FFCP PHASE1:Hg19::chr12:6658351..6658356,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=25900 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24970 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NWP4 | |||
|association_with_transcript=-12bp_to_ENST00000423501_5end | |||
|description=CAGE_peak_7_at_IFFO1_5end | |||
|id=chr12:6658351..6658356,- | |||
|ontology_enrichment_celltype=CL:0002087!1.41e-14!119;CL:0000738!2.03e-14!140;CL:0002031!4.80e-13!124;CL:0000037!2.45e-11!172;CL:0000566!2.45e-11!172;CL:0002032!7.26e-11!165;CL:0000837!7.26e-11!165;CL:0000988!9.39e-10!182;CL:0000766!4.89e-09!76;CL:0000839!5.95e-09!70;CL:0002194!1.08e-08!63;CL:0000576!1.08e-08!63;CL:0000040!1.08e-08!63;CL:0000559!1.08e-08!63;CL:0000557!1.45e-08!71;CL:0000219!5.07e-08!390;CL:0002009!6.62e-08!65;CL:0002057!3.52e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.72e-11;39!CL:0000234;1.72e-11;39!CL:0000860;6.97e-09;33!CL:0002057;6.97e-09;33!CL:0000135;2.66e-08;3!CL:0000388;2.66e-08;3!CL:0000576;4.05e-08;48!CL:0000235;3.22e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.10e-14,115;CL:0002194,3.09e-14,59;CL:0000576,3.09e-14,59;CL:0000040,3.09e-14,59;CL:0000559,3.09e-14,59;CL:0002009,1.41e-13,61;CL:0002031,1.36e-12,120;CL:0000473,2.44e-12,48;CL:0000234,2.44e-12,48;CL:0000839,4.14e-12,66;CL:0000557,7.65e-12,67;CL:0000738,4.79e-11,136;CL:0000766,1.26e-10,72;CL:0000037,1.11e-08,168;CL:0002032,1.20e-08,161;CL:0000837,1.20e-08,161;CL:0000135,2.03e-08,3;CL:0000388,2.03e-08,3;CL:0000860,2.51e-08,42;CL:0002057,2.51e-08,42;CL:0000988,8.33e-08,177;CL:0000235,3.81e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.65e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.27e-10!102;UBERON:0003061!5.27e-10!102;UBERON:0002193!4.86e-09!112;UBERON:0002371!1.28e-07!80;UBERON:0001474!3.73e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.66e-08;3!UBERON:0000043;2.66e-08;3!UBERON:0007845;2.66e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.20e-11,98;UBERON:0003061,1.20e-11,98;UBERON:0002371,9.12e-11,76;UBERON:0001474,1.27e-10,82;UBERON:0001434,3.78e-10,100;UBERON:0002193,6.65e-10,108;UBERON:0004765,3.87e-09,90;UBERON:0002405,1.43e-08,93;UBERON:0007846,2.03e-08,3;UBERON:0000043,2.03e-08,3;UBERON:0007845,2.03e-08,3;UBERON:0002204,7.94e-07,167 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0.313454721478088,0,0.821246550437305,0.376627918784408,0.0764134057479513,0.0821005894499457,0.236132343941038,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0,0.0774672005803016,0.426507697462265,0,0.553995408531877,0.601633342410425,1.73608696572681,1.79132379391939,0.647787332037959,1.28787783817093,4.21654892460738,4.1566353805769,2.18325655069035,1.16214518452842,2.87817521615278,0.619412741790207,0.28769239232215,1.5369642391746,0.47296445977717,0,0,1.35426486594342,2.82363509313907,1.63743690034707,0.674170453335254,0.918251677112708,0,0.639337125799041,4.61791820261403,4.78712778291916,0.852449501065388,0,0,0,2.00998932205395,2.08593167368081,0,0.605399502633369,0,0,0,0.637812899895131,0,0.898629049171961,0.901061357049038,0.48217676009124,0.285012743741249,0.19891667719909,0.547992461293902,0,1.63841583378639,0.889509253863555,0.426730222566507,0,1.72425731986345,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,1.17903228824749,0.616804496998528,0,0.32592226663359,1.4203434172042,0,0.445641827540694,0.589211814949674,0,0.270803863765016,1.0247305578054,1.30059347559878,1.64437904603676,0.552700035571697,0.289803085735052,0.593146252648242,0,1.04535523804977,0.339928028092699,1.14966148080576,0,0.253019692019503,1.27426165729639,0.651083453856419,0.950452044448374,0,0,0,0.236777252044017,0,1.00803371612366,1.06976078313403,2.60683926989038,0,0,0,0,1.00267582127178,2.17269778441236,0,0.973269740605272,0.472674085820339,0.221729397462564,0.175669571386252,0.458426764241994,0,0,1.9472843619281,0.870648686496336,2.52620124985844,0.238490624305342,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0.417989933073621,0.258416759169329,0.71153252537342,0,0.402829317109147,0,0.488124115096339,0,0,0.357198913136319,0.44905874525234,0.225222960966644,0,0,0.366403487860815,0,0,0,0.993943903390637,0.379891534993739,1.32409180813219,