FFCP PHASE1:Hg19::chr10:20568710..20568737,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr10:20568710..20568737,+ | |||
|id=chr10:20568710..20568737,+ | |||
|ontology_enrichment_celltype=CL:0002194!7.39e-19!63;CL:0000576!7.39e-19!63;CL:0000040!7.39e-19!63;CL:0000559!7.39e-19!63;CL:0002009!1.59e-18!65;CL:0000766!4.67e-17!76;CL:0000557!4.33e-16!71;CL:0000839!7.69e-16!70;CL:0002057!9.90e-16!42;CL:0000860!8.58e-14!45;CL:0000763!8.07e-09!112;CL:0000049!8.07e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.62e-19;6!CL:0000473;2.48e-11;39!CL:0000234;2.48e-11;39!CL:0002615;7.40e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.66e-19,6;CL:0002194,4.89e-16,59;CL:0000576,4.89e-16,59;CL:0000040,4.89e-16,59;CL:0000559,4.89e-16,59;CL:0000766,1.46e-15,72;CL:0002009,2.35e-15,61;CL:0000473,3.84e-15,48;CL:0000234,3.84e-15,48;CL:0000839,7.84e-14,66;CL:0000557,1.48e-13,67;CL:0002615,1.27e-10,3;CL:0000763,1.23e-08,108;CL:0000049,1.23e-08,108;CL:0000860,6.41e-07,42;CL:0002057,6.41e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.83e-12!115;UBERON:0002371!2.59e-12!80;UBERON:0001474!9.14e-11!86;UBERON:0002346!3.66e-10!90;UBERON:0002390!6.21e-10!102;UBERON:0003061!6.21e-10!102;UBERON:0001049!2.63e-09!57;UBERON:0005068!2.63e-09!57;UBERON:0006241!2.63e-09!57;UBERON:0007135!2.63e-09!57;UBERON:0003075!4.98e-09!86;UBERON:0007284!4.98e-09!86;UBERON:0002405!1.21e-08!115;UBERON:0002193!1.64e-08!112;UBERON:0004765!2.50e-08!101;UBERON:0001434!2.50e-08!101;UBERON:0002780!3.69e-08!41;UBERON:0001890!3.69e-08!41;UBERON:0006240!3.69e-08!41;UBERON:0003080!9.27e-08!42;UBERON:0002020!2.92e-07!34;UBERON:0003528!2.92e-07!34;UBERON:0002616!3.38e-07!59;UBERON:0001893!6.86e-07!34;UBERON:0005743!7.71e-07!86;UBERON:0003056!8.49e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.83e-14;6!UBERON:0002358;7.83e-14;6!UBERON:0003684;7.83e-14;6!UBERON:0001178;7.83e-14;6!UBERON:0004457;4.33e-09;9!UBERON:0000042;4.33e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.45e-13,6;UBERON:0002358,2.45e-13,6;UBERON:0003684,2.45e-13,6;UBERON:0001178,2.45e-13,6;UBERON:0002371,2.15e-11,76;UBERON:0001474,3.20e-10,82;UBERON:0004765,6.60e-09,90;UBERON:0002390,9.27e-09,98;UBERON:0003061,9.27e-09,98;UBERON:0002405,1.79e-08,93;UBERON:0001434,1.43e-07,100;UBERON:0002193,1.63e-07,108 | |||
|phase1_expression=0.54503513781167,2.78330681058278,1.12763523276777,3.00219895059391,4.02264984984559,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,2.00544447470142,1.30206522429511,1.11957737119962,0.647787332037959,0,1.45398238779565,0.377875943688809,0,0.697287110717054,0.411167888021826,0.309706370895104,1.7261543539329,0.256160706529101,0.709446689665756,1.37898272294647,0,0,0.941211697713023,0.818718450173537,0.674170453335254,1.22433556948361,0.320929027076094,1.91801137739712,0.989553900560148,0.797854630486527,0,0.580418477257168,2.26954089876456,0,1.25624332628372,1.5644487552606,0.868755378820466,1.81619850790011,0.368277635987565,0.632924774881769,0.422510572623884,0.850417199860174,0.209658645508376,0.561643155732475,0.450530678524519,0.16072558669708,0,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.724232594804119,0,2.91980922181582,0.0945348171640679,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0,1.0447784237956,1.46253756570752,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0.397589304964456,0.348581828608555,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0.686271241194102,0,0,0.301586917234893,0,0,0,0,0.34779121492523,0.234817388471643,0,0,0,1.58040879591855,0,1.23108503043699,1.40402559083543,1.48631162288728,0,0,0,0.179117045405697,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