FFCP PHASE1:Hg19::chr12:52908696..52908709,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52908696..52908709,- | |||
|id=chr12:52908696..52908709,- | |||
|ontology_enrichment_celltype=CL:0002076!5.51e-33!43;CL:0000223!6.19e-24!59;CL:0000066!8.22e-22!254;CL:0002368!9.29e-20!13;CL:0002159!2.72e-19!13;CL:0002251!1.16e-18!21;CL:0000622!2.44e-14!5;CL:0000154!7.20e-12!6;CL:0000076!2.26e-11!62;CL:0000244!2.55e-11!4;CL:0000731!2.55e-11!4;CL:0002202!8.81e-11!9;CL:0002632!8.81e-11!9;CL:0002623!1.30e-09!3;CL:0000068!3.77e-09!3;CL:0000069!3.77e-09!3;CL:0002328!3.77e-09!3;CL:0000307!3.77e-09!3;CL:0000377!3.77e-09!3;CL:0002077!4.10e-09!33;CL:0002621!4.44e-09!3;CL:0000362!1.79e-08!8;CL:0002166!2.09e-08!3;CL:0000240!8.02e-08!6;CL:0000311!8.02e-08!6;CL:0000079!8.02e-08!6;CL:0000237!8.02e-08!6;CL:0000036!8.02e-08!6;CL:0000357!8.02e-08!6;CL:0000114!8.02e-08!6;CL:0000150!9.52e-08!9;CL:0000220!1.89e-07!246;CL:0002321!2.57e-07!248;CL:0000575!5.96e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.05e-29;13!CL:0002076;2.34e-29;42!CL:0002159;5.57e-22;14!CL:0000244;3.05e-16;4!CL:0000731;3.05e-16;4!CL:0002202;9.45e-16;9!CL:0002632;9.45e-16;9!CL:0002251;2.34e-15;20!CL:0000622;3.41e-14;5!CL:0002623;1.20e-13;3!CL:0002328;7.16e-13;3!CL:0000307;8.08e-13;3!CL:0002621;8.76e-13;3!CL:0002166;6.79e-12;3!CL:0000154;7.85e-12;6!CL:0000240;2.21e-11;6!CL:0000311;2.21e-11;6!CL:0000079;2.21e-11;6!CL:0000237;2.21e-11;6!CL:0002077;2.20e-10;34!CL:0000575;1.12e-09;2!CL:0002327;1.89e-09;4!CL:0000312;5.85e-08;5!CL:0000150;6.97e-08;9!CL:0000362;1.33e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.54e-38,42;CL:0002368,1.47e-29,13;CL:0000223,4.94e-26,58;CL:0002159,6.58e-22,14;CL:0000066,1.85e-21,253;CL:0000244,3.00e-16,4;CL:0000731,3.00e-16,4;CL:0002202,6.22e-16,9;CL:0002632,6.22e-16,9;CL:0002251,2.11e-15,20;CL:0000622,3.25e-14,5;CL:0002623,1.11e-13,3;CL:0000068,5.51e-13,3;CL:0000069,5.51e-13,3;CL:0002328,5.51e-13,3;CL:0000307,5.51e-13,3;CL:0000377,5.51e-13,3;CL:0002621,7.03e-13,3;CL:0002077,6.23e-12,34;CL:0002166,7.20e-12,3;CL:0000154,7.54e-12,6;CL:0000240,2.53e-11,6;CL:0000311,2.53e-11,6;CL:0000079,2.53e-11,6;CL:0000237,2.53e-11,6;CL:0000036,2.53e-11,6;CL:0000357,2.53e-11,6;CL:0000114,2.53e-11,6;CL:0002321,8.97e-10,250;CL:0000575,1.10e-09,2;CL:0002327,2.13e-09,4;CL:0000312,6.59e-08,5;CL:0000150,6.80e-08,9;CL:0000362,1.46e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;5.33e-14;58!CL:0000377;8.08e-13;3!CL:0000357;2.21e-11;6!CL:0000114;2.21e-11;6 | |||
|ontology_enrichment_disease=DOID:1749!3.05e-15!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!2.65e-19!72;UBERON:0000166!3.87e-18!21;UBERON:0000165!3.48e-15!28;UBERON:0000930!3.48e-15!28;UBERON:0004119!4.37e-15!169;UBERON:0000925!4.37e-15!169;UBERON:0006595!4.37e-15!169;UBERON:0000161!4.92e-15!35;UBERON:0000365!3.59e-13!5;UBERON:0003102!4.13e-13!95;UBERON:0003729!2.06e-12!5;UBERON:0000065!2.97e-11!53;UBERON:0007196!3.85e-11!14;UBERON:0001558!3.85e-11!14;UBERON:0005910!6.55e-11!6;UBERON:0000974!1.28e-10!10;UBERON:0001444!2.88e-10!48;UBERON:0003343!9.31e-10!4;UBERON:0004785!9.31e-10!4;UBERON:0003126!2.48e-09!7;UBERON:0001005!2.48e-09!7;UBERON:0004815!3.77e-09!3;UBERON:0002031!3.77e-09!3;UBERON:0001949!4.44e-09!3;UBERON:0000344!4.78e-09!12;UBERON:0001723!6.33e-08!3;UBERON:0001033!6.33e-08!3;UBERON:0010056!6.33e-08!3;UBERON:0005631!6.36e-08!14;UBERON:0000158!6.36e-08!14;UBERON:0001007!7.80e-08!155;UBERON:0001555!7.80e-08!155;UBERON:0007026!7.80e-08!155;UBERON:0000072!1.42e-07!46;UBERON:0005178!3.35e-07!34;UBERON:0002224!3.35e-07!34;UBERON:0002185!6.18e-07!4;UBERON:0005181!6.26e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.66e-15;12!UBERON:0000365;5.13e-13;5!UBERON:0004815;7.16e-13;3!UBERON:0002031;7.16e-13;3!UBERON:0001949;8.76e-13;3!UBERON:0005910;7.33e-11;6!UBERON:0000165;2.19e-10;28!UBERON:0000161;9.84e-10;19!UBERON:0000166;9.84e-10;19!UBERON:0001911;1.89e-09;4!UBERON:0007196;3.46e-09;15!UBERON:0001558;3.46e-09;15!UBERON:0001708;4.84e-09;4!UBERON:0008895;4.84e-09;4!UBERON:0002185;6.82e-08;5!UBERON:0003729;1.25e-07;13!UBERON:0005911;1.68e-07;36!UBERON:0001041;2.48e-07;14!UBERON:0011159;2.54e-07;5!UBERON:0010371;4.30e-07;31!UBERON:0001044;5.18e-07;6!UBERON:0003293;5.18e-07;6!UBERON:0003294;5.18e-07;6!UBERON:0010047;5.18e-07;6!UBERON:0003408;5.18e-07;6!UBERON:0000167;5.18e