1.14734648299525,0,0,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,1.19558944441441,0.23486899728753,0.161872944368132,0,0.408308342509787,0.61417158655884,0.516628905878827,2.37600571456411,0.247266929278557,0,0,1.0100166837244,0.500474079487857,0,0,0.30648779579902,0,0.340296549480063,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0,0.257640540045629,0.18611685633159,2.19409231913646,0,0.504867548488229,0.276149695926898,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0.348581828608555,0,0.252320850875628,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,1.96565443335525,0,0.441463099414651,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0.462985512576611,0,0,0,3.69325509131096,0,2.37809859661965,0,0,0,0,0,0,0.492663237895943,0.264145302039678,0.621984346622316,0.864719720501769,0.50496973370552,0.571481048629521,0.763976851116555,0,0,1.02827492703324,0.901029173531752,1.42913216315289,0,0.43596006883328,0.07333828582095,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0.799266537048298,0.142977993658148,0,0,0.325736184293735,0,0,0.602878754119172,0,0.199945982364114,0,2.00902836572851,2.10833939483032,0,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0.784596007954691,0.788123040807709,2.80315847317372,1.92514554419623,0,0,0,0,0,0,0,0.414415513436035,0,0.500170521059677,0,1.03985430765404,0.892144943985809,1.10391690523754,0.585707074963566,0,0,0,0,0,0.260650843404249,0,0,0.206768026122887,2.80428461064202,0.960548020230999,0,0,0,0.248107807818777,1.38115775959256,0.841980283299221,0.256278298511402,0,0.804269605718038,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0.34444334449382,0.182091168006717,0.786746489756545,0,0.385076685522074,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.309123034943167,0.366277859273374,0.165018999841176,0.574265537996172,0,0,0.386682873168488,0,0.15350367472613,0,0.751941714077915,0.435050081742686,0.170453254832202,0.356128142586949,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0,0,0.359744915166629,0,0.942499218765491,0,0,0,0.975267478179181,0.974853958525138,0,0,0.424216295861138,0,0,1.32687795048244,0,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0,0,0,1.47775344708365,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,1.70894156152249,0.952927101831156,1.23408681925858,0.648473311192717,0,1.58625035258854,0.320472213382419,0.962479855263359,0.245040215981032,0.557409525377156,0.721346064882224,0.355709216742071,0.159426272728822,0.199579371432817,0.191505370132367,0.423347165447766,0.324621940274555,0.280797178113459,2.05411211129873,0.626719583092093,0,0,0.1605880751037,0.80719882876419,0,0,0,0.447352215784832,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.984685914873589,0.111308705022906,0.494411622680279,0.422250816255987,0.996239941255349,0.552567831062295,0.251932747854276,0.511343412510774,0.246169610922139,0.311039587661807,0,0,1.02314474045374,0.197286811273867,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,1.74962768029953,0,0,0,0,0.995213339381022,0.886642856860642,0.438770794307945,0,0.139423744278603,0.461701551022782,0,0,0,0.108647371922008,0,0,0,0,0.470940769185074,0.332423363800313,0,0,0,0.189753732724185,0,0,0,0,0.432777279484182,0,0.265372693510018,0,0.296521128680622,0.123563938946503,0.522109747527277,0.202203398942031,1.60515529459758,0.468528891450678,0.729819156862664,0,0.242780379534093,0,1.20990716048664,0,0.126373159256976,0.300646838828985,0.518440956986236,0,0,0,0,0,0,0,0,0.0870592065804026,0.52418000472609,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.596143835108969,0.189932387867636,0.195551382734803,0,0.640358984218058,0.19980960958213,0,0,0,0.14405479798815,0,0,0.543616824294456,0.104602846312333,0.203996435272644,0.288950589901519,0,0.136905378891993,0,0,0.525774708558629,0.279282401272254,0.687481272035051,0.717873024576814,0.599037001496973,1.28767814440971,0,0.201550417460179,0,0,0.315132729228895,0.576911008668165,0.539228350833479,0.295282444544246,0.508039992394707,0.795229689809303,0.817220436669454,0.321506296930038,0.275078873194468,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0.164185041498678,0.681552087141687,0.113312091520126,0,0,0.129282956