,1.04007436911366,0,0,0,1.14382394926518,0,0,0,0.355391948742546,0,0,0,2.89921674427965,2.43247561282381,2.00902836572851,10.5416969741516,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0.256686072559497,0,0,0,0,1.27587750330633,6.74106321552464,26.9245313283622,0.828831026872071,0.24538298343828,0,0,0,1.42743191037729,0.473107245101804,0.35142424497814,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0,0,0.604780586659361,0,0.460385919864187,2.24528075546459,0.768834895534206,1.02341449813341,2.0911009748669,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0.192190067365106,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,1.33441135746677,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0.677167111206413,0,0.403599414382095,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0,0,0.472775363535873,0,0,0.520874984799877,0,0.482385754501632,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,1.02547850262301,0.69169171316418,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,1.60515529459758,0.702793337176017,0,0,0,0,1.20990716048664,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0.284609546029793,0.416024019039416,0.173559738335131,0,0,0.17472666824203,0.51595809741485,0,0,0,0.387956065953678,0.0882561266915003,1.80784592624426,0,0,0.0633107959558787,0,0,0.426905989478705,0.599428828746391,0,0,0,0,0,0.707082103850386,0.543616824294456,0.313808538937,0,0,0,1.09524303113594,0,0.859530882839914,0,1.39641200636127,1.60412296808179,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0,0.0984274815147488,0,0.795229689809303,1.36203406111576,0,0,1.24632101408756,0.2249738915515,0,0.121499113316049,0,0.315222829196793,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,1.63293680054705,0,0,0,0,0.146552233678082,0,0.387848869084652,0.92562821219883,0,0,0.320362237703084,0.314408610199332,0.828478110694391,0.992332043623902,0,0,0.638341257770182,0,0,0,0,0,0,2.80660409274515,0.876336514945499,0,0.665574309221114,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0,0.318593534327405,0,0,0,0.53168342911599,0.521745061811734,0.601030435988874,0.761610424337591,0,0,0.322231671127465,0,0.796191777397232,0,0.343395705182793,0.336749488765919,0,0,0.428883182749851,0,0,0.926089897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| |||
|short_description=p@chr10:20568710..20568737,+ | |||
}} |
Revision as of 02:04, 11 January 2014
Short description: | p@chr10:20568710..20568737, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr10:20568710..20568737, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.66e-19 | 6 |
monopoietic cell | 4.89e-16 | 59 |
monocyte | 4.89e-16 | 59 |
monoblast | 4.89e-16 | 59 |
promonocyte | 4.89e-16 | 59 |
myeloid leukocyte | 1.46e-15 | 72 |
macrophage dendritic cell progenitor | 2.35e-15 | 61 |
defensive cell | 3.84e-15 | 48 |
phagocyte | 3.84e-15 | 48 |
myeloid lineage restricted progenitor cell | 7.84e-14 | 66 |
granulocyte monocyte progenitor cell | 1.48e-13 | 67 |
adipocyte of omentum tissue | 1.27e-10 | 3 |
myeloid cell | 1.23e-08 | 108 |
common myeloid progenitor | 1.23e-08 | 108 |
classical monocyte | 6.41e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.41e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.45e-13 | 6 |
peritoneum | 2.45e-13 | 6 |
abdominal cavity | 2.45e-13 | 6 |
visceral peritoneum | 2.45e-13 | 6 |
bone marrow | 2.15e-11 | 76 |
bone element | 3.20e-10 | 82 |
skeletal element | 6.60e-09 | 90 |
hematopoietic system | 9.27e-09 | 98 |
blood island | 9.27e-09 | 98 |
immune system | 1.79e-08 | 93 |
skeletal system | 1.43e-07 | 100 |
hemolymphoid system | 1.63e-07 | 108 |