FFCP PHASE1:Hg19::chr12:6730144..6730153,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=57121 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13307 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H1C0 | |||
|association_with_transcript=260bp_to_AJ272207,CU689654_5end | |||
|description=CAGE_peak_12_at_LPAR5_5end | |||
|id=chr12:6730144..6730153,- | |||
|ontology_enrichment_celltype=CL:0002274!4.95e-12!5;CL:0000457!4.95e-12!5;CL:0002191!4.95e-12!5;CL:0000097!4.95e-12!5;CL:0000831!4.95e-12!5;CL:0002028!4.95e-12!5;CL:0000349!1.99e-11!3;CL:0002577!1.99e-11!3;CL:0002621!6.71e-11!3;CL:1000415!3.09e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.77e-125;5!CL:0000163;4.03e-70;9!CL:0000151;4.32e-18;36!CL:0002577;1.31e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.26e-125,5;CL:0002028,3.26e-125,5;CL:0000163,4.41e-70,9;CL:0000151,3.28e-18,36;CL:0002577,1.22e-14,3;CL:0000839,4.06e-10,66;CL:0000557,5.60e-10,67;CL:0000766,2.44e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!6.71e-11!3;UBERON:0001723!1.39e-10!3;UBERON:0001033!1.39e-10!3;UBERON:0010056!1.39e-10!3;UBERON:0002110!2.92e-10!3;UBERON:0006242!2.92e-10!3;UBERON:0001987!1.17e-08!4;UBERON:0004340!1.17e-08!4;UBERON:0006562!3.33e-07!11;UBERON:0000166!9.01e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.66e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.53e-11,4;UBERON:0004340,2.53e-11,4;UBERON:0002371,6.93e-09,76;UBERON:0001474,2.75e-08,82;UBERON:0004765,1.31e-07,90;UBERON:0002405,2.19e-07,93;UBERON:0002390,4.84e-07,98;UBERON:0003061,4.84e-07,98;UBERON:0003124,5.08e-07,7;UBERON:0001434,6.51e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0.445641827540694,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23267807618516,1.65862492432618,1.58531948758658,3.1560608356595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,3.32870879020994,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0,0,0,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | |||
|short_description=p12@LPAR5 | |||
}} |
Revision as of 11:42, 11 January 2014
Short description: | p12@LPAR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_LPAR5_5end |
Coexpression cluster: | NA |
Association with transcript: | 260bp_to_AJ272207, CU689654_5end |
EntrezGene: | LPAR5 |
HGNC: | 13307 |
UniProt: | Q9H1C0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.26e-125 | 5 |
basophil mast progenitor cell | 3.26e-125 | 5 |
endocrine cell | 4.41e-70 | 9 |
secretory cell | 3.28e-18 | 36 |
placental epithelial cell | 1.22e-14 | 3 |
myeloid lineage restricted progenitor cell | 4.06e-10 | 66 |
granulocyte monocyte progenitor cell | 5.60e-10 | 67 |
myeloid leukocyte | 2.44e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
placenta | 2.53e-11 | 4 |
allantois | 2.53e-11 | 4 |
bone marrow | 6.93e-09 | 76 |
bone element | 2.75e-08 | 82 |
skeletal element | 1.31e-07 | 90 |
immune system | 2.19e-07 | 93 |
hematopoietic system | 4.84e-07 | 98 |
blood island | 4.84e-07 | 98 |
chorion | 5.08e-07 | 7 |
skeletal system | 6.51e-07 | 100 |