FFCP PHASE1:Hg19::chr11:407092..407101,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30575 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=89bp_to_ENST00000527987_5end | |||
|description=CAGE_peak_8_at_SIGIRR_5end | |||
|id=chr11:407092..407101,- | |||
|ontology_enrichment_celltype=CL:0000183!5.83e-09!59;CL:0000359!3.79e-08!32;CL:0000680!3.04e-07!57;CL:0000056!3.04e-07!57;CL:0000355!3.04e-07!57;CL:0000187!4.77e-07!54;CL:0000192!7.03e-07!42;CL:0000514!7.03e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002596;3.86e-11;2!CL:0000359;2.27e-10;32!CL:0000153;8.10e-09;9!CL:0000447;8.10e-09;9!CL:0002573;1.06e-07;2!CL:0002592;1.06e-07;3!CL:0000346;2.05e-07;3!CL:1000428;2.05e-07;3!CL:0000214;2.05e-07;3!CL:0002591;9.87e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.76e-11,32;CL:0002596,4.30e-11,2;CL:0000153,8.49e-09,9;CL:0000447,8.49e-09,9;CL:0000192,6.66e-08,43;CL:0000514,6.66e-08,43;CL:0002573,6.68e-08,2;CL:0002592,9.34e-08,3;CL:0000214,1.03e-07,3;CL:0000346,2.13e-07,3;CL:1000428,2.13e-07,3;CL:0002321,8.46e-07,250;CL:0002591,9.91e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.57e-08!42;UBERON:0003509!1.57e-08!42;UBERON:0004572!1.57e-08!42;UBERON:0003914!4.46e-08!118;UBERON:0000055!1.80e-07!69;UBERON:0002049!1.87e-07!79;UBERON:0007798!1.87e-07!79;UBERON:0004290!2.21e-07!70;UBERON:0004573!5.18e-07!33;UBERON:0004571!5.18e-07!33;UBERON:0001981!5.93e-07!60;UBERON:0007500!5.93e-07!60;UBERON:0004537!5.93e-07!60;UBERON:0006965!5.93e-07!60;UBERON:0002385!9.18e-07!63;UBERON:0001015!9.18e-07!63;UBERON:0000383!9.18e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0005396;3.86e-11;2!UBERON:0003498;1.06e-07;3!UBERON:0005985;1.06e-07;3!UBERON:0001621;1.06e-07;3!UBERON:0004573;1.63e-07;33!UBERON:0004571;1.63e-07;33!UBERON:0006915;2.05e-07;3!UBERON:0007616;2.05e-07;3!UBERON:0002217;2.05e-07;3!UBERON:0002018;2.05e-07;3!UBERON:0000412;2.05e-07;3!UBERON:0001992;2.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,4.30e-11,2;UBERON:0003498,6.12e-10,5;UBERON:0005985,6.12e-10,5;UBERON:0003914,1.07e-09,117;UBERON:0005256,4.06e-09,122;UBERON:0004573,1.99e-08,33;UBERON:0004571,1.99e-08,33;UBERON:0001637,3.97e-08,42;UBERON:0003509,3.97e-08,42;UBERON:0004572,3.97e-08,42;UBERON:0007503,4.90e-08,78;UBERON:0002100,5.96e-08,199;UBERON:0001621,9.34e-08,3;UBERON:0006915,1.03e-07,3;UBERON:0007616,1.03e-07,3;UBERON:0002217,1.03e-07,3;UBERON:0002018,1.03e-07,3;UBERON:0000486,1.96e-07,83;UBERON:0000412,2.13e-07,3;UBERON:0001992,2.13e-07,3;UBERON:0000490,7.08e-07,148;UBERON:0000055,9.62e-07,68 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0.123766352960047,0.994192127183747,0.672325146451775,0,0,0.487932798790507,0,0.408001382488506,0.626909442956176,0.85870796139317,0.273748850145768,0,0,0,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0.512321413058201,0.47296445977717,0,0,0,0.376484679085209,0,0.224723484445085,0,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0.502497330513487,1.0429658368404,0.217188844705117,1.21079900526674,0,0,0.211255286311942,0.212604299965044,0.628975936525128,0.336985893439485,0.150176892841506,0,0.855038231223746,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,1.15877215168659,0.795285947051099,0.486634870302636,0.283604451492204,0.665188192387692,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.825354125820202,0,0.258416759169329,0,0,0.805658634218294,0,0,0.367663080345869,0.81014194788176,0.17859945656816,0.22452937262617,0,1.53316637465883,0,0.916008719652036,2.63560834872127,0,0,0.993943903390637,0,0.132409180813219,0,0.709336764396714,0,0,1.2333377420858,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0.896692083310806,0.117434498643765,0,0.280901613404497,0.204154171254893,0,0.413303124703062,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0.635795703478686,0.300091096084402,0.515262646192195,0.515281080091258,0.930584281657949,0,0,0,0.368199594569197,0.646584227275248,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,1.38134921352481,0,0,0.473227200159376,0.842923450390509,0.964044119533928,0.55146986366197,0.653638332277218,0.237270619