FFCP PHASE1:Hg19::chr10:120116368..120116373,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-246bp_to_ENST00000445161_5end | |||
|description=CAGE_peak_1_at_ENST00000445161_5end | |||
|id=chr10:120116368..120116373,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.08e-29!2;CL:0000167!8.63e-16!1;CL:0000164!8.63e-16!1;CL:0000502!8.63e-16!1;CL:0000172!8.63e-16!1;CL:0000173!8.63e-16!1;CL:0002351!8.63e-16!1;CL:0000312!1.69e-12!5;CL:0000240!1.43e-10!6;CL:0000311!1.43e-10!6;CL:0000079!1.43e-10!6;CL:0000237!1.43e-10!6;CL:0000036!1.43e-10!6;CL:0000357!1.43e-10!6;CL:0000114!1.43e-10!6;CL:0002535!2.87e-08!2;CL:0000362!3.77e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.54e-50;2!CL:0000242;4.54e-50;2!CL:0000167;4.61e-26;1!CL:0000164;4.61e-26;1!CL:0000502;4.61e-26;1!CL:0000172;4.61e-26;1!CL:0000173;4.61e-26;1!CL:0000312;9.44e-21;5!CL:0000240;1.78e-17;6!CL:0000311;1.78e-17;6!CL:0000079;1.78e-17;6!CL:0000237;1.78e-17;6!CL:0000362;5.37e-12;9!CL:0002159;4.74e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.00e-50,2;CL:0000167,4.61e-26,1;CL:0000164,4.61e-26,1;CL:0000502,4.61e-26,1;CL:0000172,4.61e-26,1;CL:0000173,4.61e-26,1;CL:0002351,4.61e-26,1;CL:0000312,8.98e-21,5;CL:0000240,1.71e-17,6;CL:0000311,1.71e-17,6;CL:0000079,1.71e-17,6;CL:0000237,1.71e-17,6;CL:0000036,1.71e-17,6;CL:0000357,1.71e-17,6;CL:0000114,1.71e-17,6;CL:0000362,5.22e-12,9;CL:0002159,4.66e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002351;4.61e-26;1!UBERON:0004874;8.64e-26;1!CL:0000357;1.78e-17;6!CL:0000114;1.78e-17;6!UBERON:0007297;6.85e-14;2 | |||
|ontology_enrichment_disease=DOID:4430!8.63e-16!1;DOID:0050619!9.99e-16!1;DOID:1357!9.99e-16!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;4.61e-26;1!DOID:0050619;5.93e-26;1!DOID:1357;5.93e-26;1!DOID:5409;1.36e-07;4!DOID:0050615;3.39e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,4.61e-26,1;DOID:0050619,5.93e-26,1;DOID:1357,5.93e-26,1;DOID:5409,1.40e-07,4;DOID:0050615,3.44e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0003135!5.98e-21!11;UBERON:0006947!3.66e-20!3;UBERON:0004054!3.66e-20!3;UBERON:0001301!5.56e-16!1;UBERON:0001764!9.99e-16!1;UBERON:0001825!9.99e-16!1;UBERON:0000989!1.34e-15!1;UBERON:0008811!1.34e-15!1;UBERON:0006258!1.34e-15!1;UBERON:0005876!1.34e-15!1;UBERON:0004874!1.34e-15!1;UBERON:0001000!1.54e-15!1;UBERON:0005352!1.54e-15!1;UBERON:0005904!2.22e-15!4;UBERON:0001154!2.75e-15!1;UBERON:0001153!2.75e-15!1;UBERON:0003101!1.23e-10!22;UBERON:0000079!1.23e-10!22;UBERON:0006955!2.87e-08!2;UBERON:0004801!2.87e-08!2;UBERON:0003133!2.33e-07!48;UBERON:0001155!3.55e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.37e-34;3!UBERON:0004054;8.37e-34;3!UBERON:0001301;2.45e-26;1!UBERON:0001764;5.93e-26;1!UBERON:0001825;5.93e-26;1!UBERON:0000989;8.64e-26;1!UBERON:0008811;8.64e-26;1!UBERON:0005904;1.19e-25;4!UBERON:0001000;1.26e-25;1!UBERON:0005352;1.26e-25;1!UBERON:0003135;7.49e-21;11!UBERON:0000058;6.77e-11;10!UBERON:0003101;8.48e-11;22!UBERON:0000079;8.48e-11;22