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.79e-14,99;UBERON:0001004,1.49e-13,74;UBERON:0004119,5.02e-13,160;UBERON:0000925,5.02e-13,160;UBERON:0006595,5.02e-13,160;UBERON:0000365,5.05e-13,5;UBERON:0004815,5.51e-13,3;UBERON:0002031,5.51e-13,3;UBERON:0001949,7.03e-13,3;UBERON:0000033,4.27e-11,56;UBERON:0005910,7.25e-11,6;UBERON:0000166,9.44e-11,22;UBERON:0000165,5.36e-10,29;UBERON:0000930,5.36e-10,29;UBERON:0000153,1.01e-09,62;UBERON:0007811,1.01e-09,62;UBERON:0000161,2.09e-09,36;UBERON:0001911,2.13e-09,4;UBERON:0005333,2.13e-09,4;UBERON:0008425,2.13e-09,4;UBERON:0005311,2.13e-09,4;UBERON:0007196,2.72e-09,15;UBERON:0001558,2.72e-09,15;UBERON:0001708,5.06e-09,4;UBERON:0008895,5.06e-09,4;UBERON:0001444,4.71e-08,49;UBERON:0002185,5.85e-08,5;UBERON:0003729,1.18e-07,13;UBERON:0011159,2.63e-07,5;UBERON:0001044,4.98e-07,6;UBERON:0003293,4.98e-07,6;UBERON:0003294,4.98e-07,6;UBERON:0010047,4.98e-07,6;UBERON:0000167,4.98e-07,6;UBERON:0000065,6.81e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,6.6265302131215,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82872461268068,10.7527488407485,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15797509499322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70565194428616,4.09119180886252,3.72845974005705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.12152112023829,1.1240175325762,6.73544115157927,12.1290863157674,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,1.17587489739202,2.41017665312057,1.52249488594842,3.19697332365358,3.06706143332169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33440328590885,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,3.59115856849996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,15.6014459048765,0,0,0,0,0,0,0,0,0,2.64455864577565,3.0750410778417,4.72167036229961,4.046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94510662174599,3.35151137767894,3.26672954583968,0,3.01353760869861,1.68471475667626,8.86860307073351,2.75668080248351,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,1.22864280839693,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,3.06732237412927,0.0769502585037971,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0.34823682632161,0,0,0,0,0,2.81268147816416,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36695500158826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08801447160972,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39879507719444,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.11796972334774,2.56800037930351,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97318793991288,7.34089451503985,15.8989722217241,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0.193766729508018,0,0,0,0,3.26575121845442,0.342233301085281,0.336760265072938,0.430333232356058,0.665320713092027,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:52908696..52908709,- | |||
}} |
Revision as of 13:36, 11 January 2014
Short description: | p@chr12:52908696..52908709, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52908696..52908709, - |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 1.79e-14 | 99 |
respiratory system | 1.49e-13 | 74 |
endoderm-derived structure | 5.02e-13 | 160 |
endoderm | 5.02e-13 | 160 |
presumptive endoderm | 5.02e-13 | 160 |
urothelium | 5.05e-13 | 5 |
lower respiratory tract epithelium | 5.51e-13 | 3 |
epithelium of bronchus | 5.51e-13 | 3 |
gingival epithelium | 7.03e-13 | 3 |
head | 4.27e-11 | 56 |
transitional epithelium | 7.25e-11 | 6 |
oral opening | 9.44e-11 | 22 |
mouth | 5.36e-10 | 29 |
stomodeum | 5.36e-10 | 29 |
anterior region of body | 1.01e-09 | 62 |
craniocervical region | 1.01e-09 | 62 |
orifice | 2.09e-09 | 36 |
mammary gland | 2.13e-09 | 4 |
mammary bud | 2.13e-09 | 4 |
mammary ridge | 2.13e-09 | 4 |
mammary placode | 2.13e-09 | 4 |
tracheobronchial tree | 2.72e-09 | 15 |
lower respiratory tract | 2.72e-09 | 15 |
jaw skeleton | 5.06e-09 | 4 |
splanchnocranium | 5.06e-09 | 4 |
subdivision of head | 4.71e-08 | 49 |
bronchus | 5.85e-08 | 5 |
mouth mucosa | 1.18e-07 | 13 |
primary subdivision of cranial skeletal system | 2.63e-07 | 5 |
saliva-secreting gland | 4.98e-07 | 6 |
gland of oral region | 4.98e-07 | 6 |
gland of foregut | 4.98e-07 | 6 |
oral gland | 4.98e-07 | 6 |
oral cavity | 4.98e-07 | 6 |
respiratory tract | 6.81e-07 | 54 |