111097,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,1.96565443335525,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.469634776943287,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.616339038092582,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0,0.571652865261156,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0.65147236858747,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0,0,2.99161459204025,0,0.736148950314839,0.500170521059677,0.271265023699736,0.831883446123229,0.535286966391485,0.157702415033935,0.35142424497814,0,0,0,0,0,0.260650843404249,0.783204629850962,1.02943027143257,0,0.215714200818617,0.213455115606889,0,0,0,0.496215615637554,0,0.280660094433074,0.256278298511402,0.511707249066704,0,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0,0,0,0,0,0,0.393373244878272,0,0,0.784349769176855,0,0.527758144464379,0,0.170093705276516,0,1.54227252690289,0.541892875087706,1.50506932156456,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0,2.06082023295445,0,0.165018999841176,0,0,1.6068392984416,0.386682873168488,0.308097234229289,0.15350367472613,0.275673144969061,0.214840489736547,0.290033387828457,0.170453254832202,0.267096106940212,0,0,0,0,0,0.31481234683064,0.6970372701606,0,2.12922412126809,1.73986598415015,1.11194531462352,0.429374660225974,0,0.316379424718726,0,0,0.42793898803392,1.27281299170375,2.35484592059769,0,0.274537029736055,0.117812402345686,0.808729926293264,1.58510321173008,2.10629228119491,0,0.731140468893853,0,0.272999822815972,0.141405431953713,3.39024349860728,1.10273068709225,0.66343897524122,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0.845086807596724,0.143411352204052,0.196498082026242,0.35667105148125,0,1.89996871767898,1.64647446479951,0,0.699869440489966,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0.37428108081644,0,0,0,1.98895302764489,0,0,0,0,0.281338832821026,0,0,0.63337622438398,0.19924798825107,0.552567831062295,0,0,0,0,0.179736702294654,0,2.04628948090749,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0.653630781113941,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0.225595660617181,0.588187602953219,0.503464760927528,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.252746318513952,0,0.103688191397247,0.664653872707185,0.661983911750998,0.627865836814451,1.194724297729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| |||
|short_description=p8@SIGIRR | |||
}} |
Revision as of 05:48, 11 January 2014
Short description: | p8@SIGIRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SIGIRR_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_ENST00000527987_5end |
EntrezGene: | SIGIRR |
HGNC: | 30575 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.76e-11 | 32 |
smooth muscle cell of the carotid artery | 4.30e-11 | 2 |
GAG secreting cell | 8.49e-09 | 9 |
carbohydrate secreting cell | 8.49e-09 | 9 |
smooth muscle cell | 6.66e-08 | 43 |
smooth muscle myoblast | 6.66e-08 | 43 |
Schwann cell | 6.68e-08 | 2 |
smooth muscle cell of the coronary artery | 9.34e-08 | 3 |
synovial cell | 1.03e-07 | 3 |
hair follicle dermal papilla cell | 2.13e-07 | 3 |
stem cell of epidermis | 2.13e-07 | 3 |
embryonic cell | 8.46e-07 | 250 |
smooth muscle cell of the pulmonary artery | 9.91e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 4.30e-11 | 2 |
heart blood vessel | 6.12e-10 | 5 |
coronary vessel | 6.12e-10 | 5 |
epithelial tube | 1.07e-09 | 117 |
trunk mesenchyme | 4.06e-09 | 122 |
systemic artery | 1.99e-08 | 33 |
systemic arterial system | 1.99e-08 | 33 |
artery | 3.97e-08 | 42 |
arterial blood vessel | 3.97e-08 | 42 |
arterial system | 3.97e-08 | 42 |
epithelial vesicle | 4.90e-08 | 78 |
trunk | 5.96e-08 | 199 |
coronary artery | 9.34e-08 | 3 |
stratified squamous epithelium | 1.03e-07 | 3 |
layer of synovial tissue | 1.03e-07 | 3 |
synovial joint | 1.03e-07 | 3 |
synovial membrane of synovial joint | 1.03e-07 | 3 |
multilaminar epithelium | 1.96e-07 | 83 |
dermal papilla | 2.13e-07 | 3 |
papillary layer of dermis | 2.13e-07 | 3 |
unilaminar epithelium | 7.08e-07 | 148 |
vessel | 9.62e-07 | 68 |