FFCP PHASE1:Hg19::chr11:118087684..118087694,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_at_chr11:118087684..118087694,- | |||
|id=chr11:118087684..118087694,- | |||
|ontology_enrichment_celltype=CL:0000990!4.88e-32!8;CL:0000451!3.78e-26!10;CL:0000840!5.20e-22!5;CL:0001029!5.20e-22!5;CL:0002032!5.49e-16!165;CL:0000837!5.49e-16!165;CL:0000988!7.37e-16!182;CL:0000453!2.48e-15!5;CL:0000738!2.50e-15!140;CL:0000037!3.38e-15!172;CL:0000566!3.38e-15!172;CL:0002031!1.27e-13!124;CL:0002087!2.25e-12!119;CL:0000763!1.42e-11!112;CL:0000049!1.42e-11!112;CL:0002009!9.24e-11!65;CL:0000557!9.92e-10!71;CL:0002194!5.76e-09!63;CL:0000576!5.76e-09!63;CL:0000040!5.76e-09!63;CL:0000559!5.76e-09!63;CL:0000839!5.99e-08!70;CL:0000766!3.17e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000235;9.08e-34;6!CL:0001014;7.14e-26;2!CL:0001016;7.14e-26;2!CL:0000453;3.26e-11;5!CL:0000840;1.44e-09;5!CL:0000990;8.37e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,8.35e-34,6;CL:0001014,7.14e-26,2;CL:0001016,7.14e-26,2;CL:0000453,3.26e-11,5;CL:0000840,1.44e-09,5;CL:0001029,1.44e-09,5;CL:0002009,4.50e-08,61;CL:0000557,1.96e-07,67;CL:0002031,2.26e-07,120;CL:0000990,8.37e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!8.68e-10!1;DOID:0060061!8.68e-10!1;DOID:8691!8.68e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.88e-50;1!DOID:0060061;1.88e-50;1!DOID:8691;1.88e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.42e-50,1;DOID:0060061,2.42e-50,1;DOID:8691,2.42e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!9.91e-10!112;UBERON:0002390!3.21e-09!102;UBERON:0003061!3.21e-09!102;UBERON:0002372!5.72e-09!1;UBERON:0001961!5.72e-09!1;UBERON:0001744!5.72e-09!1;UBERON:0001735!5.72e-09!1;UBERON:0002371!1.80e-08!80;UBERON:0002405!6.13e-08!115;UBERON:0001474!8.92e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.78612368903789,1.93220510975347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0,6.39959666735776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:118087684..118087694,- | |||
}} |
Revision as of 10:36, 11 January 2014
Short description: | p@chr11:118087684..118087694, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118087684..118087694, - |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 8.35e-34 | 6 |
CD1a-positive Langerhans cell | 7.14e-26 | 2 |
immature CD1a-positive Langerhans cell | 7.14e-26 | 2 |
Langerhans cell | 3.26e-11 | 5 |
immature conventional dendritic cell | 1.44e-09 | 5 |
common dendritic progenitor | 1.44e-09 | 5 |
macrophage dendritic cell progenitor | 4.50e-08 | 61 |
granulocyte monocyte progenitor cell | 1.96e-07 | 67 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
conventional dendritic cell | 8.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.42e-50 | 1 |
cutaneous T cell lymphoma | 2.42e-50 | 1 |
mycosis fungoides | 2.42e-50 | 1 |