!UBERON:0001003;1.42e-07;15!UBERON:0007376;1.42e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.70e-34,3;UBERON:0004054,7.70e-34,3;UBERON:0001301,2.16e-26,1;UBERON:0001764,5.93e-26,1;UBERON:0001825,5.93e-26,1;UBERON:0000989,9.79e-26,1;UBERON:0008811,9.79e-26,1;UBERON:0006258,9.79e-26,1;UBERON:0005876,9.79e-26,1;UBERON:0004874,9.79e-26,1;UBERON:0005904,1.11e-25,4;UBERON:0001000,1.26e-25,1;UBERON:0005352,1.26e-25,1;UBERON:0003135,7.49e-21,11;UBERON:0003101,8.48e-11,22;UBERON:0000079,8.48e-11,22;UBERON:0004876,5.06e-10,11;UBERON:0001003,1.40e-07,15;UBERON:0007376,1.40e-07,15;UBERON:0007383,1.40e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8221201606871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45519011750515,0,0,0,0,0,0,0,0,0,0,0,14.9867169858202,2.75349954360568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7325348801167,0,0,0.308696632431779,0,0,0,6.12759022464227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@ENST00000445161 | |||
}} |
Revision as of 05:14, 11 January 2014
Short description: | p1@ENST00000445161 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000445161_5end |
Coexpression cluster: | NA |
Association with transcript: | -246bp_to_ENST00000445161_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.00e-50 | 2 |
peptide hormone secreting cell | 4.61e-26 | 1 |
enteroendocrine cell | 4.61e-26 | 1 |
type D enteroendocrine cell | 4.61e-26 | 1 |
somatostatin secreting cell | 4.61e-26 | 1 |
pancreatic D cell | 4.61e-26 | 1 |
progenitor cell of endocrine pancreas | 4.61e-26 | 1 |
keratinocyte | 8.98e-21 | 5 |
stratified squamous epithelial cell | 1.71e-17 | 6 |
keratin accumulating cell | 1.71e-17 | 6 |
stratified epithelial cell | 1.71e-17 | 6 |
keratinizing barrier epithelial cell | 1.71e-17 | 6 |
epithelial fate stem cell | 1.71e-17 | 6 |
stratified epithelial stem cell | 1.71e-17 | 6 |
surface ectodermal cell | 1.71e-17 | 6 |
epidermal cell | 5.22e-12 | 9 |
general ecto-epithelial cell | 4.66e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 7.70e-34 | 3 |
internal male genitalia | 7.70e-34 | 3 |
epididymis | 2.16e-26 | 1 |
maxillary sinus | 5.93e-26 | 1 |
paranasal sinus | 5.93e-26 | 1 |
penis | 9.79e-26 | 1 |
intromittent organ | 9.79e-26 | 1 |
lateral plate mesenchyme | 9.79e-26 | 1 |
undifferentiated genital tubercle | 9.79e-26 | 1 |
somatopleure | 9.79e-26 | 1 |
duct of male reproductive system | 1.11e-25 | 4 |
vas deferens | 1.26e-25 | 1 |
spermatic cord | 1.26e-25 | 1 |
male reproductive organ | 7.49e-21 | 11 |
male organism | 8.48e-11 | 22 |
male reproductive system | 8.48e-11 | 22 |
urogenital ridge | 5.06e-10 | 11 |
skin epidermis | 1.40e-07 | 15 |
outer epithelium | 1.40e-07 | 15 |
enveloping layer of ectoderm | 1.40e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 4.61e-26 | 1 |
paranasal sinus cancer | 5.93e-26 | 1 |
maxillary sinus cancer | 5.93e-26 | 1 |
lung small cell carcinoma | 1.40e-07 | 4 |
respiratory system cancer | 3.44e-07 | 16 |