FFCP PHASE1:Hg19::chr1:186277273..186277285,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C287 | |||
|description=CAGE_peak_at_chr1:186277273..186277285,+ | |||
|id=chr1:186277273..186277285,+ | |||
|ontology_enrichment_celltype=CL:0000153!1.08e-11!9;CL:0000447!1.08e-11!9;CL:0000667!1.73e-09!6;CL:0000058!1.73e-09!6;CL:0000138!1.73e-09!6;CL:0000136!3.68e-09!15;CL:0002570!5.61e-09!8;CL:0000327!5.26e-07!14;CL:0000135!6.34e-07!3;CL:0000386!6.34e-07!3;CL:0000388!6.34e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.30e-28;9!CL:0000447;1.30e-28;9!CL:0000138;1.93e-22;6!CL:0000327;8.44e-17;15!CL:0000499;6.01e-14;28!CL:0000569;4.82e-12;4!CL:0002570;1.70e-10;8!CL:0000214;3.61e-08;3!CL:0000135;7.01e-08;3!CL:0000388;7.01e-08;3!CL:0002582;1.51e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.77e-28,9;CL:0000447,1.77e-28,9;CL:0000058,2.63e-22,6;CL:0000138,2.63e-22,6;CL:0000327,1.01e-16,15;CL:0000499,6.73e-14,28;CL:0000569,4.74e-12,4;CL:0000011,4.74e-12,4;CL:0002570,1.77e-10,8;CL:0000136,3.28e-08,15;CL:0000214,3.68e-08,3;CL:0000135,6.89e-08,3;CL:0000388,6.89e-08,3;CL:0002582,1.01e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000011;4.82e-12;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!1.09e-10!14;UBERON:0007023!2.48e-07!115;UBERON:0000043!6.34e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.90e-13;14!UBERON:0006915;3.61e-08;3!UBERON:0007616;3.61e-08;3!UBERON:0002217;3.61e-08;3!UBERON:0002018;3.61e-08;3!UBERON:0007846;7.01e-08;3!UBERON:0000043;7.01e-08;3!UBERON:0007845;7.01e-08;3!UBERON:0002107;7.06e-07;19!UBERON:0006925;7.06e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,6.23e-13,14;UBERON:0006915,3.68e-08,3;UBERON:0007616,3.68e-08,3;UBERON:0002217,3.68e-08,3;UBERON:0002018,3.68e-08,3;UBERON:0007846,6.89e-08,3;UBERON:0000043,6.89e-08,3;UBERON:0007845,6.89e-08,3;UBERON:0002107,6.93e-07,19;UBERON:0006925,6.93e-07,19;UBERON:0008836,6.93e-07,19 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0.140954404095971,1.0007329835313,0.446961094427288,0,0,25.2687949370732,0.522371256399677,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.896639238079726,1.04047478047903,0,0,0,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39741796199872,1.00267582127178,20.2785126545153,22.2680065174308,34.0644409211845,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,26.6185573125845,19.6565443335525,17.7236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0,0,0,0,0.604780586659361,0.248107807818777,0,0,0,0,0,0,0,0.710246901252508,1.64254312027618,0,1.39452454151951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,8.02209014131124,14.8182701831956,0,0,0,0,0,3.01260162485693,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24873719888493,0,0,0,0,0,0,0,0,0,0,0,3.38721580026819,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,1.39010475182674,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0.387025325156341,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.458320848023367,0,0.199679000498991,3.86303443322914,0,0.134366944973453,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,11.4310742268904,1.32506888912221,0,0,0.171086837884329,0,0.427149650270779,0.157204305099666,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.70156218764681,0,4.43844689202091,0,0.251567901752575,4.44905610798268,1.14420034198462,1.36107831386915,8.23817163088736,0,0,0,0,3.31764966272684,0,0,0,0,0,0,0,0,0,0,1.37358282073117,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,1.95059333026869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,12.4787419730483,1.29787968637137,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0.639701945702943,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p@chr1:186277273..186277285,+ | |||
}} |
Revision as of 22:53, 10 January 2014
Short description: | p@chr1:186277273..186277285, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186277273..186277285, + |
Coexpression cluster: | C287_Hepatocyte_Chondrocyte_Adipocyte_Synoviocyte_liver_tenocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.77e-28 | 9 |
carbohydrate secreting cell | 1.77e-28 | 9 |
chondroblast | 2.63e-22 | 6 |
chondrocyte | 2.63e-22 | 6 |
extracellular matrix secreting cell | 1.01e-16 | 15 |
stromal cell | 6.73e-14 | 28 |
cardiac mesenchymal cell | 4.74e-12 | 4 |
migratory trunk neural crest cell | 4.74e-12 | 4 |
mesenchymal stem cell of adipose | 1.77e-10 | 8 |
fat cell | 3.28e-08 | 15 |
synovial cell | 3.68e-08 | 3 |
fibrocyte | 6.89e-08 | 3 |
tendon cell | 6.89e-08 | 3 |
visceral preadipocyte | 1.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 6.23e-13 | 14 |
stratified squamous epithelium | 3.68e-08 | 3 |
layer of synovial tissue | 3.68e-08 | 3 |
synovial joint | 3.68e-08 | 3 |
synovial membrane of synovial joint | 3.68e-08 | 3 |
dense regular connective tissue | 6.89e-08 | 3 |
tendon | 6.89e-08 | 3 |
regular connective tissue | 6.89e-08 | 3 |
liver | 6.93e-07 | 19 |
digestive gland | 6.93e-07 | 19 |
liver bud | 6.93e-07 | 19 |