361551,1.3223260174269,0,0,0,0,0.828478110694391,0.496166021811951,0.988058159489721,0.487170393523584,0,1.08803560673895,0,0,0,0,0,0.488105059607853,0.3755727921195,0,0.221858103073705,0.310482014706917,0.276697269872462,0.499921631848426,0.303298235083296,3.42558400253961,0.235265819698172,0,0,0.298509605773748,0,0,0.378806010550178,0.251567901752575,0,0,0.302461847526478,0,0,0.159296767163702,0.449803112163605,0,0.829412415681711,0,0.521745061811734,0.150257608997218,0,0,0.363697318405119,0.107410557042488,0,0.398095888698616,1.20008329398946,0.686791410365586,0.673498977531838,0,0.192619830407303,0.428883182749851,0,0.453411851024545,0.463044948647668,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0.192914038270915,0.337884881306145,0.512483037175893,0.345430341731199,0,0.414775308455192,0.584580926518165,0.132864840313363,0.163565394255844,0,0.245772908753719,0,0.19998739585493,0,1.03328987796489,0,1.28874165176289,0,0,0.383683113910955,1.29389773676018,0.314531883711793,0.655257829152084,1.18812770967818,0.637724760305049,1.61116493536703,0,0.318004350653419,0.394308725006267,0,1.76337971845342,0.3062454773532,0.192687675289379,0,0.798169295285756,0.615349092722265,0.504143392443436,0.276629009856872,1.13032951942296,0,0,0.11796972334774,0,0.115525666150338,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,0,0.781078098613847,1.86018116851066,0.380494861163441,0,0,1.48863353516788,0.175871244359621,0,0,0,0,0,0.0887023701626388,0.115233987555779,0.342976018874837,0.271878931907327,0.394636641377094,0,0,0,0.628462359664008,0,0.913158720509496,0.431855182437243,0.47775168788705,0.357382720883282,0,0.697448552208751,0.173858272302579,0,0.414432328326074,0.6828739083758,0,0,0.828324005113957,0.426067023795788,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0.154348316215889,0.874238242015829,0,1.22574160876953,0,0.196308467114945,0.297046400327086,0.4226557275834,0.169927114687817,0,0.193373663920732,0.599646935549574,0,0,0,0.730336388246517,0,1.00337708206016,0.315543124386369,0.271965960763659,0.436350690340377,1.0580536810308,1.48798007266701,3.23522940041993,3.8936390591141,0,0.109265571963696,0,0,0,0.643264296743914,0.50141507858475,0.151557396436479,0.267964130156178,1.65833887891756,0.930896962757057,0.426467963801962,0.476128862927481,0.193766729508018,0.0620747142958579,0,0.12729431655633,0.202117188958219,0,0,0.134704106029175,0.0717222053926763,1.33064142618405,0,0,1.9307228228694,0,2.34640942403454,0,0,1.33151354837103,0.603821380773079,0.641136984606466 | |||
|short_description=p7@IFFO1 | |||
}} |
Revision as of 11:42, 11 January 2014
Short description: | p7@IFFO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_IFFO1_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000423501_5end |
EntrezGene: | IFFO1 |
HGNC: | 24970 |
UniProt: | Q9NWP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.10e-14 | 115 |
monopoietic cell | 3.09e-14 | 59 |
monocyte | 3.09e-14 | 59 |
monoblast | 3.09e-14 | 59 |
promonocyte | 3.09e-14 | 59 |
macrophage dendritic cell progenitor | 1.41e-13 | 61 |
hematopoietic lineage restricted progenitor cell | 1.36e-12 | 120 |
defensive cell | 2.44e-12 | 48 |
phagocyte | 2.44e-12 | 48 |
myeloid lineage restricted progenitor cell | 4.14e-12 | 66 |
granulocyte monocyte progenitor cell | 7.65e-12 | 67 |
leukocyte | 4.79e-11 | 136 |
myeloid leukocyte | 1.26e-10 | 72 |
hematopoietic stem cell | 1.11e-08 | 168 |
hematopoietic oligopotent progenitor cell | 1.20e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-08 | 161 |
fibrocyte | 2.03e-08 | 3 |
tendon cell | 2.03e-08 | 3 |
classical monocyte | 2.51e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.51e-08 | 42 |
hematopoietic cell | 8.33e-08 | 177 |
macrophage | 3.81e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.20e-11 | 98 |
blood island | 1.20e-11 | 98 |
bone marrow | 9.12e-11 | 76 |
bone element | 1.27e-10 | 82 |
skeletal system | 3.78e-10 | 100 |
hemolymphoid system | 6.65e-10 | 108 |
skeletal element | 3.87e-09 | 90 |
immune system | 1.43e-08 | 93 |
dense regular connective tissue | 2.03e-08 | 3 |
tendon | 2.03e-08 | 3 |
regular connective tissue | 2.03e-08 | 3 |
musculoskeletal system | 7.94e-07 | 167 |