FFCP PHASE1:Hg19::chr12:13368443..13368460,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:13368443..13368460,+ | |||
|id=chr12:13368443..13368460,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.78e-14!180;CL:0000057!4.53e-13!75;CL:0002371!3.59e-08!591;CL:0000048!1.63e-07!430;CL:0000723!2.35e-07!436;CL:0002620!4.62e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.70e-10;39!CL:0000234;7.70e-10;39!CL:0000860;6.37e-08;33!CL:0002057;6.37e-08;33!CL:0002570;7.11e-07;8!CL:0002620;9.13e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.79e-15,427;CL:0000723,3.86e-15,433;CL:0000034,2.95e-14,441;CL:0000134,1.80e-11,354;CL:0002320,9.64e-11,361;CL:0000219,2.43e-10,386;CL:0000057,9.27e-10,76;CL:0000473,1.98e-08,48;CL:0000234,1.98e-08,48;CL:0002570,2.49e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.77e-10!659;UBERON:0000467!4.48e-09!625;UBERON:0000480!6.46e-09!626;UBERON:0000926!3.24e-08!448;UBERON:0004120!3.24e-08!448;UBERON:0006603!3.24e-08!448;UBERON:0003102!3.57e-07!95;UBERON:0004923!4.72e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.65e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.06e-10,371;UBERON:0000926,1.21e-07,315;UBERON:0004120,1.21e-07,315;UBERON:0006603,1.21e-07,315;UBERON:0002199,1.63e-07,46;UBERON:0002416,1.63e-07,46;UBERON:0001013,2.44e-07,14 | |||
|phase1_expression=1.63510541343501,3.42560838225573,0.704772020479856,4.00293193412522,1.34088328328186,5.23403114460221,0,1.26343974685366,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0.495065411840187,0.331397375727916,2.01697543935533,1.20538905604795,1.46062018077475,2.92759679274304,0.369363174230364,0.204000691244253,0,0.85870796139317,0.958120975510189,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,1.30858414901608,1.51150377475524,0.727752183563449,0.697287110717054,0.822335776043652,2.78735733805593,9.20615655430881,2.30544635876191,3.54723344832878,2.06847408441971,0,0,1.69418105588344,0.272906150057846,0.449446968890169,1.83650335422542,0,2.55734850319616,2.30895910130701,1.59570926097305,1.27867425159808,3.77272010217159,0,0.622822248995575,10.5524439407832,6.77927793946262,3.04064382587163,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,1.34140171940727,0.511450247374121,1.44575660953827,0,1.88300474649071,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0.419499436209906,2.20094433552054,0.417989933073621,1.55050055501597,0.71153252537342,0.33472061276467,1.20848795132744,1.52054421143703,0.732186172644509,2.20597848207521,3.24056779152704,0.625098097988558,0,0.788280363383256,0,0,1.46561395144326,0,0,0,1.98788780678127,0.633152558322899,0.794455084879313,3.44203944898576,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.404132016209064,1.9615428373615,0,0.576175924479999,0.234321431833797,1.24864030732128,0,5.08125513876124,1.17434498643765,2.26622122115384,0.842704840213491,3.47062091133319,1.84251475967652,0.309977343527296,3.56400857184616,4.94533858557114,0,0,1.0100166837244,0.750711119231785,0.277064115484183,0,0.919463387397059,1.95309476578576,1.13432183160021,1.4351170855109,1.06778694409284,2.33125091275518,1.80054657650641,1.64884046781502,0.515281080091258,0.558350568994769,1.68776332241266,0.292311015483596,1.51460264546469,1.10459878370759,1.2931684545505,1.42003837006646,0.705264687593482,0.67824236924195,0.57978255948989,0,0,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,5.10804720835177,3.60939740834793,0,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0.269662616320329,0,0,0.738155454624648,0,0,1.47008711385542,1.26755034821831,0,0.590789906681404,0,0,0,0.109750285408626,0,1.50793458617446,0.277765335475589,0.325808305310325,1.03993478527958,1.44331342025273,0.34779121492523,0,0.721832238805369,0.925971025153221,1.90254152234598,0,0,1.72351904261178,0.468008530278475,1.0404181360211,0,0,0,0.179117045405697,0.581267877027924,0,0,0,0,0,0.12624243342638,0.888970520090367,1.14596527667483,0,0,2.15937734676979,1.50171528921959,0.571652865261156,0.112131084345361,0.43596006883328,0.22001485746285,0,0,2.535908257668,0.531876233169741,3.12022310734098,1.28603687131071,0,0.266422179016099,0.142977993658148,0.542621605391443,0,2.93162565864362,0,0,0.301439377059586,0,0.299918973546171,8.51366464488333,2.51128545716063,10.5416969741516,0.718874566474748,1.14861935834114,0,2.02693829334611,2.67119219315498,0.179060963239896,0,0,0,0,0.508189248444927,0,5.41302168944387,0.502548796003046,6.37938751653163,0,0,0,0.736148950314839,0.500170521059677,0.271265023699736,0.623912584592421,7.13715955188647,1.26161932027148,1.05427273493442,0.300946099727719,0,0,1.99267679560631,0,1.39013783148933,0,0,0,0,0,1.21251028578504,1.66435439510497,0.30239029332968,1.24053903909388,0.306923946576125,1.12264037773229,0.768834895534206,0,0.965123526861645,1.48418066444991,2.62156479464514,1.9531789784444,0.821271560138091,2.59627214591811,4.18357362455853,0,0,0.276242966807689,0.459257792658427,1.82091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,2.04112446331819,0.431831832204279,0,0,0.501689773854853,0.764628819135115,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,1.6068392984416,0.676695028044854,3.69716681075147,2.6095624703442,2.06754858726796,0.966782203814463,1.59518363305651,1.27839941124151,0.178064071293475,0,0,0,0,1.39453664789186,0.94443704049192,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0,0.632758849437452,0.190630193923825,0,1.71175595213568,0.318203247925937,0,0.539617372749944,0.823611089208164,0.706874414074119,0.202182481573316,0,0.421258456238981,0,2.68084838594413,1.05650146756755,0.545999645631943,0.141405431953713,1.13008116620243,0,0.66343897524122,0,0.578775534266688,1.9676842561399,0,0.6196469961995,0.281695602532241,0.286822704408103,0.196498082026242,0,0.709522128141196,3.16661452946496,4.93942339439853,0.379473173765715,0,0,0,0,0.188287601553558,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,3.73884248946156,2.88743956579008,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714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| |||
|short_description=p@chr12:13368443..13368460,+ | |||
}} |
Revision as of 12:21, 11 January 2014
Short description: | p@chr12:13368443..13368460, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13368443..13368460, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.79e-15 | 427 |
somatic stem cell | 3.86e-15 | 433 |
stem cell | 2.95e-14 | 441 |
mesenchymal cell | 1.80e-11 | 354 |
connective tissue cell | 9.64e-11 | 361 |
motile cell | 2.43e-10 | 386 |
fibroblast | 9.27e-10 | 76 |
defensive cell | 1.98e-08 | 48 |
phagocyte | 1.98e-08 | 48 |
mesenchymal stem cell of adipose | 2.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.06e-10 | 371 |
mesoderm | 1.21e-07 | 315 |
mesoderm-derived structure | 1.21e-07 | 315 |
presumptive mesoderm | 1.21e-07 | 315 |
integument | 1.63e-07 | 46 |
integumental system | 1.63e-07 | 46 |
adipose tissue | 2.44e-07 | 14 |