942031,5.61804353109152,0,0,0,0,0,0,0,5.81316532582089,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0.580537987734511,0.219267951258557,0.164230914106418,0.581934098930517,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,2.29160424011684,0,1.99679000498991,7.72606886645828,0.669514372325618,0.604651252380536,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,13.579211201094,0,0,0,0,0,0,0.082092520749339,0,0,34.8794316153836,2.65013777824443,0,0,0.171086837884329,0,1.49502377594773,0,2.89967338743037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,19.2538695724068,1.16856654923612,12.2057289530575,0.568209015825267,0.754703705257725,9.7879234375619,0.686520205190771,1.81477108515887,16.7872176629403,0,0,0,0,3.7323558705677,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0,0,6.45074531906083,0.175871244359621,0,0,0.336283722218824,3.03482802118316,0,0,0,0,0.0679697329768317,0,0,0,0.39246546425257,0,0,0,0,0,1.78691360441641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,3.2852098193999,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0.245148321753905,0,0,0,1.2679671827502,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,1.48798007266701,25.8818352033594,3.46101249699031,0,0,0,0,0,0,0,1.06090177505535,0.803892390468535,0,0,1.70587185520785,0,0.193766729508018,0.558672428662721,0,0.12729431655633,0,1.52401723527873,0,0.134704106029175,0.573777643141411,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,1.40891655513718,0 | |||
|short_description=p@chr1:186275518..186275574,+ | |||
}} |
Revision as of 22:53, 10 January 2014
Short description: | p@chr1:186275518..186275574, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186275518..186275574, + |
Coexpression cluster: | C287_Hepatocyte_Chondrocyte_Adipocyte_Synoviocyte_liver_tenocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.06e-17 | 9 |
carbohydrate secreting cell | 1.06e-17 | 9 |
chondroblast | 5.35e-14 | 6 |
chondrocyte | 5.35e-14 | 6 |
extracellular matrix secreting cell | 3.76e-10 | 15 |
fibrocyte | 4.34e-10 | 3 |
tendon cell | 4.34e-10 | 3 |
stromal cell | 8.07e-10 | 28 |
mesenchymal stem cell of adipose | 1.41e-09 | 8 |
fibroblast of choroid plexus | 2.22e-07 | 2 |
central nervous system pericyte | 8.65e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.62e-13 | 14 |
dense regular connective tissue | 4.34e-10 | 3 |
tendon | 4.34e-10 | 3 |
regular connective tissue | 4.34e-10 | 3 |
adult organism | 1.72e-07 | 114 |
vascular plexus | 2.22e-07 | 2 |
ventricle of nervous system | 2.22e-07 | 2 |
choroid plexus | 2.22e-07 | 2 |
brain ventricle | 2.22e-07 | 2 |
ventricular system of brain | 2.22e-07 | 2 |
ventricular system of central nervous system | 2.22e-07 | 2 |
muscle structure | 3.04e-07 | 2 |
muscle organ | 3.04e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.85e-07 | 2 |